Query gi|254780232|ref|YP_003064645.1| inorganic pyrophosphatase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 177
No_of_seqs 137 out of 981
Neff 5.9
Searched_HMMs 23785
Date Tue May 24 01:59:37 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780232.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fq3_A Inorganic pyrophosphata 100.0 0 0 473.8 21.5 177 1-177 21-197 (197)
2 3gvf_A Inorganic pyrophosphata 100.0 0 0 470.9 21.7 176 1-176 21-196 (196)
3 3ld3_A Inorganic pyrophosphata 100.0 0 0 467.7 20.8 176 1-176 21-196 (199)
4 2au7_A Inorganic pyrophosphata 100.0 0 0 452.8 21.5 175 3-177 1-175 (175)
5 1qez_A Ppase, S-ppase, protein 100.0 0 0 441.3 21.0 170 6-176 2-171 (173)
6 3d53_A Inorganic pyrophosphata 100.0 0 0 439.5 20.8 173 1-174 1-173 (173)
7 3i98_A TH-IPP; pyrophosphatase 100.0 0 0 438.6 20.6 172 2-177 1-173 (178)
8 2prd_A Pyrophosphate phosphohy 100.0 0 0 436.3 21.6 171 2-175 1-173 (174)
9 2bqx_A Inorganic pyrophosphata 100.0 0 0 438.1 19.5 172 2-175 1-172 (173)
10 1sxv_A Inorganic pyrophosphata 100.0 0 0 421.7 16.9 160 14-176 10-169 (172)
11 1e9g_A Ppase, inorganic pyroph 100.0 0 0 393.9 15.1 170 4-176 29-228 (286)
12 3d06_A Cellular tumor antigen 28.6 29 0.0012 14.9 3.7 39 6-44 3-43 (200)
13 1q1o_A Cell division control p 26.8 14 0.0006 16.8 0.6 42 131-173 37-91 (98)
14 2dhx_A Poly (ADP-ribose) polym 23.3 36 0.0015 14.2 3.6 37 133-169 22-66 (104)
15 2xip_A Tumour protein P73; pho 22.2 38 0.0016 14.1 4.0 38 7-44 5-44 (208)
16 1h6w_A Bacteriophage T4 short 21.1 17 0.00071 16.4 0.0 18 52-69 287-304 (312)
17 2o0q_A Hypothetical protein CC 20.8 41 0.0017 13.9 3.4 38 14-63 54-91 (115)
No 1
>3fq3_A Inorganic pyrophosphatase:bacterial/archaeal inorganic pyrophosphatase; ssgcid, inorganic phosphatase, hydrolase; 1.90A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=0 Score=473.79 Aligned_cols=177 Identities=55% Similarity=1.055 Sum_probs=173.8
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCC
Q ss_conf 96500188665799858999985686873026880665709994214776567778121105535899840289922777
Q gi|254780232|r 1 MVQLNEISLGSNSPIDVNVFIEISLGGYPIKYEMDKKSGVLVVDRFISTPMLYPGNYGFIPNTLSDDGDPVDVIMYSSEP 80 (177)
Q Consensus 1 ~m~~~~i~~~~~~p~~vn~vIEIP~gs~~~KyE~d~~~g~~~~dR~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~ 80 (177)
+||+++||+|+++|++||||||||+||+|+||||||++|.|++||+|++++.||+|||||||||++||||||||||+++|
T Consensus 21 ~m~~~~i~~g~~~P~~vnvvIEIP~gs~~~KyE~dk~~g~~~~dR~l~~~~~YP~nYGfIP~T~~~DgDPLDvlvl~~~~ 100 (197)
T 3fq3_A 21 SMNIDAISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSEDGDPIDVLVCNTRP 100 (197)
T ss_dssp -CCGGGSCSCSSTTSCEEEEEEECTTCCSEEEEEETTTTEEEEEEECCSSBCCSSEEEECTTCCCTTSSCCEEEECCSSC
T ss_pred CCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
T ss_conf 66445488899998878999995899986208996689969999875767738765665567535799986799974777
Q ss_pred CCCCCEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH
Q ss_conf 67742899869899996047877527999963788822256587789898999999999999642888971898031499
Q gi|254780232|r 81 ILPGSVISTRPIGVMKMEDDGGIDEKILAVPSKNITSLYDSIQSYEDVPNAYLQKVEHFFKHYKDLEDGKWAKLDGWEGV 160 (177)
Q Consensus 81 ~~~G~vv~~r~iG~l~m~D~ge~D~KiiaVp~~d~~~~~~~i~di~Dl~~~~l~~I~~fF~~YK~le~~K~v~v~g~~~~ 160 (177)
+++|++++||+||+|+|+|+||.||||||||+++.+|+|++++|++|++++++++|++||++||+||++|++++.||.|+
T Consensus 101 ~~~G~vv~~r~IG~L~m~D~ge~D~KIIaVp~~~~dp~~~~i~dl~Dl~~~~l~~I~~fF~~YK~le~~K~v~v~g~~d~ 180 (197)
T 3fq3_A 101 LIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPEITLKQIAHFFEHYKDLEPGKWVKIGDWGDE 180 (197)
T ss_dssp CCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCSTTTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEECCCBCH
T ss_pred CCCCCEEEEEEEEEEEECCCCCCCCEEEEEECCCCCCHHCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCH
T ss_conf 89833899999899972359997563999766678802134388478999999999999999758789987987774599
Q ss_pred HHHHHHHHHHHHHHHCC
Q ss_conf 99999999999988509
Q gi|254780232|r 161 NSAHKIILEAVKRGIKE 177 (177)
Q Consensus 161 ~~A~~iI~~~~~ry~k~ 177 (177)
++|+++|++||+||+.|
T Consensus 181 ~~A~~iI~e~~~~yk~k 197 (197)
T 3fq3_A 181 DYARKFIVEAIERAKGK 197 (197)
T ss_dssp HHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHCC
T ss_conf 99999999999998559
No 2
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, seattle structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A*
