Query gi|254780231|ref|YP_003064644.1| hypothetical protein CLIBASIA_00580 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 98
No_of_seqs 104 out of 559
Neff 5.4
Searched_HMMs 23785
Date Mon May 23 21:43:59 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780231.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n91_A ORF, hypothetical prote 99.9 6E-24 2.5E-28 162.5 6.3 84 2-92 15-101 (108)
2 1jrm_A MTH0637, conserved hypo 99.9 3.6E-23 1.5E-27 157.9 6.0 85 2-94 14-99 (104)
3 1t6a_A Rbstp2229 gene product; 70.0 2.8 0.00012 21.5 3.0 37 29-69 77-118 (126)
4 1hfo_A Migration inhibitory fa 63.4 7.2 0.0003 19.1 4.0 59 4-70 37-100 (113)
5 3b64_A Macrophage migration in 60.5 5 0.00021 20.0 2.7 58 4-69 38-100 (112)
6 2wkb_A Macrophage migration in 60.3 6.3 0.00027 19.4 3.2 62 4-73 38-104 (125)
7 3djh_A Macrophage migration in 59.5 8.3 0.00035 18.7 3.7 59 4-70 37-100 (114)
8 1uiz_A MIF, macrophage migrati 58.2 10 0.00042 18.2 4.0 58 4-69 38-100 (115)
9 3hrd_B Nicotinate dehydrogenas 54.9 12 0.0005 17.8 6.2 48 29-76 33-80 (330)
10 2w3s_B Xanthine dehydrogenase; 54.3 12 0.00051 17.7 5.0 46 29-74 476-521 (777)
11 3fwu_A Macrophage migration in 54.1 12 0.00052 17.7 4.6 57 4-68 59-120 (133)
12 2os5_A Acemif; macrophage migr 48.2 15 0.00063 17.2 3.5 60 4-71 38-102 (119)
13 3fwt_A Macrophage migration in 45.1 17 0.00072 16.9 4.1 57 4-68 59-120 (133)
14 2xcz_A Possible ATLS1-like lig 40.4 20 0.00085 16.4 4.0 60 4-71 38-102 (115)
15 3nrz_C Xanthine dehydrogenase/ 40.0 21 0.00087 16.4 4.4 45 29-73 456-500 (756)
16 1dpt_A D-dopachrome tautomeras 39.9 21 0.00087 16.4 6.2 57 4-68 37-99 (117)
17 1szw_A TRNA pseudouridine synt 35.8 24 0.001 16.0 3.4 52 16-74 53-104 (379)
18 1mww_A Hypothetical protein HI 33.3 26 0.0011 15.7 3.4 48 26-73 54-106 (128)
19 1rm6_A 4-hydroxybenzoyl-COA re 29.1 31 0.0013 15.3 6.2 46 29-74 469-514 (769)
20 2kvr_A Ubiquitin carboxyl-term 27.9 28 0.0012 15.5 2.3 40 42-81 64-103 (130)
21 2ogh_A Eukaryotic translation 25.0 37 0.0016 14.9 2.4 70 3-93 25-95 (108)
22 2qsw_A Methionine import ATP-b 24.8 37 0.0016 14.8 3.1 58 31-95 25-89 (100)
23 1ffv_B CUTL, molybdoprotein of 21.8 43 0.0018 14.5 5.9 44 30-73 511-554 (803)
24 2x4k_A 4-oxalocrotonate tautom 21.4 44 0.0018 14.4 3.2 25 46-70 23-47 (63)
25 1v97_A XD, xanthine dehydrogen 21.2 44 0.0019 14.4 4.4 45 29-73 1026-1070(1332)
No 1
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, protein structure initiative, NESG; NMR {Escherichia coli O157} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=99.89 E-value=6e-24 Score=162.47 Aligned_cols=84 Identities=24% Similarity=0.336 Sum_probs=74.4
Q ss_pred EEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEEEEEECC
Q ss_conf 05999994186653023101456667776799999638767978899999999982998444799835577806999829
Q gi|254780231|r 2 CNVIVRLIPNAKKSGIASLEIPKDTSDTIHMKIKVTATPQKGKANKAMLAMLAKKLALSKSSLRMLSKQSSPLKIIYIDK 81 (98)
Q Consensus 2 ~~i~v~V~P~a~~~~I~g~~~~~d~~~~~~lkv~v~ApPv~GkAN~ali~~Lak~l~v~ks~I~I~~G~~sr~K~i~I~~ 81 (98)
+.|.|+|+|||++++|.|+ |+++|+|+|+|||+||+||++|++|||++|++|+|+|+|++|++||.|+++|.+
T Consensus 15 ~~i~v~V~P~A~~~~I~~~-------~~~~lkV~v~app~~GkAN~ali~~LAk~l~v~ks~I~Iv~G~tSr~K~i~I~~ 87 (108)
T 1n91_A 15 LVLRLYIQPKASRDSIVGL-------HGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIIN 87 (108)
T ss_dssp EEEEEEEECSSSSCEEEEE-------CSSCEEEECCCCSSHHHHHHHHHHHHHHHTCCCTTTEEESSCTTSSEEEEEEES
T ss_pred EEEEEEEEECCCCCCCCCC-------CCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCEEEEEC
T ss_conf 9999999759873410455-------188799999659978707999999999995997001899863777862899927
Q ss_pred CH---HHHHHHHHH
Q ss_conf 98---999999975
Q gi|254780231|r 82 DC---KEITELLQN 92 (98)
Q Consensus 82 ~~---~~i~~~L~~ 92 (98)
.. +++.+.|..
