HHsearch alignment for GI: 254780233 and conserved domain: COG0486

>COG0486 ThdF Predicted GTPase [General function prediction only].
Probab=99.05  E-value=2.4e-09  Score=80.58  Aligned_cols=148  Identities=24%  Similarity=0.258  Sum_probs=99.6

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCCC--CCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCHHH
Q ss_conf             4999854689877889999998396142--32200000388577987096064679999989979999728987540799
Q gi|254780233|r   21 NIAIIAHVDHGKTTLVDELLKQSGVFRD--NQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFGGE   98 (624)
Q Consensus        21 NiaIiaHvDhGKTTL~d~LL~~sG~~~~--~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~gE   98 (624)
T Consensus       219 kvvIiG~PNvGKSSLLNaL~~~d~AIVTdI~GTTR----D----------vi---ee~i~i~G~pv~l~DTAGiRet~d~  281 (454)
T COG0486         219 KVVIIGRPNVGKSSLLNALLGRDRAIVTDIAGTTR----D----------VI---EEDINLNGIPVRLVDTAGIRETDDV  281 (454)
T ss_pred             EEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCC----C----------EE---EEEEEECCEEEEEEECCCCCCCCCH
T ss_conf             49998799886799999886678667428999741----0----------37---8999989889999856776667348


Q ss_pred             HH-----HHH---HHHCEEEEEEECCCCCC-HHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCH
Q ss_conf             99-----998---74217899997687886-4789999999972997899997543667402568999998886226730
Q gi|254780233|r   99 VE-----RIL---CMVESVVVLVDAAEGPM-PQTKFVVGKALKIGLRPIVVVNKVDRSDARADEVINEVFDLFSALDATD  169 (624)
Q Consensus        99 Ve-----r~l---~~~DgaiLvVdA~eGv~-~QT~~vl~~A~~~~l~~IvvINKiDr~~a~~~~v~~ei~dlf~~l~a~d  169 (624)
T Consensus       282 VE~iGIeRs~~~i~~ADlvL~v~D~~~~~~~~d~~~~~--~~~~~~~~i~v~NK~DL~~~~~~~~~--------~~~---  348 (454)
T COG0486         282 VERIGIERAKKAIEEADLVLFVLDASQPLDKEDLALIE--LLPKKKPIIVVLNKADLVSKIELESE--------KLA---  348 (454)
T ss_pred             HHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHH--HCCCCCCEEEEEECHHCCCCCCCCHH--------HCC---
T ss_conf             99999999999998599899997088777601177887--24368977999960211564321012--------026---


Q ss_pred             HHCCHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             110426688788659164674223348641355532102454
Q gi|254780233|r  170 AQLDFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHVPP  211 (624)
Q Consensus       170 e~ld~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~iP~  211 (624)
T Consensus       349 --~~~~~i~iSa~t~-----------~Gl~~L~~~i~~~~~~  377 (454)
T COG0486         349 --NGDAIISISAKTG-----------EGLDALREAIKQLFGK  377 (454)
T ss_pred             --CCCCEEEEEECCC-----------CCHHHHHHHHHHHHHH
T ss_conf             --7882699982576-----------5799999999999863