Probab=100.00 E-value=0 Score=470.94 Aligned_cols=176 Identities=47% Similarity=0.877 Sum_probs=172.8
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCC
Q ss_conf 96500188665799858999985686873026880665709994214776567778121105535899840289922777
Q gi|254780232|r 1 MVQLNEISLGSNSPIDVNVFIEISLGGYPIKYEMDKKSGVLVVDRFISTPMLYPGNYGFIPNTLSDDGDPVDVIMYSSEP 80 (177)
Q Consensus 1 ~m~~~~i~~~~~~p~~vn~vIEIP~gs~~~KyE~d~~~g~~~~dR~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~ 80 (177)
.||+|+||+|+++|++||||||||+||+++||||||++|.|++||+++++++||+|||||||||++||||||||||++.|
T Consensus 21 ~m~~~~ip~g~~~p~~vnvvIEIP~gs~~~KyE~dk~~g~~~ldr~l~~~~~YP~nYGfIPqT~~~DgDPLDvlvl~~~~ 100 (196)
T 3gvf_A 21 SMSFSNVPAGKDLPQDFNVIIEIPAQSEPVKYEADKALGLLVVDRFIGTGMRYPVNYGFIPQTLSGDGDPVDVLVITPFP 100 (196)
T ss_dssp --CGGGSCSCSBTTTBEEEEEEECTTCCSEEEEEETTTTEEEEEEECTTCCCCSSEEEECTTCCCTTSSCCEEEECCSSC
T ss_pred CCCHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
T ss_conf 55487887998999879999993899986669997799968998746877769855424666306899954899971532
Q ss_pred CCCCCEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH
Q ss_conf 67742899869899996047877527999963788822256587789898999999999999642888971898031499
Q gi|254780232|r 81 ILPGSVISTRPIGVMKMEDDGGIDEKILAVPSKNITSLYDSIQSYEDVPNAYLQKVEHFFKHYKDLEDGKWAKLDGWEGV 160 (177)
Q Consensus 81 ~~~G~vv~~r~iG~l~m~D~ge~D~KiiaVp~~d~~~~~~~i~di~Dl~~~~l~~I~~fF~~YK~le~~K~v~v~g~~~~ 160 (177)
+++|++++||+||+|+|+|+||.||||||||+++.+|+|++|+|++||+++++++|++||++||+||++|++++.||.|+
T Consensus 101 ~~~G~vv~~r~IG~L~m~D~ge~D~KIIaV~~~~~dp~~~~i~dl~dl~~~~l~~I~~fF~~YK~le~gK~v~v~g~~d~ 180 (196)
T 3gvf_A 101 LLAGSVVRARALGMLKMTDESGVDAKLVAVPHDKVCPMTANLKSIDDVPAYLKDQIKHFFEQYKALEKGKWVKVEGWDGI 180 (196)
T ss_dssp CCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEEEEECH
T ss_pred CCCCEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCH
T ss_conf 37840899988899996459997674899877765434405587588998899999999999757777998688966699
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999999999998850
Q gi|254780232|r 161 NSAHKIILEAVKRGIK 176 (177)
Q Consensus 161 ~~A~~iI~~~~~ry~k 176 (177)
++|.++|++||+||+|
T Consensus 181 ~~A~~iI~e~~~~ykk 196 (196)
T 3gvf_A 181 DAAHKEITDGVANFKK 196 (196)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 9999999999999609
No 3
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A
Probab=100.00 E-value=0 Score=467.68 Aligned_cols=176 Identities=46% Similarity=0.882 Sum_probs=172.8
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCC
Q ss_conf 96500188665799858999985686873026880665709994214776567778121105535899840289922777
Q gi|254780232|r 1 MVQLNEISLGSNSPIDVNVFIEISLGGYPIKYEMDKKSGVLVVDRFISTPMLYPGNYGFIPNTLSDDGDPVDVIMYSSEP 80 (177)
Q Consensus 1 ~m~~~~i~~~~~~p~~vn~vIEIP~gs~~~KyE~d~~~g~~~~dR~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~ 80 (177)
.||+++||+|++.|++||||||||+||+|+||||||++|.|++||+|+++++||+|||||||||++||||||||||++.|
T Consensus 21 ~m~~~~i~~g~~~P~~vnvvIEIP~gs~~~KyE~dk~~g~l~ldR~l~~~~~YP~nYGfIP~T~~~DGDPLDvlvl~~~~ 100 (199)
T 3ld3_A 21 SMNLDDIGSGSNAPEEVNVVIEVSQDSHPVKYEFDEKNGALWVDRFLPTAMYYPCNYGFIPNTIAGDGDPVDVLVLARFP 100 (199)
T ss_dssp -----CCCSCTTTTTSEEEEEEECTTCCSEEEEECTTTCCEEEEEECSSSBCCSSEEEECTTCCCTTSSCCEEEECCSSC
T ss_pred CCCHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
T ss_conf 76587888999999889999995899986528993478978999652667748856553676536799970899962765
Q ss_pred CCCCCEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH
Q ss_conf 67742899869899996047877527999963788822256587789898999999999999642888971898031499
Q gi|254780232|r 81 ILPGSVISTRPIGVMKMEDDGGIDEKILAVPSKNITSLYDSIQSYEDVPNAYLQKVEHFFKHYKDLEDGKWAKLDGWEGV 160 (177)
Q Consensus 81 ~~~G~vv~~r~iG~l~m~D~ge~D~KiiaVp~~d~~~~~~~i~di~Dl~~~~l~~I~~fF~~YK~le~~K~v~v~g~~~~ 160 (177)
+++|++++||+||+|+|+|+||.||||||||+++.+|+|++|+|++||+++++++|++||++||++|++|++++.||.|+
T Consensus 101 ~~~G~vv~~R~IGvL~m~D~ge~D~KIIaVp~~~~dp~~~~i~dl~Dl~~~~l~~I~~fF~~YK~le~~k~v~v~g~~d~ 180 (199)
T 3ld3_A 101 VMPGAVICVRPVGVLMMNDEKGEDAKVLAVPATKVDQYYGNIVNYSDLPSSFLDSISHFFSFYKKLEKDKFVSVGCWQDA 180 (199)
T ss_dssp CCTTCEEEEEEEEEEEEEETTEECCEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEEEEEEH
T ss_pred CCCCEEEEEEEEEEEEECCCCCCCCCEEEEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCH
T ss_conf 89933999999899997007997576698536889800134688488999899999999999647688976997876499
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999999999998850
Q gi|254780232|r 161 NSAHKIILEAVKRGIK 176 (177)
Q Consensus 161 ~~A~~iI~~~~~ry~k 176 (177)
++|.++|++|++||+|
T Consensus 181 ~~A~~iI~~~~~~ykk 196 (199)
T 3ld3_A 181 ASAKELIRSAIIAAKK 196 (199)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999985
No 4
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A*
Probab=100.00 E-value=0 Score=452.78 Aligned_cols=175 Identities=47% Similarity=0.871 Sum_probs=171.8
Q ss_pred CCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCC
Q ss_conf 50018866579985899998568687302688066570999421477656777812110553589984028992277767
Q gi|254780232|r 3 QLNEISLGSNSPIDVNVFIEISLGGYPIKYEMDKKSGVLVVDRFISTPMLYPGNYGFIPNTLSDDGDPVDVIMYSSEPIL 82 (177)
Q Consensus 3 ~~~~i~~~~~~p~~vn~vIEIP~gs~~~KyE~d~~~g~~~~dR~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~~~ 82 (177)
||+|||+|++.|++||||||||+||+|+|||||+++|.|++||++++++.||+|||||||||++||||||||||++.+++
T Consensus 1 ~~~dip~~~~~p~~v~~viEIP~gs~~~K~E~dk~~g~~~~dr~~~~~~~yP~nYGfIP~T~~~DgDPLDvivl~~~~~~ 80 (175)
T 2au7_A 1 SLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDQFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQ 80 (175)
T ss_dssp CGGGCCSCSBTTTBEEEEEEECTTCCSEEEEECTTTCCEEEEEECSSSCCCSSEEEECTTCCCTTSSCCEEEECCSSCCC
T ss_pred CCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
T ss_conf 94227899999988999999359998535999657897899866587775987666444753789998179997077788
Q ss_pred CCCEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH
Q ss_conf 74289986989999604787752799996378882225658778989899999999999964288897189803149999
Q gi|254780232|r 83 PGSVISTRPIGVMKMEDDGGIDEKILAVPSKNITSLYDSIQSYEDVPNAYLQKVEHFFKHYKDLEDGKWAKLDGWEGVNS 162 (177)
Q Consensus 83 ~G~vv~~r~iG~l~m~D~ge~D~KiiaVp~~d~~~~~~~i~di~Dl~~~~l~~I~~fF~~YK~le~~K~v~v~g~~~~~~ 162 (177)
+|++++||+||+|+|+|+||.||||||||+++.+|++++++|++|++++++++|++||++||+++++|++++.||.|+++
T Consensus 81 ~G~vv~~r~iG~l~m~D~ge~D~KiiaVp~~~~dp~~~~i~di~dl~~~~l~~I~~fF~~YK~le~~k~v~i~g~~~~~~ 160 (175)
T 2au7_A 81 PGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEA 160 (175)
T ss_dssp TTCEEEEEEEEEEEEEETTEECCEEEEEECTTTCSTTTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEEEEECHHH
T ss_pred CEEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHH
T ss_conf 81289999989999612999755589964456875424558737899999999999999876867898389886619999
Q ss_pred HHHHHHHHHHHHHCC
Q ss_conf 999999999988509
Q gi|254780232|r 163 AHKIILEAVKRGIKE 177 (177)
Q Consensus 163 A~~iI~~~~~ry~k~ 177 (177)
|.++|++||+||++|
T Consensus 161 A~~~I~~~~~~yk~k 175 (175)
T 2au7_A 161 AKAEIVASFERAKNK 175 (175)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 999999999999629
No 5
>1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1
Probab=100.00 E-value=0 Score=441.30 Aligned_cols=170 Identities=46% Similarity=0.816 Sum_probs=166.7
Q ss_pred CCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 18866579985899998568687302688066570999421477656777812110553589984028992277767742
Q gi|254780232|r 6 EISLGSNSPIDVNVFIEISLGGYPIKYEMDKKSGVLVVDRFISTPMLYPGNYGFIPNTLSDDGDPVDVIMYSSEPILPGS 85 (177)
Q Consensus 6 ~i~~~~~~p~~vn~vIEIP~gs~~~KyE~d~~~g~~~~dR~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~~~~G~ 85 (177)
+||||+++|++||||||||+||+ +|||||+++|.|++||++++++.||||||||||||++|||||||||+++.++++|+
T Consensus 2 ~i~p~~~~p~~vn~vIEIP~gs~-~KyE~d~~~g~~~~dr~l~~~~~yP~nYGfIP~T~~~DgDPLDvlvl~~~~~~~G~ 80 (173)
T 1qez_A 2 KLSPGKNAPDVVNVLVEIPQGSN-IKYEYDDEEGVIKVDRVLYTSMNYPFNYGFIPGTLEEDGDPLDVLVITNYQLYPGS 80 (173)
T ss_dssp CCCSCTTTTTSEEEEEEECTTCC-EEEEEETTTTEEEEEEECSSSBCCSSEEEECTTCCCTTSSCCEEEECCSSCCCTTC
T ss_pred CCCCCCCCCCEEEEEEEECCCCC-EEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCE
T ss_conf 55789999986899999689997-67998367897778851266776887643335742689996279998064379925
Q ss_pred EEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHH
Q ss_conf 89986989999604787752799996378882225658778989899999999999964288897189803149999999
Q gi|254780232|r 86 VISTRPIGVMKMEDDGGIDEKILAVPSKNITSLYDSIQSYEDVPNAYLQKVEHFFKHYKDLEDGKWAKLDGWEGVNSAHK 165 (177)
Q Consensus 86 vv~~r~iG~l~m~D~ge~D~KiiaVp~~d~~~~~~~i~di~Dl~~~~l~~I~~fF~~YK~le~~K~v~v~g~~~~~~A~~ 165 (177)
+++||+||+|.|+|+||.||||||||+++++|+|++++|++||+++++++|+|||++||+||++|++++.||.|+++|.+