T Consensus 88 ~~~~~~~i~~ll~~ 101 (108)
T 1n91_A 88 PQQIPPEVAALINL 101 (108)
T ss_dssp CCCCCHHHHCCCCC
T ss_pred CCCCHHHHHHHHHH
T ss_conf 55398999999864
No 2
>1jrm_A MTH0637, conserved hypothetical protein MTH637; alpha-beta protein, structural genomics, OCSP, NESG; NMR {Methanothermobacterthermautotrophicus} SCOP: d.206.1.1
Probab=99.88 E-value=3.6e-23 Score=157.87 Aligned_cols=85 Identities=25% Similarity=0.352 Sum_probs=77.0
Q ss_pred EEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEEEEEECC
Q ss_conf 05999994186653023101456667776799999638767978899999999982998444799835577806999829
Q gi|254780231|r 2 CNVIVRLIPNAKKSGIASLEIPKDTSDTIHMKIKVTATPQKGKANKAMLAMLAKKLALSKSSLRMLSKQSSPLKIIYIDK 81 (98)
Q Consensus 2 ~~i~v~V~P~a~~~~I~g~~~~~d~~~~~~lkv~v~ApPv~GkAN~ali~~Lak~l~v~ks~I~I~~G~~sr~K~i~I~~ 81 (98)
+.|.|+|+|||++++|.|++ .|+++|+|+|+|||+||+||+||++|||++|+ |+|+|++|++||+|+++|.|
T Consensus 14 v~i~i~V~P~A~~~~i~g~~-----~~~~~lkv~v~apP~~GkAN~ali~~La~~lk---s~I~Iv~G~tSR~K~i~I~g 85 (104)
T 1jrm_A 14 LLVNIEVSPASGKFGIPSYN-----EWRKRIEVKIHSPPQKGKANREIIKEFSETFG---RDVEIVSGQKSRQKTIRIQG 85 (104)
T ss_dssp EEEEEESCCCSSSCCCCCCC-----TTTTCCCCCCCTTCCCCCHHHHHHHHHHHHHS---SEEEECSCGGGSEEEEEEES
T ss_pred EEEEEEEEECCCCCEEEEEC-----CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHC---CCEEEEECCCCCCCEEEECC
T ss_conf 99999997389753350050-----77987999995599787479999999999868---98899856877751899948
Q ss_pred -CHHHHHHHHHHHH
Q ss_conf -9899999997523
Q gi|254780231|r 82 -DCKEITELLQNND 94 (98)
Q Consensus 82 -~~~~i~~~L~~~~ 94 (98)
+.+++.+.|+..-
T Consensus 86 ~~~~~~~~~L~~~l 99 (104)
T 1jrm_A 86 MGRDLFLKLVSEKF 99 (104)
T ss_dssp CCHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHH
T ss_conf 99999999999986
No 3
>1t6a_A Rbstp2229 gene product; structural genomics, hypothetical protein, PSI, protein structure initiative; HET: MSE; 2.05A {Geobacillus stearothermophilus} SCOP: d.129.8.1
Probab=70.04 E-value=2.8 Score=21.50 Aligned_cols=37 Identities=35% Similarity=0.442 Sum_probs=25.1
Q ss_pred CCEEEEEEECCCC-----CCHHHHHHHHHHHHHHCCCHHHEEEEEC
Q ss_conf 7679999963876-----7978899999999982998444799835
Q gi|254780231|r 29 TIHMKIKVTATPQ-----KGKANKAMLAMLAKKLALSKSSLRMLSK 69 (98)
Q Consensus 29 ~~~lkv~v~ApPv-----~GkAN~ali~~Lak~l~v~ks~I~I~~G 69 (98)
++.--|.|.-|+. +|||| |.|+||||.|. ....+-.|
T Consensus 77 ~~~sfIqi~LP~~AThGDKgKAN-EfckfLAK~L~---geL~LFNG 118 (126)
T 1t6a_A 77 GEETFIDIALPPGATHGDKGKAN-EFSKWLAKTLG---GELHLFSG 118 (126)
T ss_dssp TTEEEEEEECCTTCCHHHHHHHH-HHHHHHHHHHC---EEEECTTS
T ss_pred CCEEEEEEECCCCCCCCCCHHHH-HHHHHHHHHHH---CEEEEECC
T ss_conf 85056999889998777622276-89999999741---01577538
No 4
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=63.41 E-value=7.2 Score=19.11 Aligned_cols=59 Identities=14% Similarity=0.120 Sum_probs=38.6
Q ss_pred EEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCC-CC----CHHHHHHHHHHHHHHCCCHHHEEEEECC
Q ss_conf 9999941866530231014566677767999996387-67----9788999999999829984447998355
Q gi|254780231|r 4 VIVRLIPNAKKSGIASLEIPKDTSDTIHMKIKVTATP-QK----GKANKAMLAMLAKKLALSKSSLRMLSKQ 70 (98)
Q Consensus 4 i~v~V~P~a~~~~I~g~~~~~d~~~~~~lkv~v~ApP-v~----GkAN~ali~~Lak~l~v~ks~I~I~~G~ 70 (98)
|.|.+.|+..-. ..| ..+....+.|++-. .+ .+..+++++||++.|+||+.+|-|..-.
