HHsearch alignment for GI: 254780233 and conserved domain: TIGR03594
>TIGR03594 GTPase_EngA ribosome-associated GTPase EngA. EngA (YfgK, Der) is a ribosome-associated essential GTPase with a duplication of its GTP-binding domain. It is broadly to universally distributed among bacteria. It appears to function in ribosome biogenesis or stability.
Probab=99.71 E-value=4.4e-16 Score=124.82 Aligned_cols=156 Identities=25% Similarity=0.382 Sum_probs=117.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCC----CH-
Q ss_conf 9998546898778899999983961423220000038857798709606467999998997999972898754----07-
Q gi|254780233|r 22 IAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHAD----FG- 96 (624)
Q Consensus 22 iaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~D----F~- 96 (624)
T Consensus 2 VaIvGrpNVGKStLfN~L~~~~~aI-----v~~----------~~G~TRD~~~~~~~~~~~~~~liDT~G~~~~~~~~~~ 66 (429)
T TIGR03594 2 VAIVGRPNVGKSTLFNRLTGKRDAI-----VAD----------TPGVTRDRKYGDAEWGGREFILIDTGGIEEDDDGLDK 66 (429)
T ss_pred EEEECCCCCCHHHHHHHHHCCCEEE-----CCC----------CCCCCCCCEEEEEEECCEEEEEEECCCCCCCCHHHHH
T ss_conf 8999999987899999987886176-----159----------8998877337999999907999989898987437899
Q ss_pred ---HHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHCC
Q ss_conf ---99999987421789999768788647899999999729978999975436674025689999988862267301104
Q gi|254780233|r 97 ---GEVERILCMVESVVVLVDAAEGPMPQTKFVVGKALKIGLRPIVVVNKVDRSDARADEVINEVFDLFSALDATDAQLD 173 (624)
Q Consensus 97 ---gEVer~l~~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~IvvINKiDr~~a~~~~v~~ei~dlf~~l~a~de~ld 173 (624)
T Consensus 67 ~~~~q~~~ai~~aDlIlfVvD~~~git~~D~~i~~~Lrk~~k~vilviNK~D~~~--~~~~~~---e-f~~LG~~~---- 136 (429)
T TIGR03594 67 QIREQAEIAIEEADVILFVVDGREGLTPEDEEIAKWLRKSGKPVILVANKIDGKK--EDAVAA---E-FYSLGFGE---- 136 (429)
T ss_pred HHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC--HHHHHH---H-HHHHCCCC----
T ss_conf 9999999999867999999857768986799999999871997899998346753--145699---9-99836898----
Q ss_pred HHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf 266887886591646742233486413555321024542233
Q gi|254780233|r 174 FPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHVPPPVIS 215 (624)
Q Consensus 174 ~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~iP~P~~~ 215 (624)
T Consensus 137 --~i~iSA~h~-----------~Gi~~L~~~i~~~l~~~~~~ 165 (429)
T TIGR03594 137 --PIPISAEHG-----------RGIGDLLDAILELLPEEEEE 165 (429)
T ss_pred --EEEEEECCC-----------CCHHHHHHHHHHHCCCCCCC
T ss_conf --688742046-----------79999999999658866555