HHsearch alignment for GI: 254780233 and conserved domain: cd02036
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=97.60 E-value=0.0005 Score=45.62 Aligned_cols=127 Identities=15% Similarity=0.236 Sum_probs=72.2
Q ss_pred EEEE-CCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHH----------HHHCCCEEEEEEEEEEECCEEEEEECCC
Q ss_conf 9998-5468987788999999839614232200000388577----------9870960646799999899799997289
Q gi|254780233|r 22 IAII-AHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDL----------EKERGITILAKVTSIVWNDVRINIVDTP 90 (624)
Q Consensus 22 iaIi-aHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~----------EreRGITI~a~~~~~~~~~~~iNiiDTP 90 (624)
T Consensus 2 Iav~s~KGGVGKTT~a~NLA~---aLa~~g~~-vllvD~D~~~~~l~~~~~~~~~~~~~~----~~vl~gD~--viiD~p 71 (179)
T cd02036 2 IVVTSGKGGVGKTTTTANLGT---ALAQLGYK-VVLIDADLGLRNLDLILGLENRVVYTL----HDVLAGDY--ILIDSP 71 (179)
T ss_pred EEEECCCCCCHHHHHHHHHHH---HHHHCCCC-EEEEECCCCCCCCHHHCCCCCCCCCHH----HCCCCCCE--EEEECC
T ss_conf 899739998709999999999---99977991-899958999998366617655665313----11266999--999799
Q ss_pred CCCCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEE-EEEECCCCCCCCHHHHHHHHHH
Q ss_conf 875407999999874217899997687886478999999997299789-9997543667402568999998
Q gi|254780233|r 91 GHADFGGEVERILCMVESVVVLVDAAEGPMPQTKFVVGKALKIGLRPI-VVVNKVDRSDARADEVINEVFD 160 (624)
Q Consensus 91 GH~DF~gEVer~l~~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~I-vvINKiDr~~a~~~~v~~ei~d 160 (624)
T Consensus 72 pg~~--~~~~~~l~~ad~vlvv~~p~~~sl~~~~~~~~~~~~~~~~~~~vv~Nr~~~~~~~~~~~~~~~~~ 140 (179)
T cd02036 72 AGIE--RGFITAIAPADEALLVTTPEISSLRDADRVKGLLEALGIKVVGVIVNRVRPDMVEGGDMVEDIEE 140 (179)
T ss_pred CCCC--HHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHH
T ss_conf 9988--89999998468125637885889999999999998259964699984546766636779999998