T Consensus 37 vmV~v~~~~~m~-fgG-------s~~P~a~v~l~siG~l~~~~n~~~s~~l~~~l~~~LgI~~~RiyI~f~d 100 (113)
T 1hfo_A 37 VAVHINTDQQLS-FGG-------STNPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLGIPKNRMYIHFVN 100 (113)
T ss_dssp CEEEEECSCEEE-ETT-------BCSSCEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEE
T ss_pred EEEEECCCCCEE-ECC-------CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 899980897479-769-------8997799999995589978869999999999999849791649999997
No 5
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=60.46 E-value=5 Score=20.02 Aligned_cols=58 Identities=14% Similarity=0.116 Sum_probs=38.0
Q ss_pred EEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCC-----CCCHHHHHHHHHHHHHHCCCHHHEEEEEC
Q ss_conf 9999941866530231014566677767999996387-----67978899999999982998444799835
Q gi|254780231|r 4 VIVRLIPNAKKSGIASLEIPKDTSDTIHMKIKVTATP-----QKGKANKAMLAMLAKKLALSKSSLRMLSK 69 (98)
Q Consensus 4 i~v~V~P~a~~~~I~g~~~~~d~~~~~~lkv~v~ApP-----v~GkAN~ali~~Lak~l~v~ks~I~I~~G 69 (98)
+.|.+.|+..-. .. |..+.+.-+.|++-. ...+.-+++++||.+.|+||+.+|-|..-
T Consensus 38 vmv~v~~~~~m~-fg-------Gs~~P~a~~~v~siG~l~~~~n~~~s~~i~~~l~~~LgI~~~RiyI~f~ 100 (112)
T 3b64_A 38 VMMTFHDSTPMH-FF-------GSTDPVACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVLYF 100 (112)
T ss_dssp CEEEEECSCCCC-BT-------TBCSSCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEEEE
T ss_pred EEEEEECCCCEE-EC-------CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 999983794389-75-------8999779999999438897888999999999999985979673999998
No 6
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=60.33 E-value=6.3 Score=19.43 Aligned_cols=62 Identities=8% Similarity=0.115 Sum_probs=37.6
Q ss_pred EEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECC-----CCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCC
Q ss_conf 999994186653023101456667776799999638-----7679788999999999829984447998355778
Q gi|254780231|r 4 VIVRLIPNAKKSGIASLEIPKDTSDTIHMKIKVTAT-----PQKGKANKAMLAMLAKKLALSKSSLRMLSKQSSP 73 (98)
Q Consensus 4 i~v~V~P~a~~~~I~g~~~~~d~~~~~~lkv~v~Ap-----Pv~GkAN~ali~~Lak~l~v~ks~I~I~~G~~sr 73 (98)
|.|.+.|+..-. ..| ..+...-+.+++- ...-+.-++++++|.+.|+||+.+|-|..-...+
T Consensus 38 vmV~i~~~~~m~-fgG-------s~~P~a~v~i~sig~l~~~~n~~~s~~i~~~l~~~LgI~~~RiyI~f~~~~~ 104 (125)
T 2wkb_A 38 IMSNYDYQKNLR-FSG-------SNEGYCFVRLTSIGGINRSNNSLLADKITKILSNHLSVKPRRVYIEFRDCSA 104 (125)
T ss_dssp CEEEEEECTTCE-ETT-------BCSSCEEEEEECC-----CTHHHHHHHHHHHHHHHHCCCGGGEEEEEEC---
T ss_pred EEEEEECCCCEE-ECC-------CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCH
T ss_conf 999995685489-748-------8997699999994188846789999999999999719890228999997899
No 7
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* 3l5r_A* 3l5s_A* 3l5t_A* 3l5u_A* ...
Probab=59.53 E-value=8.3 Score=18.72 Aligned_cols=59 Identities=14% Similarity=0.182 Sum_probs=37.5
Q ss_pred EEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCC-CC----CHHHHHHHHHHHHHHCCCHHHEEEEECC
Q ss_conf 9999941866530231014566677767999996387-67----9788999999999829984447998355
Q gi|254780231|r 4 VIVRLIPNAKKSGIASLEIPKDTSDTIHMKIKVTATP-QK----GKANKAMLAMLAKKLALSKSSLRMLSKQ 70 (98)
Q Consensus 4 i~v~V~P~a~~~~I~g~~~~~d~~~~~~lkv~v~ApP-v~----GkAN~ali~~Lak~l~v~ks~I~I~~G~ 70 (98)
+.|.+.|+..-. ..| ..+...-+.|++.- .+ .+.-+++++||.+.|+||+.+|-|..-.
