HHsearch alignment for GI: 254780233 and conserved domain: cd04129

>cd04129 Rho2 Rho2 subfamily. Rho2 is a fungal GTPase that plays a role in cell morphogenesis, control of cell wall integrity, control of growth polarity, and maintenance of growth direction. Rho2 activates the protein kinase C homolog Pck2, and Pck2 controls Mok1, the major (1-3) alpha-D-glucan synthase. Together with Rho1 (RhoA), Rho2 regulates the construction of the cell wall. Unlike Rho1, Rho2 is not an essential protein, but its overexpression is lethal. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for proper intracellular localization via membrane attachment. As with other Rho family GTPases, the GDP/GTP cycling is regulated by GEFs (guanine nucleotide exchange factors), GAPs (GTPase-activating proteins) and GDIs (guanine nucleotide dissociation inhibitors).
Probab=98.59  E-value=5.1e-07  Score=65.30  Aligned_cols=154  Identities=14%  Similarity=0.120  Sum_probs=89.2

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCHHHHH
Q ss_conf             49998546898778899999983961423220000038857798709606467999998997999972898754079999
Q gi|254780233|r   21 NIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFGGEVE  100 (624)
Q Consensus        21 NiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~gEVe  100 (624)
T Consensus         3 KivllGd~~VGKTsLi~r~~~--~~f~~~y~--pTi~~~-----------~~~~i~v~~~~v~l~iwDTaG~e~~~~~~~   67 (187)
T cd04129           3 KLVIVGDGACGKTSLLSVFTL--GEFPEEYH--PTVFEN-----------YVTDCRVDGKPVQLALWDTAGQEEYERLRP   67 (187)
T ss_pred             EEEEECCCCCCHHHHHHHHHH--CCCCCCCC--CCEEEE-----------EEEEEEECCEEEEEEEEECCCCCCCCCCCC
T ss_conf             999999899768999999982--98999878--866789-----------899999999999999997888703454604


Q ss_pred             HHHHHHCEEEEEEECCCCCCHHHH----HHHHHHH---HCCCCEEEEEECCCCCCCCH--------HHHH-HHHHHHHHH
Q ss_conf             998742178999976878864789----9999999---72997899997543667402--------5689-999988862
Q gi|254780233|r  101 RILCMVESVVVLVDAAEGPMPQTK----FVVGKAL---KIGLRPIVVVNKVDRSDARA--------DEVI-NEVFDLFSA  164 (624)
Q Consensus       101 r~l~~~DgaiLvVdA~eGv~~QT~----~vl~~A~---~~~l~~IvvINKiDr~~a~~--------~~v~-~ei~dlf~~  164 (624)
T Consensus        68 ~~~~~a~~~ilvydi~~~---~Sf~~~~~~w~~~~~~~~~~~piilVGnK~DL~~~~~~~~~~~~~r~V~~~~g~~~a~~  144 (187)
T cd04129          68 LSYSKAHVILIGFAVDTP---DSLENVRTKWIEEVRRYCPNVPVILVGLKKDLRQDAVAKEEYRTQRFVPIQQGKRVAKE  144 (187)
T ss_pred             CEECCCCEEEEECCCCCH---HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHH
T ss_conf             123388589997026986---67999999999999985879988999886001134112111223155789999999998


Q ss_pred             CCCCHHHCCHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf             267301104266887886591646742233486413555321024
Q gi|254780233|r  165 LDATDAQLDFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHV  209 (624)
Q Consensus       165 l~a~de~ld~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~i  209 (624)
T Consensus       145 ~~~~------~y~EtSAk~~-----------~nV~e~F~~~~r~~  172 (187)
T cd04129         145 IGAK------KYMECSALTG-----------EGVDDVFEAATRAA  172 (187)
T ss_pred             CCCC------EEEEECCCCC-----------CCHHHHHHHHHHHH
T ss_conf             4997------8999688999-----------79899999999999