T Consensus 81 vv~~r~iG~l~m~D~ge~D~KiiaV~~~~~d~~~~~i~di~dl~~~~l~~I~~fF~~YK~le~~k~v~v~g~~~~~~A~~ 160 (173)
T 1qez_A 81 VIEVRPIGILYMKDEEGEDAKIVAVPKDKTDPSFSNIKDINDLPQATKNKIVHFFEHYKELEPGKYVKISGWGSATEAKN 160 (173)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEEEEECHHHHHH
T ss_pred EEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH
T ss_conf 99999989998157989843199977776885113449847889879999999999970767898688886669999999
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999998850
Q gi|254780232|r 166 IILEAVKRGIK 176 (177)
Q Consensus 166 iI~~~~~ry~k 176 (177)
+|++||+||++
T Consensus 161 ~I~~a~~ry~~ 171 (173)
T 1qez_A 161 RIQLAIKRVSG 171 (173)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHHC
T ss_conf 99999999870
No 6
>3d53_A Inorganic pyrophosphatase; seattle structural genomics center for infectious disease, ssgcid, cytoplasm, hydrolase, magnesium; 2.20A {Rickettsia prowazekii str} PDB: 3emj_A*
Probab=100.00 E-value=0 Score=439.52 Aligned_cols=173 Identities=49% Similarity=0.901 Sum_probs=167.9
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCC
Q ss_conf 96500188665799858999985686873026880665709994214776567778121105535899840289922777
Q gi|254780232|r 1 MVQLNEISLGSNSPIDVNVFIEISLGGYPIKYEMDKKSGVLVVDRFISTPMLYPGNYGFIPNTLSDDGDPVDVIMYSSEP 80 (177)
Q Consensus 1 ~m~~~~i~~~~~~p~~vn~vIEIP~gs~~~KyE~d~~~g~~~~dR~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~ 80 (177)
-|++++||++.+ +++||||||||+||+++|||||+++|.|++||++++++.||||||||||||++||||||||||++.|
T Consensus 1 ~~~l~~i~~~~~-~~~vn~viEIP~gs~~iKyE~dk~~g~~~~dr~~~~~~~yP~nYGfiP~T~~~DgDPLDv~vl~~~~ 79 (173)
T 3d53_A 1 SMFIKKIKAKAN-NNEINVIIEIPMNSGPIKYEFDKESGALFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHP 79 (173)
T ss_dssp --CGGGSCSCSS-TTCEEEEEEECTTCCSEEEEECTTTCCEEEEEECCSSCCCSSEEEECTTCCCTTSSCCEEEECCSSC
T ss_pred CCCCCCCCCCCC-CCEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCC
T ss_conf 986301778899-9869999996699996548996799989998206888889855413177534679972499975624
Q ss_pred CCCCCEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH
Q ss_conf 67742899869899996047877527999963788822256587789898999999999999642888971898031499
Q gi|254780232|r 81 ILPGSVISTRPIGVMKMEDDGGIDEKILAVPSKNITSLYDSIQSYEDVPNAYLQKVEHFFKHYKDLEDGKWAKLDGWEGV 160 (177)
Q Consensus 81 ~~~G~vv~~r~iG~l~m~D~ge~D~KiiaVp~~d~~~~~~~i~di~Dl~~~~l~~I~~fF~~YK~le~~K~v~v~g~~~~ 160 (177)
+++|++++||+||+|+|+|+||.||||||||+++.+|++++++|++|++++++++|+|||++||+||+||++++.||.|+
T Consensus 80 ~~~G~vv~~r~iG~l~m~D~ge~D~Kiiav~~~~~dp~~~~i~di~dl~~~~l~~I~~fF~~YK~le~gK~v~v~g~~d~ 159 (173)
T 3d53_A 80 VVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFEHYKDLEKGKWVKVTGWGDK 159 (173)
T ss_dssp CCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEEEEECH
T ss_pred CCCCEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCH
T ss_conf 48923999657799997359997023798545678864044688388999899999999999658688993788863699
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999988
Q gi|254780232|r 161 NSAHKIILEAVKRG 174 (177)
Q Consensus 161 ~~A~~iI~~~~~ry 174 (177)
++|.++|++|++||
T Consensus 160 ~~A~~iI~~~~eR~ 173 (173)
T 3d53_A 160 VKAETLIKEGIDRN 173 (173)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999998619
No 7
>3i98_A TH-IPP; pyrophosphatase, beta barrel, hydrolase; 1.85A {Thermococcus thioreducens} PDB: 1ude_A 1twl_A
Probab=100.00 E-value=0 Score=438.58 Aligned_cols=172 Identities=42% Similarity=0.809 Sum_probs=167.1
Q ss_pred CC-CCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCC
Q ss_conf 65-00188665799858999985686873026880665709994214776567778121105535899840289922777
Q gi|254780232|r 2 VQ-LNEISLGSNSPIDVNVFIEISLGGYPIKYEMDKKSGVLVVDRFISTPMLYPGNYGFIPNTLSDDGDPVDVIMYSSEP 80 (177)
Q Consensus 2 m~-~~~i~~~~~~p~~vn~vIEIP~gs~~~KyE~d~~~g~~~~dR~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~ 80 (177)
|| +||||++++.|++||||||||+||+ +|||||+++|.|++||++++++.||+|||||||||++|||||||||+++.|
T Consensus 1 ~spwhdip~~~~~p~~v~~viEIP~gs~-~K~E~d~~~g~~~~dr~~~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~ 79 (178)
T 3i98_A 1 MNPFHELEPGPEVPEVVYALIEIPKGSR-NKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPQTWYDDGDPFDIMVIMREP 79 (178)
T ss_dssp CCHHHHSCSCSBTTTBEEEEEEECTTCS-EEEEECTTTCCEEEEEECSSSCCCSSEEEECTTCCCTTSSCCEEEECCSSC