T Consensus 37 vmv~v~~~~~m~-fgG-------s~eP~a~~~l~sig~l~~~~n~~~s~~i~~~l~~~LgI~~~RiyI~f~~ 100 (114)
T 3djh_A 37 IAVHVVPDQLMA-FGG-------SSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYD 100 (114)
T ss_dssp CEEEEECSCEEE-ETT-------BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEE
T ss_pred EEEEEECCCCEE-ECC-------CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 899990897379-638-------8998799999994588903669999999999999859795749999997
No 8
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=58.20 E-value=10 Score=18.23 Aligned_cols=58 Identities=12% Similarity=0.169 Sum_probs=37.7
Q ss_pred EEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCC-CC----CHHHHHHHHHHHHHHCCCHHHEEEEEC
Q ss_conf 9999941866530231014566677767999996387-67----978899999999982998444799835
Q gi|254780231|r 4 VIVRLIPNAKKSGIASLEIPKDTSDTIHMKIKVTATP-QK----GKANKAMLAMLAKKLALSKSSLRMLSK 69 (98)
Q Consensus 4 i~v~V~P~a~~~~I~g~~~~~d~~~~~~lkv~v~ApP-v~----GkAN~ali~~Lak~l~v~ks~I~I~~G 69 (98)
|.|.+.|+..-. ..| ..+....+.|++-. .+ .+..+++++||.+.|+||..+|-|..-
T Consensus 38 vmV~v~~~~~m~-fgg-------s~~P~a~~~v~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~Riyi~f~ 100 (115)
T 1uiz_A 38 IAIHIVPDQIMS-FGD-------STDPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYINYY 100 (115)
T ss_dssp CEEEEECSCEEE-ETT-------BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEE
T ss_pred EEEEECCCCEEE-ECC-------CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf 899973894289-658-------899679999999768896777999999999999970989364999999
No 9
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=54.92 E-value=12 Score=17.79 Aligned_cols=48 Identities=13% Similarity=0.046 Sum_probs=41.1
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEEE
Q ss_conf 767999996387679788999999999829984447998355778069
Q gi|254780231|r 29 TIHMKIKVTATPQKGKANKAMLAMLAKKLALSKSSLRMLSKQSSPLKI 76 (98)
Q Consensus 29 ~~~lkv~v~ApPv~GkAN~ali~~Lak~l~v~ks~I~I~~G~~sr~K~ 76 (98)
++.+.|.+......-=.+..+....|+.|++|-.+|++..|-|++.-.
T Consensus 33 dG~v~v~~g~~e~GQG~~T~~~qi~Ae~Lgi~~~~V~v~~~DT~~~p~ 80 (330)
T 3hrd_B 33 DGSANVMFGAADIGQGSGTAMAQIAAEELGLDYEKIHVTWGDTMVTPD 80 (330)
T ss_dssp TSCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCC
T ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCC
T ss_conf 980999989937886788999999999978998990886246676889
No 10
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=54.29 E-value=12 Score=17.72 Aligned_cols=46 Identities=13% Similarity=0.163 Sum_probs=40.9
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCE
Q ss_conf 7679999963876797889999999998299844479983557780
Q gi|254780231|r 29 TIHMKIKVTATPQKGKANKAMLAMLAKKLALSKSSLRMLSKQSSPL 74 (98)
Q Consensus 29 ~~~lkv~v~ApPv~GkAN~ali~~Lak~l~v~ks~I~I~~G~~sr~ 74 (98)
++.+.|.+...+...=.+..+....|+.||+|..+|++..|-|++.
T Consensus 476 dG~v~V~~g~~d~GqG~~T~~aQiaAe~LGi~~~~V~v~~~DT~~~ 521 (777)
T 2w3s_B 476 DGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKV 521 (777)
T ss_dssp TSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTS
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
T ss_conf 9987998477468887788899999999689840799971898778
No 11
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=54.14 E-value=12 Score=17.71 Aligned_cols=57 Identities=14% Similarity=0.118 Sum_probs=35.4
Q ss_pred EEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCC-C----CCHHHHHHHHHHHHHHCCCHHHEEEEE
Q ss_conf 9999941866530231014566677767999996387-6----797889999999998299844479983
Q gi|254780231|r 4 VIVRLIPNAKKSGIASLEIPKDTSDTIHMKIKVTATP-Q----KGKANKAMLAMLAKKLALSKSSLRMLS 68 (98)
Q Consensus 4 i~v~V~P~a~~~~I~g~~~~~d~~~~~~lkv~v~ApP-v----~GkAN~ali~~Lak~l~v~ks~I~I~~ 68 (98)
|.|.+.|+..-. .. |..+.+..+.|++-. . ..+-.++++++|.+.|+||..+|-|..
