HHsearch alignment for GI: 254780233 and conserved domain: cd01868

>cd01868 Rab11_like Rab11-like. Rab11a, Rab11b, and Rab25 are closely related, evolutionary conserved Rab proteins that are differentially expressed. Rab11a is ubiquitously synthesized, Rab11b is enriched in brain and heart and Rab25 is only found in epithelia. Rab11/25 proteins seem to regulate recycling pathways from endosomes to the plasma membrane and to the trans-Golgi network. Furthermore, Rab11a is thought to function in the histamine-induced fusion of tubulovesicles containing H+, K+ ATPase with the plasma membrane in gastric parietal cells and in insulin-stimulated insertion of GLUT4 in the plasma membrane of cardiomyocytes. Overexpression of Rab25 has recently been observed in ovarian cancer and breast cancer, and has been correlated with worsened outcomes in both diseases. In addition, Rab25 overexpression has also been observed in prostate cancer, transitional cell carcinoma of the bladder, and invasive breast tumor cells. GTPase activating proteins (GAPs) interact with GTP
Probab=99.07  E-value=2e-09  Score=81.05  Aligned_cols=156  Identities=15%  Similarity=0.181  Sum_probs=94.4

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCHHHHH
Q ss_conf             49998546898778899999983961423220000038857798709606467999998997999972898754079999
Q gi|254780233|r   21 NIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFGGEVE  100 (624)
Q Consensus        21 NiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~gEVe  100 (624)
T Consensus         5 Kiv~iGd~~VGKTsli~r~~~--~~f~~~~~---------~---Tig~~~~~k~i~~~~~~~~l~iwDtaG~e~~~~~~~   70 (165)
T cd01868           5 KIVLIGDSGVGKSNLLSRFTR--NEFNLDSK---------S---TIGVEFATRSIQIDGKTIKAQIWDTAGQERYRAITS   70 (165)
T ss_pred             EEEEECCCCCCHHHHHHHHHH--CCCCCCCC---------C---CCCEEEEEEEEEECCEEEEEEEEECCCCHHHHHHHH
T ss_conf             999999999789999999972--98999889---------8---744787899999999999999998999721267899


Q ss_pred             HHHHHHCEEEEEEECCCCCCHHHHHHHHHHH-H---CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHH
Q ss_conf             9987421789999768788647899999999-7---29978999975436674025689999988862267301104266
Q gi|254780233|r  101 RILCMVESVVVLVDAAEGPMPQTKFVVGKAL-K---IGLRPIVVVNKVDRSDARADEVINEVFDLFSALDATDAQLDFPI  176 (624)
Q Consensus       101 r~l~~~DgaiLvVdA~eGv~~QT~~vl~~A~-~---~~l~~IvvINKiDr~~a~~~~v~~ei~dlf~~l~a~de~ld~Pv  176 (624)
T Consensus        71 ~~~~~a~~~ilvydit~~~Sf~~i~~w~~~i~~~~~~~~~iilVgnK~DL~~~r~V-s~~e~~~~a~-------~~~~~~  142 (165)
T cd01868          71 AYYRGAVGALLVYDITKKQTFENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV-PTEEAKAFAE-------KNGLSF  142 (165)
T ss_pred             HHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCC-CHHHHHHHHH-------HCCCEE
T ss_conf             87332051489862698899999999999999855577359870234786885788-8999999999-------859979


Q ss_pred             HHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf             887886591646742233486413555321024
Q gi|254780233|r  177 LYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHV  209 (624)
Q Consensus       177 ~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~i  209 (624)
T Consensus       143 ~E~SAk~g-----------~nV~e~F~~l~~~i  164 (165)
T cd01868         143 IETSALDG-----------TNVEEAFKQLLTEI  164 (165)
T ss_pred             EEECCCCC-----------CCHHHHHHHHHHHH
T ss_conf             99678889-----------29899999999986