HHsearch alignment for GI: 254780233 and conserved domain: TIGR01007
>TIGR01007 eps_fam capsular exopolysaccharide family; InterPro: IPR005702 This family describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis (EPS). At least 13 genes EpsA to EpsM in streptococcus species seem to direct the EPS proteins and share high homology. ; GO: 0030234 enzyme regulator activity, 0045227 capsule polysaccharide biosynthetic process.
Probab=92.60 E-value=0.79 Score=24.65 Aligned_cols=130 Identities=26% Similarity=0.267 Sum_probs=69.9
Q ss_pred CCCCCCCCEEEEEC-CCCCCHHHHHHHHHHHCCCCCCCCCC--------CCEECCC--CHHHHHCCCE-EEEEEEE----
Q ss_conf 46802431499985-46898778899999983961423220--------0000388--5779870960-6467999----
Q gi|254780233|r 13 RLGYMQIRNIAIIA-HVDHGKTTLVDELLKQSGVFRDNQRV--------SERVMDC--NDLEKERGIT-ILAKVTS---- 76 (624)
Q Consensus 13 ~~~~~~IRNiaIia-HvDhGKTTL~d~LL~~sG~~~~~~~v--------~~~vmD~--~~~EreRGIT-I~a~~~~---- 76 (624)
T Consensus 13 S~a~~e~K~l~itS~~~~eGKsT~S~NiA---~~fAqaGyKTLlIDgD~R~sv~~~~Fk~~n~~~GLtn~L~g~~dl~~~ 89 (207)
T TIGR01007 13 SGAEQEIKVLLITSVKAGEGKSTTSANIA---VSFAQAGYKTLLIDGDMRNSVMSGTFKSQNKIKGLTNFLSGNTDLSDA 89 (207)
T ss_pred CCCCCCEEEEEEEECCCCCCCEEEEHHHH---HHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHH
T ss_conf 03578705899841105888624107889---999856855888754658660367865888765633322145453334
Q ss_pred -----E-E------------------------------ECCEEEEEECCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCC
Q ss_conf -----9-9------------------------------899799997289875407999999874217899997687886
Q gi|254780233|r 77 -----I-V------------------------------WNDVRINIVDTPGHADFGGEVERILCMVESVVVLVDAAEGPM 120 (624)
Q Consensus 77 -----~-~------------------------------~~~~~iNiiDTPGH~DF~gEVer~l~~~DgaiLvVdA~eGv~ 120 (624)
T Consensus 90 i~~T~isenL~vi~sG~vPPNPt~LL~s~~F~~l~e~~~~~fD~iiiDTPPig~V~DAa-i~a~~~d~~~LV~~A~~~-- 166 (207)
T TIGR01007 90 ICETNISENLDVITSGPVPPNPTELLQSSNFKTLIETLRKYFDYIIIDTPPIGTVIDAA-IIARAVDASILVTDAGKI-- 166 (207)
T ss_pred HHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH-HHHHHHCCEEEEEECCCC--
T ss_conf 20265467872751788787754788889999999998716888999518866678899-999872977988722532--
Q ss_pred HHHHHHHHHHHH----CCCCEE-EEEECCCCCCCC
Q ss_conf 478999999997----299789-999754366740
Q gi|254780233|r 121 PQTKFVVGKALK----IGLRPI-VVVNKVDRSDAR 150 (624)
Q Consensus 121 ~QT~~vl~~A~~----~~l~~I-vvINKiDr~~a~ 150 (624)
T Consensus 167 --~k~~v~KAK~~LEq~G~~~LGvvLNK~d~s~~~ 199 (207)
T TIGR01007 167 --KKREVKKAKEQLEQAGSKFLGVVLNKVDISVDK 199 (207)
T ss_pred --CHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
T ss_conf --646789999999861784115888882576556