T Consensus 59 vmV~v~~~~~m~-fg-------Gs~~P~a~vev~siG~~~~~~n~~~s~~i~~~l~~~LgIp~~RiyI~f 120 (133)
T 3fwu_A 59 VMMTFHDSTPMH-FF-------GSTDPVACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVLY 120 (133)
T ss_dssp CEEEEECSCCCC-BT-------TBCSSCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred EEEEEECCCCEE-EC-------CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 899971794179-67-------889961899999966889789999999999999997398967399999
No 12
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode, hookworm; 1.60A {Ancylostoma ceylanicum}
Probab=48.15 E-value=15 Score=17.21 Aligned_cols=60 Identities=12% Similarity=0.111 Sum_probs=37.2
Q ss_pred EEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCC-CC----CHHHHHHHHHHHHHHCCCHHHEEEEECCC
Q ss_conf 9999941866530231014566677767999996387-67----97889999999998299844479983557
Q gi|254780231|r 4 VIVRLIPNAKKSGIASLEIPKDTSDTIHMKIKVTATP-QK----GKANKAMLAMLAKKLALSKSSLRMLSKQS 71 (98)
Q Consensus 4 i~v~V~P~a~~~~I~g~~~~~d~~~~~~lkv~v~ApP-v~----GkAN~ali~~Lak~l~v~ks~I~I~~G~~ 71 (98)
+.|.+.|+..- ...| ..+....+.|++-. .+ .+--++++++|.+.|+||..++-|..-..
T Consensus 38 v~V~i~~~~~m-~fgg-------s~~p~a~~~i~sig~~~~~~n~~~s~~i~~~l~~~Lgi~~~riyI~f~~~ 102 (119)
T 2os5_A 38 IAIEVLAGQRI-THGA-------SRNPVAVIKVESIGALSADDNIRHTQKITQFCQDTLKLPKDKVIITYFDL 102 (119)
T ss_dssp CEEEEECSCCC-CBTT-------BCSSCEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEC
T ss_pred EEEEEECCCCE-EECC-------CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf 79998489517-9448-------99987999999953899789899999999999997397957599999978
No 13
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=45.12 E-value=17 Score=16.86 Aligned_cols=57 Identities=7% Similarity=0.086 Sum_probs=32.8
Q ss_pred EEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCC-CC----CHHHHHHHHHHHHHHCCCHHHEEEEE
Q ss_conf 9999941866530231014566677767999996387-67----97889999999998299844479983
Q gi|254780231|r 4 VIVRLIPNAKKSGIASLEIPKDTSDTIHMKIKVTATP-QK----GKANKAMLAMLAKKLALSKSSLRMLS 68 (98)
Q Consensus 4 i~v~V~P~a~~~~I~g~~~~~d~~~~~~lkv~v~ApP-v~----GkAN~ali~~Lak~l~v~ks~I~I~~ 68 (98)
|.|.+.|+..- -..| . .+...-+.|.+-. .+ .+-.++++++|.+.|+||..+|-|..
T Consensus 59 imV~i~~~~~m-~fgG---s----~eP~a~v~v~siG~~~~e~n~~~s~~i~~~l~~~LgIp~~RiYI~f 120 (133)
T 3fwt_A 59 VMTAFSDKTPI-SFQG---S----TAPAAYVRVESWGEYAPSKPKMMTPRIAAAITKECGIPAERIYVFY 120 (133)
T ss_dssp CEEEEECSCCC-CBTT---B----CSSCEEEEEEEEECCCTHHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred EEEEEECCCEE-EECC---C----CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 99998379507-9658---8----9975999999965899788999999999999997398968499999
No 14
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=40.44 E-value=20 Score=16.42 Aligned_cols=60 Identities=7% Similarity=0.069 Sum_probs=34.9
Q ss_pred EEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCC-CC----CHHHHHHHHHHHHHHCCCHHHEEEEECCC
Q ss_conf 9999941866530231014566677767999996387-67----97889999999998299844479983557
Q gi|254780231|r 4 VIVRLIPNAKKSGIASLEIPKDTSDTIHMKIKVTATP-QK----GKANKAMLAMLAKKLALSKSSLRMLSKQS 71 (98)
Q Consensus 4 i~v~V~P~a~~~~I~g~~~~~d~~~~~~lkv~v~ApP-v~----GkAN~ali~~Lak~l~v~ks~I~I~~G~~ 71 (98)
+.|.+.++..-.- .| .......+.+++-- .+ -+-.++++++|.+.|++|+.++-|..-..