T ss_pred CCCCCCCCCCCCCCCEEEEEEEECCCCC-CCEEEEECCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCC
T ss_conf 9985468898899986999999899998-368995068976786555778757877202205625799986799964863
Q ss_pred CCCCCEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH
Q ss_conf 67742899869899996047877527999963788822256587789898999999999999642888971898031499
Q gi|254780232|r 81 ILPGSVISTRPIGVMKMEDDGGIDEKILAVPSKNITSLYDSIQSYEDVPNAYLQKVEHFFKHYKDLEDGKWAKLDGWEGV 160 (177)
Q Consensus 81 ~~~G~vv~~r~iG~l~m~D~ge~D~KiiaVp~~d~~~~~~~i~di~Dl~~~~l~~I~~fF~~YK~le~~K~v~v~g~~~~ 160 (177)
+++|++++||+||+|+|+|+||.||||||||++| |++++++|++||+++++++|++||++||+++ ||++++.||.|+
T Consensus 80 ~~~G~vv~~r~iG~l~m~D~ge~D~KiiaV~~~d--p~~~~i~di~dl~~~~l~~I~~fF~~YK~~e-gK~v~v~g~~~~ 156 (178)
T 3i98_A 80 VYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVED--PYFNDWKDISDVPKAFLDEIAHFFQRYKELQ-GKTTKIEGWGNA 156 (178)
T ss_dssp CCTTCEEEEEEEEEEEEEETTEECCEEEEEETTC--GGGTTCCSGGGSCHHHHHHHHHHHHHTTGGG-TCCEEEEEEECH
T ss_pred CCCCCEEEEEEEEEEEEECCCCCEEEEEEEECCC--CCHHHHCCHHHCCHHHHHHHHHHHHHCCCCC-CCCEEECCCCCH
T ss_conf 4784479999979999852899505799776787--3044303586689999999999999738778-996586783699
Q ss_pred HHHHHHHHHHHHHHHCC
Q ss_conf 99999999999988509
Q gi|254780232|r 161 NSAHKIILEAVKRGIKE 177 (177)
Q Consensus 161 ~~A~~iI~~~~~ry~k~ 177 (177)
++|+++|++||+||+++
T Consensus 157 ~~A~k~I~~~~~~y~~~ 173 (178)
T 3i98_A 157 EEAKREILRAIEMYKEK 173 (178)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998
No 8
>2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus HB8} SCOP: b.40.5.1
Probab=100.00 E-value=0 Score=436.34 Aligned_cols=171 Identities=39% Similarity=0.750 Sum_probs=166.1
Q ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCC
Q ss_conf 65001886657998589999856868730268806657099942147765677781211055358998402899227776
Q gi|254780232|r 2 VQLNEISLGSNSPIDVNVFIEISLGGYPIKYEMDKKSGVLVVDRFISTPMLYPGNYGFIPNTLSDDGDPVDVIMYSSEPI 81 (177)
Q Consensus 2 m~~~~i~~~~~~p~~vn~vIEIP~gs~~~KyE~d~~~g~~~~dR~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~~ 81 (177)
-|||+||+|+++|++||||||||+||+ +|||||+++|.|++||++++++.||+|||||||||++||||||||||++.++
T Consensus 1 ~~l~~lp~~~~~p~~vn~viEIP~gs~-~K~E~d~~~g~~~~dr~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~~ 79 (174)
T 2prd_A 1 ANLKSLPVGDKAPEVVHMVIEVPRGSG-NKYEYDPDLGAIKLDRVLPGAQFYPGDYGFIPSTLAEDGDPLDGLVLSTYPL 79 (174)
T ss_dssp CCGGGSCCCTTTTTEEEEEEEECTTCC-EEEEEETTTTEEEEEEECSSSCCCSSEEEECSSCCCTTSSCCEEEEECSSCC
T ss_pred CCHHHCCCCCCCCCEEEEEEEECCCCC-CCEEECCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCEEEEEEECCCC
T ss_conf 977789999999987999999799998-5479866659767762258677488763002665578999718998706656
Q ss_pred CCCCEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCC--CCEEEEECCCC
Q ss_conf 7742899869899996047877527999963788822256587789898999999999999642888--97189803149
Q gi|254780232|r 82 LPGSVISTRPIGVMKMEDDGGIDEKILAVPSKNITSLYDSIQSYEDVPNAYLQKVEHFFKHYKDLED--GKWAKLDGWEG 159 (177)
Q Consensus 82 ~~G~vv~~r~iG~l~m~D~ge~D~KiiaVp~~d~~~~~~~i~di~Dl~~~~l~~I~~fF~~YK~le~--~K~v~v~g~~~ 159 (177)
++|++++||+||+|.|+|+||.|||||||+++| |+++++++++||+++++++|++||++||.+|+ +|++++.||.|
T Consensus 80 ~~G~vv~~r~iG~l~m~D~ge~D~KiIaV~~~d--p~~~~i~~l~dl~~~~~~~I~~fF~~YK~le~k~~~~v~~~g~~d 157 (174)
T 2prd_A 80 LPGVVVEVRVVGLLLMEDEKGGDAKVIGVVAED--QRLDHIQDIGDVPEGVKQEIQHFFETYKALEAKKGKWVKVTGWRD 157 (174)
T ss_dssp CTTCEEEEEEEEEEEEEESSCEEEEEEEEETTC--GGGTTCCSGGGSCHHHHHHHHHHHHHTTGGGGGGTCCEEEEEEEC
T ss_pred CCCCEEEEEEEEEEEEEECCCCEEEEEEEECCC--CCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC
T ss_conf 886679999989999612899640799996899--861344874788999999999999997588677898799866369
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999885
Q gi|254780232|r 160 VNSAHKIILEAVKRGI 175 (177)
Q Consensus 160 ~~~A~~iI~~~~~ry~ 175 (177)
+++|+++|++||+||+
T Consensus 158 ~~~A~~~I~~~~~~yk 173 (174)
T 2prd_A 158 RKAALEEVRACIARYK 173 (174)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 9999999999999857
No 9
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A
Probab=100.00 E-value=0 Score=438.13 Aligned_cols=172 Identities=42% Similarity=0.744 Sum_probs=168.3
Q ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCC
Q ss_conf 65001886657998589999856868730268806657099942147765677781211055358998402899227776
