HHsearch alignment for GI: 254780233 and conserved domain: PRK11537
>PRK11537 putative GTP-binding protein YjiA; Provisional.
Probab=96.61 E-value=0.035 Score=33.51 Aligned_cols=135 Identities=21% Similarity=0.353 Sum_probs=68.8
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCC------CCCCCCCCEECCCCHHHHHCC--C-EEEEE--EEEEEE-------
Q ss_conf 43149998546898778899999983961------423220000038857798709--6-06467--999998-------
Q gi|254780233|r 18 QIRNIAIIAHVDHGKTTLVDELLKQSGVF------RDNQRVSERVMDCNDLEKERG--I-TILAK--VTSIVW------- 79 (624)
Q Consensus 18 ~IRNiaIiaHvDhGKTTL~d~LL~~sG~~------~~~~~v~~~vmD~~~~EreRG--I-TI~a~--~~~~~~------- 79 (624)
T Consensus 3 ~IPVtiltGFLGaGKTTlL~~lL~~~~~~riaVivNEfGev~---iD~~li~-~~~~~v~eL~nGCiCCs~~~dl~~~l~ 78 (317)
T PRK11537 3 PIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVS---VDDQLIG-DRATQIKTLTNGCICCSRSNELEDALL 78 (317)
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCC---CHHHHHH-CCCCCEEEECCCCEEEEECCHHHHHHH
T ss_conf 768899830888899999999972778997899983761453---3298873-565326884477368730522899999
Q ss_pred ------C--C--EEEEEECCCCCCCCHHHHHH-----HH---HHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf ------9--9--79999728987540799999-----98---74217899997687886478999999997299789999
Q gi|254780233|r 80 ------N--D--VRINIVDTPGHADFGGEVER-----IL---CMVESVVVLVDAAEGPMPQTKFVVGKALKIGLRPIVVV 141 (624)
Q Consensus 80 ------~--~--~~iNiiDTPGH~DF~gEVer-----~l---~~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~IvvI 141 (624)
T Consensus 79 ~l~~~~~~~~~~~D~IiIEtsGlAdP~~I~~~~~~~~~l~~~~~Ld~vVtvVDa~~~~~~l~~~~~~-~~Qi~~AD~ill 157 (317)
T PRK11537 79 DLLDNLDRGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFTIA-QSQVGYADRILL 157 (317)
T ss_pred HHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHHCCHHH-HHHHHHCCEEEE
T ss_conf 9998664357775479996257788399999986125656532036559998665557665303466-766631868997
Q ss_pred ECCCCCCCCHHHHHHHH
Q ss_conf 75436674025689999
Q gi|254780233|r 142 NKVDRSDARADEVINEV 158 (624)
Q Consensus 142 NKiDr~~a~~~~v~~ei 158 (624)
T Consensus 158 nK~Dlv~~~-~~l~~~l 173 (317)
T PRK11537 158 TKTDVAGEA-EKLRERL 173 (317)
T ss_pred ECCCCCCHH-HHHHHHH
T ss_conf 420023659-9999999