T Consensus 38 i~V~v~~~~~m~~-gg-------s~~p~a~~~v~sig~~~~e~n~~~~~~i~~~l~~~Lgi~~~riyi~f~~~ 102 (115)
T 2xcz_A 38 VMTSLQCGVPMTF-SG-------NTEPTCYVEVKSIGALDGSRTQEVSELVCGHIEQNLGIPADRIYIGFEDV 102 (115)
T ss_dssp CEEEEECSCCCCB-TT-------BCSSCEEEEEEESSCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEC
T ss_pred EEEEEECCCCEEE-EC-------CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf 9999845984587-17-------89936999999974889056899999999999998495957699999988
No 15
>3nrz_C Xanthine dehydrogenase/oxidase; xanthine oxidase, hypoxanthine, substrate orientation, hydro oxidoreductase; HET: FAD MTE HPA; 1.80A {Bos taurus} PDB: 3eub_C* 3b9j_C* 1fiq_C* 3etr_C* 3ns1_C*
Probab=39.97 E-value=21 Score=16.37 Aligned_cols=45 Identities=11% Similarity=0.110 Sum_probs=39.6
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCC
Q ss_conf 767999996387679788999999999829984447998355778
Q gi|254780231|r 29 TIHMKIKVTATPQKGKANKAMLAMLAKKLALSKSSLRMLSKQSSP 73 (98)
Q Consensus 29 ~~~lkv~v~ApPv~GkAN~ali~~Lak~l~v~ks~I~I~~G~~sr 73 (98)
++.+.|++......--.+..+....|+.|++|..+|++..|-|++
T Consensus 456 dG~v~v~~g~~~~GqG~~T~~~qi~Ae~Lgi~~~~v~v~~~DT~~ 500 (756)
T 3nrz_C 456 DGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNT 500 (756)
T ss_dssp TSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTT
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf 997799826745678712579999999849984499998489988
No 16
>1dpt_A D-dopachrome tautomerase; cytokine, growth factor; 1.54A {Homo sapiens} SCOP: d.80.1.3
Probab=39.90 E-value=21 Score=16.37 Aligned_cols=57 Identities=16% Similarity=0.236 Sum_probs=37.0
Q ss_pred EEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCC-----C-HHHHHHHHHHHHHHCCCHHHEEEEE
Q ss_conf 999994186653023101456667776799999638767-----9-7889999999998299844479983
Q gi|254780231|r 4 VIVRLIPNAKKSGIASLEIPKDTSDTIHMKIKVTATPQK-----G-KANKAMLAMLAKKLALSKSSLRMLS 68 (98)
Q Consensus 4 i~v~V~P~a~~~~I~g~~~~~d~~~~~~lkv~v~ApPv~-----G-kAN~ali~~Lak~l~v~ks~I~I~~ 68 (98)
+.|.+.|+..-. ..| ....+.-+.+++...- . +..++++++|.+.|+||+.++-|..
T Consensus 37 vmV~v~~~~~m~-fgG-------s~eP~a~~~l~sig~~~~~e~n~~~s~~i~~~l~~~LgI~~~RiyI~f 99 (117)
T 1dpt_A 37 VNVTVRPGLAMA-LSG-------STEPCAQLSISSIGVVGTAEDNRSHSAHFFEFLTKELALGQDRILIRF 99 (117)
T ss_dssp CEEEEECSCCCC-BTT-------BCSSCEEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred EEEEEECCEEEE-ECC-------CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 899984214799-759-------999789999999558686667799999999999987097967599999
No 17
>1szw_A TRNA pseudouridine synthase D; novel fold, RNA modification, TRUD, structural proteomics in europe, spine, structural genomics lyase; 2.00A {Escherichia coli} SCOP: d.265.1.4 PDB: 1si7_A 1sb7_A
Probab=35.78 E-value=24 Score=15.98 Aligned_cols=52 Identities=15% Similarity=0.188 Sum_probs=37.5
Q ss_pred EEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCE
Q ss_conf 02310145666777679999963876797889999999998299844479983557780
Q gi|254780231|r 16 GIASLEIPKDTSDTIHMKIKVTATPQKGKANKAMLAMLAKKLALSKSSLRMLSKQSSPL 74 (98)
Q Consensus 16 ~I~g~~~~~d~~~~~~lkv~v~ApPv~GkAN~ali~~Lak~l~v~ks~I~I~~G~~sr~ 74 (98)
+|.++++.. .|+.+.+.|.= .|.-+..++..||+.++++.++|.. .|.+.|.
T Consensus 53 Ei~~~~~~g---~G~y~~~~l~K---~n~dT~~ai~~LAr~lgi~~~~igy-AGlKDKr 104 (379)
T 1szw_A 53 EDLGFEPDG---EGEHILVRILK---NGCNTRFVADALAKFLKIHAREVSF-AGQKDKH 104 (379)
T ss_dssp EECSSCCCS---CSSEEEEEEEE---SSSCHHHHHHHHHHHTTCCGGGEEE-SCCCCTT
T ss_pred EECCCCCCC---CCCEEEEEEEE---CCCCHHHHHHHHHHHHCCCHHHEEE-CCCCCCC
T ss_conf 604889789---85789999998---8999899999999984988766235-5156587
No 18
>1mww_A Hypothetical protein HI1388.1; structural genomics, structure 2 function project, S2F, unknown function; HET: GLU; 2.08A {Haemophilus influenzae} SCOP: d.80.1.4
Probab=33.31 E-value=26 Score=15.73 Aligned_cols=48 Identities=13% Similarity=0.174 Sum_probs=31.5
Q ss_pred CCCCCEEEEEEECCC-CCCHHH----HHHHHHHHHHHCCCHHHEEEEECCCCC
Q ss_conf 677767999996387-679788----999999999829984447998355778
Q gi|254780231|r 26 TSDTIHMKIKVTATP-QKGKAN----KAMLAMLAKKLALSKSSLRMLSKQSSP 73 (98)
Q Consensus 26 ~~~~~~lkv~v~ApP-v~GkAN----~ali~~Lak~l~v~ks~I~I~~G~~sr 73 (98)
++....+-|.|+.-+ ..-..+ +++++.|++.|++|+.+|.|.--+..+
T Consensus 54 ~r~~~~~~I~I~~~~Grs~eqK~~L~~~it~~l~~~lgi~~~~v~I~i~e~~~ 106 (128)
T 1mww_A 54 DRSDDYTVIEINLMAGRMEGTKKRLIKMLFSELEYKLGIRAHDVEITIKEQPA 106 (128)
T ss_dssp TSCTTCEEEEEEEETTCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEECG
T ss_pred CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCH
T ss_conf 77797799999976899999999999999999999859494829999998688
No 19
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=29.07 E-value=31 Score=15.30 Aligned_cols=46 Identities=17% Similarity=0.128 Sum_probs=39.7
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCE
Q ss_conf 7679999963876797889999999998299844479983557780
Q gi|254780231|r 29 TIHMKIKVTATPQKGKANKAMLAMLAKKLALSKSSLRMLSKQSSPL 74 (98)
Q Consensus 29 ~~~lkv~v~ApPv~GkAN~ali~~Lak~l~v~ks~I~I~~G~~sr~ 74 (98)
++.+.|+........-.+..+....|+.||+|-.+|.+..|-|+..