Q gi|254780232|r 2 VQLNEISLGSNSPIDVNVFIEISLGGYPIKYEMDKKSGVLVVDRFISTPMLYPGNYGFIPNTLSDDGDPVDVIMYSSEPI 81 (177)
Q Consensus 2 m~~~~i~~~~~~p~~vn~vIEIP~gs~~~KyE~d~~~g~~~~dR~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~~ 81 (177)
||+++||++++ |+++|||||||+||+ +|||||+++|.+++||++++++.||||||||||||++|||||||||+++.|+
T Consensus 1 m~l~~i~~~~~-~~~~n~viEIP~gs~-~K~E~d~~~g~~~~dr~~~~~~~yP~nYGfiPqT~~~DgDPLDvivl~~~~~ 78 (173)
T 2bqx_A 1 MNLEKLEVSHD-ADSLCVVIEISKHSN-IKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAF 78 (173)
T ss_dssp ------CCCEE-TTEEEEEEEECTTCS-EEEEECTTTCCEEEEEECSSSCCCSSEEEECSSCCCTTSSCCEEEECCSSCC
T ss_pred CCCCCCCCCCC-CCEEEEEEEECCCCC-EEEEEECCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCC
T ss_conf 96100788999-996999999798998-6799924789778986437777488673021654356899707999635546
Q ss_pred CCCCEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
Q ss_conf 77428998698999960478775279999637888222565877898989999999999996428889718980314999
Q gi|254780232|r 82 LPGSVISTRPIGVMKMEDDGGIDEKILAVPSKNITSLYDSIQSYEDVPNAYLQKVEHFFKHYKDLEDGKWAKLDGWEGVN 161 (177)
Q Consensus 82 ~~G~vv~~r~iG~l~m~D~ge~D~KiiaVp~~d~~~~~~~i~di~Dl~~~~l~~I~~fF~~YK~le~~K~v~v~g~~~~~ 161 (177)
++|++++||+||+|.|+|+||.||||||||+++.+|+++++++++|++++++++|++||++||++|++|++++.||.|++
T Consensus 79 ~~G~vi~~r~iG~l~m~D~ge~D~KiiaV~~~~~dp~~~~i~~l~dl~~~~l~~i~~fF~~YK~~e~~k~v~~~g~~d~~ 158 (173)
T 2bqx_A 79 QAGSVVKARLVGVLNMEDESGMDEKLIALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVKGFENKE 158 (173)
T ss_dssp CTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCCTTTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEEEEEEHH
T ss_pred CCCCEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCHHCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHH
T ss_conf 89518999997999737898958707864277888002236984899998999999999998287889869988752999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999885
Q gi|254780232|r 162 SAHKIILEAVKRGI 175 (177)
Q Consensus 162 ~A~~iI~~~~~ry~ 175 (177)
+|.++|++||+||+
T Consensus 159 ~A~~iI~~~~~~~k 172 (173)
T 2bqx_A 159 SAIKVLEKAIKAYQ 172 (173)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999848
No 10
>1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A
Probab=100.00 E-value=0 Score=421.75 Aligned_cols=160 Identities=41% Similarity=0.782 Sum_probs=155.7
Q ss_pred CCEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEE
Q ss_conf 98589999856868730268806657099942147765677781211055358998402899227776774289986989
Q gi|254780232|r 14 PIDVNVFIEISLGGYPIKYEMDKKSGVLVVDRFISTPMLYPGNYGFIPNTLSDDGDPVDVIMYSSEPILPGSVISTRPIG 93 (177)
Q Consensus 14 p~~vn~vIEIP~gs~~~KyE~d~~~g~~~~dR~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~~~~G~vv~~r~iG 93 (177)
.-.+|||||||+||+ +|||||+++|.|++||+|++++.||+|||||||||++|||||||||+++.|+.+|++++|||||
T Consensus 10 ~~~~nvvIEIP~gs~-~KyE~d~~~g~l~~dr~l~~~~~yP~nYGfIP~T~~~DgDPLDvlvl~~~~~~~G~vv~~r~iG 88 (172)
T 1sxv_A 10 HMQFDVTIEIPKGQR-NKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVG 88 (172)
T ss_dssp CCCEEEEEEECTTCC-EEC-CCTTTCCCCCCEECSSSCCCSSEEEEETTCCCTTSSCCEEEECCSSCCCTTCEEEEEEEE
T ss_pred EEEEEEEEEECCCCC-EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEE
T ss_conf 169999999789998-0389956889899997557788788563256764236999727999827668993189999889
Q ss_pred EEEEECCCCCCEEEEEEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 99960478775279999637888222565877898989999999999996428889718980314999999999999998
Q gi|254780232|r 94 VMKMEDDGGIDEKILAVPSKNITSLYDSIQSYEDVPNAYLQKVEHFFKHYKDLEDGKWAKLDGWEGVNSAHKIILEAVKR 173 (177)
Q Consensus 94 ~l~m~D~ge~D~KiiaVp~~d~~~~~~~i~di~Dl~~~~l~~I~~fF~~YK~le~~K~v~v~g~~~~~~A~~iI~~~~~r 173 (177)
+|+|+|+||.||||||||++| |+|+++++++||+++++++|++||++||+||++|++++.||.|+++|.++|++|++|
T Consensus 89 ~l~m~D~ge~D~KIIaV~~~d--p~~~~i~di~Dl~~~~l~~I~~FF~~YK~le~~k~v~v~g~~d~~~A~~iI~~~~~~ 166 (172)
T 1sxv_A 89 MFRMVDEHGGDDKVLCVPAGD--PRWDHVQDIGDVPAFELDAIKHFFVHYKDLEPGKFVKAADWVDRAEAEAEVQRSVER 166 (172)
T ss_dssp EEEEEETTEECCEEEEEETTC--GGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEEEEECHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCEEEEEECCC--CHHCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 999773899854699977787--410254993789998999999999997066889879888756999999999999999
Q ss_pred HHC
Q ss_conf 850
Q gi|254780232|r 174 GIK 176 (177)
Q Consensus 174 y~k 176 (177)
|+.
