>cd01878 HflX HflX subfamily. A distinct conserved domain with a glycine-rich segment N-terminal of the GTPase domain characterizes the HflX subfamily. The E. coli HflX has been implicated in the control of the lambda cII repressor proteolysis, but the actual biological functions of these GTPases remain unclear. HflX is widespread, but not universally represented in all three superkingdoms.

Probab=99.44 E-value=1.3e-12 Score=102.07 Aligned_cols=152 Identities=22% Similarity=0.263 Sum_probs=92.1 Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEE-CCEEEEEECCCC-CCCC Q ss_conf 43149998546898778899999983961423220000038857798709606467999998-997999972898-7540 Q gi|254780233|r 18 QIRNIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVW-NDVRINIVDTPG-HADF 95 (624) Q Consensus 18 ~IRNiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~-~~~~iNiiDTPG-H~DF 95 (624) T Consensus 40 g~p~VaivG~PNvGKSTLlN~L~---g~~---~~v~~----~~------~tT~d~~~~~i~~~~~~~i~l~DT~G~i~~~ 103 (204) T cd01878 40 GIPTVALVGYTNAGKSTLFNALT---GAD---VYAED----QL------FATLDPTTRRLRLPDGREVLLTDTVGFIRDL 103 (204) T ss_pred CCCEEEEECCCCCCHHHHHHHHH---CCC---CEEEC----CC------CCCCCCEEEEEEECCCCEEEEEECCCCCCCC T ss_conf 99879998899998999999994---899---63415----67------7645763668995699779998368644678 Q ss_pred HHH-HH---H---HHHHHCEEEEEEECCCCCC-HHHH---HHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH Q ss_conf 799-99---9---9874217899997687886-4789---9999999729978999975436674025689999988862 Q gi|254780233|r 96 GGE-VE---R---ILCMVESVVVLVDAAEGPM-PQTK---FVVGKALKIGLRPIVVVNKVDRSDARADEVINEVFDLFSA 164 (624) Q Consensus 96 ~gE-Ve---r---~l~~~DgaiLvVdA~eGv~-~QT~---~vl~~A~~~~l~~IvvINKiDr~~a~~~~v~~ei~dlf~~ 164 (624) T Consensus 104 p~~lie~~~~tle~i~~AD~il~vvD~s~~~~~~~~~~~~~~l~~l~~~~k~~i~V~NKiDl~~~~--~~~----~~~~~ 177 (204) T cd01878 104 PHQLVEAFRSTLEEVAEADLLLHVVDASDPDYEEQIETVEKVLKELGAEDIPMILVLNKIDLLDDE--ELE----ERLEA 177 (204) T ss_pred CHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCH--HHH----HHHHH T ss_conf 378999999999999739899999979985366779999999998065557607888670479957--589----99970 Q ss_pred CCCCHHHCCHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCC Q ss_conf 267301104266887886591646742233486413555321024 Q gi|254780233|r 165 LDATDAQLDFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHV 209 (624) Q Consensus 165 l~a~de~ld~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~i 209 (624) T Consensus 178 -------~~~~~i~ISA~~g-----------~Gid~L~~~I~e~L 204 (204) T cd01878 178 -------GRPDAVFISAKTG-----------EGLDELLEAIEELL 204 (204) T ss_pred -------CCCCEEEEECCCC-----------CCHHHHHHHHHHHC T ss_conf -------8998799988689-----------49999999999559

HHsearch alignment for GI: 254780233 and conserved domain: cd01878