T Consensus 469 dG~v~v~~g~~e~GqG~~T~~~qiaAe~LGi~~~~V~v~~~DT~~~ 514 (769)
T 1rm6_A 469 DGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALT 514 (769)
T ss_dssp TCCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTS
T ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCC
T ss_conf 9749998577456788530289999998589632363124898878
No 20
>2kvr_A Ubiquitin carboxyl-terminal hydrolase 7; USP7, ubiquitin-like domain, UBL, ubiquitin specific protease, HOST-virus interaction, nucleus, protease; NMR {Homo sapiens}
Probab=27.94 E-value=28 Score=15.54 Aligned_cols=40 Identities=10% Similarity=0.148 Sum_probs=32.7
Q ss_pred CCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEEEEEECC
Q ss_conf 7978899999999982998444799835577806999829
Q gi|254780231|r 42 KGKANKAMLAMLAKKLALSKSSLRMLSKQSSPLKIIYIDK 81 (98)
Q Consensus 42 ~GkAN~ali~~Lak~l~v~ks~I~I~~G~~sr~K~i~I~~ 81 (98)
+...=.++...+|+.||+|..++.+-.=..-.+++++.+.
T Consensus 64 k~~t~~el~~~va~~~g~~~~~~RlW~~~~RqN~T~Rpd~ 103 (130)
T 2kvr_A 64 KNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRPAM 103 (130)
T ss_dssp TTSBHHHHHHHHHHHHCCCGGGCEEEECCCCBTTBCCCCC
T ss_pred CCCCHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCC
T ss_conf 7595999999999995979788988675545688828886
No 21
>2ogh_A Eukaryotic translation initiation factor EIF-1; alpha-beta protein; NMR {Saccharomyces cerevisiae}
Probab=25.05 E-value=37 Score=14.87 Aligned_cols=70 Identities=16% Similarity=0.276 Sum_probs=43.5
Q ss_pred EEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEEEEEECCC
Q ss_conf 59999941866530231014566677767999996387679788999999999829984447998355778069998299
Q gi|254780231|r 3 NVIVRLIPNAKKSGIASLEIPKDTSDTIHMKIKVTATPQKGKANKAMLAMLAKKLALSKSSLRMLSKQSSPLKIIYIDKD 82 (98)
Q Consensus 3 ~i~v~V~P~a~~~~I~g~~~~~d~~~~~~lkv~v~ApPv~GkAN~ali~~Lak~l~v~ks~I~I~~G~~sr~K~i~I~~~ 82 (98)
.|.|++.-+.++-.++-+.. -+ .+-.=+++.+.|.+.|++.- ++..+.. ..+.|.|-|+
T Consensus 25 ~I~I~~~kR~g~K~vT~I~G----------------l~-~~~dlk~l~k~lkk~~~cgg---sV~~~~~-~~~~I~iQGd 83 (108)
T 2ogh_A 25 YIHIRIQQRNGRKTLTTVQG----------------VP-EEYDLKRILKVLKKDFACNG---NIVKDPE-MGEIIQLQGD 83 (108)
T ss_dssp SEEEEEECCSSSCCEEEEEC----------------CC-TTSCHHHHHHHHHHHHCCCE---EEECCTT-SSCEEEEESS
T ss_pred EEEEEEEECCCCCCEEEECC----------------CC-CCCCHHHHHHHHHHHCCCCE---EEEECCC-CCCEEEECCC
T ss_conf 28999985679942899718----------------87-86469999999988626860---8955888-9988997391
Q ss_pred H-HHHHHHHHHH
Q ss_conf 8-9999999752
Q gi|254780231|r 83 C-KEITELLQNN 93 (98)
Q Consensus 83 ~-~~i~~~L~~~ 93 (98)
. .++.+.|...
