HHsearch alignment for GI: 254780233 and conserved domain: PRK00741
>PRK00741 prfC peptide chain release factor 3; Provisional.
Probab=100.00 E-value=0 Score=666.88 Aligned_cols=409 Identities=24% Similarity=0.400 Sum_probs=330.5
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCC------EECCCCHHHHHCCCEEEEEEEEEEECCEEEEEEC
Q ss_conf 8024314999854689877889999998396142322000------0038857798709606467999998997999972
Q gi|254780233|r 15 GYMQIRNIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSE------RVMDCNDLEKERGITILAKVTSIVWNDVRINIVD 88 (624)
Q Consensus 15 ~~~~IRNiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~------~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiD 88 (624)
T Consensus 6 ei~~~RniaIi~H~dAGKTTLtE~lL~~~GaI~~~G~V~~~~~~~~~~sD~~~~E~~RgiSI~ssv~~~e~~~~~iNliD 85 (526)
T PRK00741 6 EVAKRRTFAIISHPDAGKTTLTEKLLLFGGAIQEAGTVKGRKSGRHATSDWMEMEKQRGISVTSSVMQFPYRDCLINLLD 85 (526)
T ss_pred HHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCEEECCEEEEEECCEEEEEEE
T ss_conf 87611779999378989899999999746752448466314678864678858899759648615177867898999990
Q ss_pred CCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH----
Q ss_conf 8987540799999987421789999768788647899999999729978999975436674025689999988862----
Q gi|254780233|r 89 TPGHADFGGEVERILCMVESVVVLVDAAEGPMPQTKFVVGKALKIGLRPIVVVNKVDRSDARADEVINEVFDLFSA---- 164 (624)
Q Consensus 89 TPGH~DF~gEVer~l~~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~IvvINKiDr~~a~~~~v~~ei~dlf~~---- 164 (624)
T Consensus 86 TPGh~DF~~e~~raL~a~D~Av~Vida~~GVe~qTe~~w~~~~~~~iP~i~FINKmDR~~ad~~~~l~ei~~~lg~~~~p 165 (526)
T PRK00741 86 TPGHEDFSEDTYRTLTAVDSALMVIDAAKGVEPQTRKLMEVCRLRDTPIFTFINKLDRDGREPLELLDEIEEVLGIACAP 165 (526)
T ss_pred CCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEE
T ss_conf 98946778999999987375999997775523336899999886399889999656767898789887788874787368
Q ss_pred ----------------C-----------------------CCCH-------------------HHC--------------
Q ss_conf ----------------2-----------------------6730-------------------110--------------
Q gi|254780233|r 165 ----------------L-----------------------DATD-------------------AQL-------------- 172 (624)
Q Consensus 165 ----------------l-----------------------~a~d-------------------e~l-------------- 172 (624)
T Consensus 166 ~~~Pig~g~~F~GvvDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~el~~~~~~~~d~~~~~~ 245 (526)
T PRK00741 166 ITWPIGMGKRFKGVYDLYNDEVELYQPGHGHTIQEFEIIKGLDNPELDEALGEDLAEQLREELELVQGASNEFDLEAFLA 245 (526)
T ss_pred EEEECCCCCCEEEEEEECCCEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC
T ss_conf 88303678860378880138799803677884046605877877899987538999975535777731555106899973
Q ss_pred --CHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCCCCCCC----------CCCHHHCCCCCCCC--CC-CCCEEEE
Q ss_conf --426688788659164674223348641355532102454223----------32000001111013--67-7734999
Q gi|254780233|r 173 --DFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHVPPPVI----------SEGEFKMIGTILEK--DP-FLGRIVT 237 (624)
