HHsearch alignment for GI: 254780233 and conserved domain: cd01879

>cd01879 FeoB Ferrous iron transport protein B (FeoB) subfamily. E. coli has an iron(II) transport system, known as feo, which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.
Probab=99.48  E-value=5.2e-13  Score=104.64  Aligned_cols=147  Identities=27%  Similarity=0.428  Sum_probs=95.5

Q ss_pred             EECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCH---HH--
Q ss_conf             9854689877889999998396142322000003885779870960646799999899799997289875407---99--
Q gi|254780233|r   24 IIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFG---GE--   98 (624)
Q Consensus        24 IiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~---gE--   98 (624)
T Consensus         1 ivG~pNvGKSTL~N~L~---g~---~~~vs----~------~pgtTrd~~~~~~~~~~~~~~lvDtpGi~~~~~~~~~e~   64 (158)
T cd01879           1 LVGNPNVGKTTLFNALT---GA---RQKVG----N------WPGVTVEKKEGRFKLGGKEIEIVDLPGTYSLSPYSEDEK   64 (158)
T ss_pred             CCCCCCCCHHHHHHHHH---CC---CCEEC----C------CCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCCHHHH
T ss_conf             97989888999999995---99---86461----7------898276347889962993799997987412564135678


Q ss_pred             HHHHH---HHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHH-HHHHHHHHHHCCCCHHHCCH
Q ss_conf             99998---742178999976878864789999999972997899997543667402568-99999888622673011042
Q gi|254780233|r   99 VERIL---CMVESVVVLVDAAEGPMPQTKFVVGKALKIGLRPIVVVNKVDRSDARADEV-INEVFDLFSALDATDAQLDF  174 (624)
Q Consensus        99 Ver~l---~~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~IvvINKiDr~~a~~~~v-~~ei~dlf~~l~a~de~ld~  174 (624)
T Consensus        65 i~~~~~~~~~~d~vl~vvD~~~-~~-~~l~~~~~l~~~~~p~ivV~NK~D~~~~~~~~~~~~~l~----------~~~~~  132 (158)
T cd01879          65 VARDFLLGEKPDLIVNVVDATN-LE-RNLYLTLQLLELGLPVVVALNMIDEAEKRGIKIDLDKLS----------ELLGV  132 (158)
T ss_pred             HHHHHHHHCCCCCEEEEEECCH-HH-HHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCHHHHHHHH----------HHCCC
T ss_conf             9999998517871799977740-67-768999999865998899940277655225466799999----------87199


Q ss_pred             HHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf             66887886591646742233486413555321024
Q gi|254780233|r  175 PILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHV  209 (624)
Q Consensus       175 Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~i  209 (624)
T Consensus       133 ~ii~iSA~~g-----------~Gi~~L~~~i~el~  156 (158)
T cd01879         133 PVVPTSARKG-----------EGIDELKDAIAELA  156 (158)
T ss_pred             CEEEEECCCC-----------CCHHHHHHHHHHHH
T ss_conf             4899987789-----------79999999999986