HHsearch alignment for GI: 254780229 and conserved domain: smart00763
>smart00763 AAA_PrkA PrkA AAA domain. This is a family of PrkA bacterial and archaeal serine kinases approximately 630 residues long. This is the N-terminal AAA domain.
Probab=96.09 E-value=0.0053 Score=46.28 Aligned_cols=25 Identities=28% Similarity=0.511 Sum_probs=22.0
Q ss_pred CCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 95599428787703899999999996
Q gi|254780229|r 420 KNLIIEGPPGTGKSQTITNIIAAAML 445 (1775)
Q Consensus 420 ~~~vi~GPPGTGKSQTIaNlIa~~la 445 (1775)
T Consensus 79 ~IllL~GPvGsGKS-tl~~~Lk~~lE 103 (361)
T smart00763 79 QILYLLGPVGGGKS-SLVECLKRGLE 103 (361)
T ss_pred EEEEEECCCCCCHH-HHHHHHHHHHH
T ss_conf 69999889988779-99999999999