Q Consensus 173 --d~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~iP~P~~----------~e~pl~~~V~~i~~--d~-y~Gria~ 237 (624)
T Consensus 246 G~l~PVf~GSA~~n-----------~GV~~LLd~iv~~~PsP~~r~~~~~~v~p~~~~fsa~VFKiqanmDP~h~griaf 314 (526)
T PRK00741 246 GELTPVFFGSALNN-----------FGVQEFLDAFVEWAPAPQPRQTDERVVEPTEEKFSGFVFKIQANMDPKHRDRIAF 314 (526)
T ss_pred CCEEEEEEEECCCC-----------CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEE
T ss_conf 98028996200036-----------5699999999997799877777765447877774359999984037542543799
Q ss_pred EEECCCCCCCCCEEEEECCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
Q ss_conf 99607805159889996057850121145530110366534441125455432222332101221105565211233666
Q gi|254780233|r 238 GRIHSGTIKSNQNIKALSPDGALVEVGRVSKILAFRGIDRQPIDEAHAGDIVSIAGLVKATVADTFCDPSIDEPLKAQPI 317 (624)
Q Consensus 238 gRV~sGtlk~Gd~V~vl~~~g~~~~~~kV~~L~~~~G~~r~~v~ea~AGDIvaIaGl~~~~iGDTL~~~~~p~~Lp~i~i 317 (624)
T Consensus 315 ~RV~SG~l~~g~~v~n~r-~g---k~eri~~l~~~~g~~r~~V~ea~AGDIvgl~~~~~~~tGDTL~~~~-~l~~~~Ip~ 389 (526)
T PRK00741 315 MRVCSGKFEKGMKVRHVR-TG---KDVRISNALTFMAQDREHVEEAYAGDIIGLHNHGTIQIGDTFTEGE-KLKFTGIPN 389 (526)
T ss_pred EEEEEEEECCCCEEEECC-CC---CEEEHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCEECCCC-CCCCCCCCC
T ss_conf 997511885799898525-79---5366326778744352351387699899971666300375520688-521068899
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHC-CEEEE
Q ss_conf 65421578612686554444321017889999999730283799998599975999963645688887412334-80330
Q gi|254780233|r 318 DPPTVTMTFGVNDSPLAGTEGDKVTSRMIRDRLFKEAEGNIALKIEESSSKDAFFVSGRGELQLAVLIETMRRE-GFELA 396 (624)
Q Consensus 318 ~~Ptis~~f~vn~sP~ag~eg~~~ts~~l~~rL~ke~~~dvsL~ve~~~~~~~~~v~GrGeLHL~IliE~mRRE-G~E~~ 396 (624)
T Consensus 390 f~P~~~~~v~~~~~---~~------~kkl~~gL~~L~EEd~-~~v~~~~~t~e~il~gmGeLHlEVv~~RLk~eygVev~ 459 (526)
T PRK00741 390 FAPELFRRVRLKNP---LK------QKQLQKGLVQLSEEGA-VQVFRPLSNNDLILGAVGQLQFEVVAHRLKNEYNVEAI 459 (526)
T ss_pred CCCCEEEEEEECCH---HH------HHHHHHHHHHHCCCCC-EEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHCCEEE
T ss_conf 99755799887988---88------9999999998554786-69887388998899971688999999999887397289
Q ss_pred CCCCEEEEEEECCEECCEEEEEEEECCHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEEEECHHHHHHHHH
Q ss_conf 157448998208826041688887313233107899887435401042136898499999961335656889
Q gi|254780233|r 397 VSRPRVVIKKEGDSLLEPIEEVVIDVDEEHSGAVVQKMTLHKSEMIELRPSGTGRVRLVFLSPTRGLIGYQS 468 (624)
Q Consensus 397 vs~P~V~~k~~dg~~lEPie~v~I~vp~ey~G~Vi~~l~~RrG~i~~m~~~~~g~~~l~~~vP~r~l~g~~~ 468 (624)
T Consensus 460 ~e~~-------------~~~~arw~~~~~--~~~~~~~~~~~~~~~~~d--~~~~--~~~l~~~~~~~~~~~ 512 (526)
T PRK00741 460 YEPV-------------GVATARWVECDD--AKKLEEFKRKNRSNLALD--GGDN--LVYLAPNEVNLRLAQ 512 (526)
T ss_pred ECCC-------------CEEEEEEECCCC--HHHHHHHHHHCCCEEEEC--CCCC--EEEEECCHHHHHHHH
T ss_conf 7157-------------437999745899--899999874315708990--8989--899974988988899