T Consensus 167 yka 169 (172)
T 1sxv_A 167 FKA 169 (172)
T ss_dssp HHC
T ss_pred HHH
T ss_conf 986
No 11
>1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A
Probab=100.00 E-value=0 Score=393.88 Aligned_cols=170 Identities=25% Similarity=0.333 Sum_probs=150.0
Q ss_pred CCCCCCCCCC-CCEEEEEEEECCCCCCEEEEEECC-----------CCCEEEEECCCCCCCCCCCCCHHHCCCC------
Q ss_conf 0018866579-985899998568687302688066-----------5709994214776567778121105535------
Q gi|254780232|r 4 LNEISLGSNS-PIDVNVFIEISLGGYPIKYEMDKK-----------SGVLVVDRFISTPMLYPGNYGFIPNTLS------ 65 (177)
Q Consensus 4 ~~~i~~~~~~-p~~vn~vIEIP~gs~~~KyE~d~~-----------~g~~~~dR~l~~~~~yP~nYGfiP~T~~------ 65 (177)
+||||++.+. ++++||||||||||+ +|||++++ +|.++++|++++++.||||||||||||+
T Consensus 29 wHDIPl~~d~~~~i~n~VVEIPrgs~-~K~Ei~k~~~~npIkqD~k~G~lr~~r~l~~~~~YP~NYGfIPqTwedp~~~~ 107 (286)
T 1e9g_A 29 FHDIPLYADKENNIFNMVVEIPRWTN-AKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSH 107 (286)
T ss_dssp TTTSCSEEETTTTEEEEEEEECTTCC-BCEEECTTSTTCCEEECEETTEECBCCEETTCCSCSSEEEECSSCCCCTTSEE
T ss_pred CCCCCCCCCCCCCEEEEEEEECCCCC-EEEEECCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 43777888899998999999689997-57997647787841134368978998446777877864454654234865434
Q ss_pred ------CCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHCCCCCHHHC---CHHHHHHH
Q ss_conf ------899840289922777677428998698999960478775279999637888222565877898---98999999
Q gi|254780232|r 66 ------DDGDPVDVIMYSSEPILPGSVISTRPIGVMKMEDDGGIDEKILAVPSKNITSLYDSIQSYEDV---PNAYLQKV 136 (177)
Q Consensus 66 ------~DgDPLDvlvl~~~~~~~G~vv~~r~iG~l~m~D~ge~D~KiiaVp~~d~~~~~~~i~di~Dl---~~~~l~~I 136 (177)
|||||||||+|++.++.+|+|++||+||+|.|+|+||.|||||||+++| |+++++++++|| .|++|++|
T Consensus 108 ~~t~~~GDgDPLDvlvi~~~~~~~G~vi~vkvlG~L~miDeGE~D~KIIaV~~~D--p~~~~indI~Dv~~~~p~~l~~i 185 (286)
T 1e9g_A 108 PETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIND--PLAPKLNDIEDVEKYFPGLLRAT 185 (286)
T ss_dssp TTTTEEBCSSCCEEEECCSSCCCTTCEEEEEEEEEECEEETTEECCEEEEEETTS--TTGGGCCSHHHHHHHSTTHHHHH
T ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEECCC--CCCCCCCCHHHHHHCCHHHHHHH
T ss_conf 4345467899737999526567894289999889988435998643389986788--54100278777655099999999
Q ss_pred HHHHHHHHCCCCCCEEEE---ECCCCHHHHHHHHHHHHHHHHC
Q ss_conf 999999642888971898---0314999999999999998850
Q gi|254780232|r 137 EHFFKHYKDLEDGKWAKL---DGWEGVNSAHKIILEAVKRGIK 176 (177)
Q Consensus 137 ~~fF~~YK~le~~K~v~v---~g~~~~~~A~~iI~~~~~ry~k 176 (177)
++||++||.+++++..++ ++|.++++|+++|++||++|++
T Consensus 186 ~~wF~~YK~~egK~~n~~~~~g~~~~~~~A~~vI~e~h~~wk~ 228 (286)
T 1e9g_A 186 NEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKETHDSWKQ 228 (286)
T ss_dssp HHHHHHTTGGGTCCCCEEGGGGCCBCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999986576799850645247555899999999999999999
No 12
>3d06_A Cellular tumor antigen P53; mutant protein, loop-sheet-helix motif, acetylation, activator, alternative splicing, anti-oncogene, apoptosis; 1.20A {Homo sapiens} PDB: 3d05_A 3d07_A 2ac0_A 2ady_A 2ahi_A 2ata_A 3igl_A* 3kz8_A* 2ocj_A 1tup_A* 1tsr_A 3d08_A 3d0a_A* 3igk_A* 2fej_A 2h1l_M 1ycs_A 3d09_A 1gzh_C 2pcx_A ...
Probab=28.65 E-value=29 Score=14.85 Aligned_cols=39 Identities=0% Similarity=-0.067 Sum_probs=24.3
Q ss_pred CCCCCCCCCCEEEEEEEECCC--CCCEEEEEECCCCCEEEE
Q ss_conf 188665799858999985686--873026880665709994
Q gi|254780232|r 6 EISLGSNSPIDVNVFIEISLG--GYPIKYEMDKKSGVLVVD 44 (177)
Q Consensus 6 ~i~~~~~~p~~vn~vIEIP~g--s~~~KyE~d~~~g~~~~d 44 (177)
.+|.-.+.|+.+|+=|.+..- +.+..|.|.+..+.|.+.