T Consensus 84 ~~~~v~~~L~~~ 95 (108)
T 2ogh_A 84 QRAKVCEFMISQ 95 (108)
T ss_dssp CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC
T ss_conf 899999999983
No 22
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis V583} SCOP: d.58.18.13
Probab=24.84 E-value=37 Score=14.84 Aligned_cols=58 Identities=5% Similarity=0.134 Sum_probs=41.3
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCC-------EEEEEECCCHHHHHHHHHHHHH
Q ss_conf 7999996387679788999999999829984447998355778-------0699982998999999975230
Q gi|254780231|r 31 HMKIKVTATPQKGKANKAMLAMLAKKLALSKSSLRMLSKQSSP-------LKIIYIDKDCKEITELLQNNDS 95 (98)
Q Consensus 31 ~lkv~v~ApPv~GkAN~ali~~Lak~l~v~ks~I~I~~G~~sr-------~K~i~I~~~~~~i~~~L~~~~s 95 (98)
.+++.. ....|.+.++.-|++.|++ ++.|+.|.-.. .=++.+.|+.+++.+.+.....
T Consensus 25 lvrl~f----~g~~a~~pvis~l~~~~~v---~vnIL~g~i~~i~~~~~G~l~v~l~G~~~~~~~ai~~L~~ 89 (100)
T 2qsw_A 25 IVRLLF----HGEQAKLPIISHIVQEYQV---EVSIIQGNIQQTKQGAVGSLYIQLLGEEQNILAAIEGLRK 89 (100)
T ss_dssp EEEEEE----ESCSCSSCHHHHHHHHHTC---EEEEEEEEEEEETTEEEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred EEEEEE----CCCCCCCCHHHHHHHHHCC---CEEEEEEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHH
T ss_conf 999998----4987686599999998598---3899988638807821799999995899999999999998
No 23
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=21.80 E-value=43 Score=14.48 Aligned_cols=44 Identities=9% Similarity=0.126 Sum_probs=38.0
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCC
Q ss_conf 67999996387679788999999999829984447998355778
Q gi|254780231|r 30 IHMKIKVTATPQKGKANKAMLAMLAKKLALSKSSLRMLSKQSSP 73 (98)
Q Consensus 30 ~~lkv~v~ApPv~GkAN~ali~~Lak~l~v~ks~I~I~~G~~sr 73 (98)
+.+.|........-=.+..+....|+.|++|..+|.+..|-|+.
T Consensus 511 G~v~v~~g~~e~GqG~~T~~aqiaAe~LGip~~~V~v~~~DT~~ 554 (803)
T 1ffv_B 511 GSAIARMGTITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTST 554 (803)
T ss_dssp SCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTT
T ss_pred CCEEEEECCCCCCCCCCEEHHHHHHHHHCCCCCCCEEECCCCCC
T ss_conf 83777732432478744006767899859960246364488998
No 24
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=21.44 E-value=44 Score=14.44 Aligned_cols=25 Identities=4% Similarity=0.177 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHCCCHHHEEEEECC
Q ss_conf 8999999999829984447998355
Q gi|254780231|r 46 NKAMLAMLAKKLALSKSSLRMLSKQ 70 (98)
Q Consensus 46 N~ali~~Lak~l~v~ks~I~I~~G~ 70 (98)
=+++.+.+++.+++|+.+|.++--+
T Consensus 23 ~~~it~~~~~~lg~p~e~v~V~i~E 47 (63)
T 2x4k_A 23 VSEVTDAVEKTTGANRQAIHVVIEE 47 (63)
T ss_dssp HHHHHHHHHHHHCCCGGGCEEEEEE
T ss_pred HHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf 9999999999849490529999998
No 25
>1v97_A XD, xanthine dehydrogenase; molybdopterin, FYX-051, reaction intermediate, oxidoreductase; HET: MTE FAD FYX; 1.94A {Bos taurus} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.87.2.1 d.133.1.1 d.145.1.3 PDB: 1fo4_A* 1vdv_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 2e3t_A* 1wyg_A* 3b9j_C* 1fiq_C* 3eub_C* 3etr_C* 1fiq_B* 3b9j_B* 3etr_B* 3eub_B* 3b9j_A* 1fiq_A* 3eub_A* 3etr_A*
Probab=21.22 E-value=44 Score=14.41 Aligned_cols=45 Identities=11% Similarity=0.110 Sum_probs=37.9
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCC
Q ss_conf 767999996387679788999999999829984447998355778
Q gi|254780231|r 29 TIHMKIKVTATPQKGKANKAMLAMLAKKLALSKSSLRMLSKQSSP 73 (98)
Q Consensus 29 ~~~lkv~v~ApPv~GkAN~ali~~Lak~l~v~ks~I~I~~G~~sr 73 (98)
++.+.|........-=.+..+....|+.|++|..+|.+..|-|++
T Consensus 1026 DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~dT~~ 1070 (1332)
T 1v97_A 1026 DGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNT 1070 (1332)
T ss_dssp TSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTT
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHEEEECCCCCC
T ss_conf 998899978836787788999999999969987878996168777
Done!