HHsearch alignment for GI: 254780230 and conserved domain: pfam02325

>pfam02325 YGGT YGGT family. This family consists of a repeat found in conserved hypothetical integral membrane proteins. The function of this region and the proteins which possess it is unknown.

Probab=99.81  E-value=6.7e-20  Score=124.84  Aligned_cols=74  Identities=41%  Similarity=0.665  Sum_probs=64.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             99999999999999999998635887876548999999999999778999999862765775532017999999999999
Q gi|254780230|r    8 LLLLLELYANIVITRIVFSFLYTYDIINPLNFFVQTARQLLYSFTEPFLIPIRRFTPSLGVEWKRIDLSPIILLTVIYIL   87 (96)
Q Consensus         8 l~~~l~iy~~~li~rvIlsW~~~f~~~n~~n~~v~~i~~~l~~lTeP~L~piRr~iPplg~g~~giDlSpiv~~l~l~~l   87 (96)
T Consensus         1 l~~~l~i~~~~iiir~ilsW~~~-~~~---~~----~~~~i~~~teP~l~p~Rr~iP~~g----giD~Spiv~~~~l~~l   68 (75)
T pfam02325         1 LSTLLNIYIFLLIIRVILSWVPA-DPY---NP----IVQFLYRLTEPLLRPFRRVIPPIG----GIDLSPIVAFLLLQFL   68 (75)
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCC-CCC---CC----HHHHHHHHHHHHHHHHHHHCCCCC----CCCHHHHHHHHHHHHH
T ss_conf             98699999999999999996677-888---86----999999987988999998778967----6559999999999999


Q ss_pred             HHHHHH
Q ss_conf             999998
Q gi|254780230|r   88 QCFLKF   93 (96)
Q Consensus        88 ~~~l~~   93 (96)
T Consensus        69 ~~~l~~   74 (75)
T pfam02325        69 QILLLG   74 (75)
T ss_pred             HHHHHC
T ss_conf             999714