T Consensus 3 ~~Ps~~~ypG~y~F~v~~~~~~~~ks~~wtYS~~LnKLfv~ 43 (200)
T 3d06_A 3 SVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQ 43 (200)
T ss_dssp -CCCCCCBCTTTTCEEECC-------CCEEEETTTTEEEEC
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCEEECHHHCEEEEC
T ss_conf 78767776886634998177898776876854053887772
No 13
>1q1o_A Cell division control protein 24; PB1 domain, PCCR, PC motif, OPCA motif, yeast, cell polarity, protein-protein interaction; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 2kfj_A 2kfk_B
Probab=26.76 E-value=14 Score=16.81 Aligned_cols=42 Identities=24% Similarity=0.412 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHH-------------HHCCCCCCEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 999999999999-------------6428889718980314999999999999998
Q gi|254780232|r 131 AYLQKVEHFFKH-------------YKDLEDGKWAKLDGWEGVNSAHKIILEAVKR 173 (177)
Q Consensus 131 ~~l~~I~~fF~~-------------YK~le~~K~v~v~g~~~~~~A~~iI~~~~~r 173 (177)
.++++|...|.+ |++ |.|-||.+..=.|-++|..+.+++++|
T Consensus 37 dL~~kI~~Kl~~~~~~~i~~~~~lkY~D-edgd~V~l~~d~D~~~~~d~~~~~~~r 91 (98)
T 1q1o_A 37 DLIMAINSKISNTHNNNISPITKIKYQD-EDGDFVVLGSDEDWNVAKEMLAENNEK 91 (98)
T ss_dssp HHHHHHHHHHHHHCSSCCCCCCCEEEEC-SSSCEEEECSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCEEEEEC-CCCCEEEEECHHHHHHHHHHHHHHCCC
T ss_conf 9999999997313676666432058884-899999995026799999998750577
No 14
>2dhx_A Poly (ADP-ribose) polymerase family, member 10 variant; RRM domain, RNA- binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.32 E-value=36 Score=14.23 Aligned_cols=37 Identities=8% Similarity=0.162 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHCCCCCCEEEE--------ECCCCHHHHHHHHHH
Q ss_conf 9999999999642888971898--------031499999999999
Q gi|254780232|r 133 LQKVEHFFKHYKDLEDGKWAKL--------DGWEGVNSAHKIILE 169 (177)
Q Consensus 133 l~~I~~fF~~YK~le~~K~v~v--------~g~~~~~~A~~iI~~ 169 (177)
-++|+.+|+.|+....+.-+.+ ..|.+.+.|.++|+.
T Consensus 22 ~~~L~~~F~~~g~~~~g~v~~~~~~~g~gFV~F~~~~~a~~al~~ 66 (104)
T 2dhx_A 22 DELLTLYFENRRRSGGGPVLSWQRLGCGGVLTFREPADAERVLAQ 66 (104)
T ss_dssp HHHHHHHHHCTTTTCCCCEEEEEEETTEEEEEESSHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEECHHHHHHHHHC
T ss_conf 899999998539855269999776188589999278999999855
No 15
>2xip_A Tumour protein P73; phosphoprotein, tumor suppressor, transcription, metal-bindi nucleus, cell cycle, transcription regulation; HET: TAM; 1.82A {Homo sapiens}
Probab=22.16 E-value=38 Score=14.09 Aligned_cols=38 Identities=8% Similarity=0.019 Sum_probs=23.0
Q ss_pred CCCCCCCCCEEEEEEEEC--CCCCCEEEEEECCCCCEEEE
Q ss_conf 886657998589999856--86873026880665709994
Q gi|254780232|r 7 ISLGSNSPIDVNVFIEIS--LGGYPIKYEMDKKSGVLVVD 44 (177)
Q Consensus 7 i~~~~~~p~~vn~vIEIP--~gs~~~KyE~d~~~g~~~~d 44 (177)
+|.-.+.|+.+|+=|.++ .-+.+.-|.|.+..+.|.+.
T Consensus 5 ~Ps~~~ypG~y~F~v~~~~~~~~Ks~~wtYS~~LnKLfv~ 44 (208)
T 2xip_A 5 IPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQ 44 (208)
T ss_dssp CCCCCCBCTTTTCEEECCCCCCSTTCSEEEETTTTEEEEC
T ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCEEECHHHCCEEEE
T ss_conf 8867765886645999248998666877964476816783
No 16
>1h6w_A Bacteriophage T4 short tail fibre; structural protein, gene product 12, adhesin, fibrous protein; 1.9A {Bacteriophage T4} SCOP: b.108.1.1 d.231.1.1
Probab=21.14 E-value=17 Score=16.36 Aligned_cols=18 Identities=11% Similarity=-0.055 Sum_probs=8.6
Q ss_pred CCCCCCCHHHCCCCCCCC
Q ss_conf 677781211055358998
Q gi|254780232|r 52 LYPGNYGFIPNTLSDDGD 69 (177)
Q Consensus 52 ~yP~nYGfiP~T~~~DgD 69 (177)
.||--|.-+|.||+|||+
T Consensus 287 ~yP~La~~~gs~~gg~g~ 304 (312)
T 1h6w_A 287 DCPLYASRIGTRYGGSSS 304 (312)
T ss_dssp TCHHHHHHHTTTTSBCSS
T ss_pred HHHHHHHHCCCCCCCCCC
T ss_conf 528899754875446786
No 17
>2o0q_A Hypothetical protein CC0527; PSI, protein structure initiative, northeast structural genomics consortium, NESG, structural genomics; 1.80A {Caulobacter vibrioides} SCOP: d.166.1.7 PDB: 2jqn_A 2o0p_A
Probab=20.84 E-value=41 Score=13.92 Aligned_cols=38 Identities=18% Similarity=0.157 Sum_probs=20.8
Q ss_pred CCEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHCC
Q ss_conf 98589999856868730268806657099942147765677781211055
Q gi|254780232|r 14 PIDVNVFIEISLGGYPIKYEMDKKSGVLVVDRFISTPMLYPGNYGFIPNT 63 (177)
Q Consensus 14 p~~vn~vIEIP~gs~~~KyE~d~~~g~~~~dR~l~~~~~yP~nYGfiP~T 63 (177)
++.+=+.|..-+=..++|||-.+. ...||+=||-+|-.
T Consensus 54 ~~lvlL~id~~~l~~~l~wE~~~~------------~~~FPHiYG~L~~~ 91 (115)
T 2o0q_A 54 ANLVLLAVEAEPLGEDLKWEASRG------------GARFPHLYRPLLVS 91 (115)
T ss_dssp CSEEEEEEESGGGCTTEEEEECGG------------GCEEEEESSCEEGG
T ss_pred CCEEEEEECHHHCCCCEEEEECCC------------CCCCCCCCCCCCHH
T ss_conf 874999975999398748860899------------98356336878978
Done!