HHsearch alignment for GI: 254780233 and conserved domain: cd04145
>cd04145 M_R_Ras_like M-Ras/R-Ras-like subfamily. This subfamily contains R-Ras2/TC21, M-Ras/R-Ras3, and related members of the Ras family. M-Ras is expressed in lympho-hematopoetic cells. It interacts with some of the known Ras effectors, but appears to also have its own effectors. Expression of mutated M-Ras leads to transformation of several types of cell lines, including hematopoietic cells, mammary epithelial cells, and fibroblasts. Overexpression of M-Ras is observed in carcinomas from breast, uterus, thyroid, stomach, colon, kidney, lung, and rectum. In addition, expression of a constitutively active M-Ras mutant in murine bone marrow induces a malignant mast cell leukemia that is distinct from the monocytic leukemia induced by H-Ras. TC21, along with H-Ras, has been shown to regulate the branching morphogenesis of ureteric bud cell branching in mice. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an ali
Probab=99.02 E-value=3.5e-09 Score=79.51 Aligned_cols=155 Identities=17% Similarity=0.188 Sum_probs=97.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCHHHHH
Q ss_conf 49998546898778899999983961423220000038857798709606467999998997999972898754079999
Q gi|254780233|r 21 NIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFGGEVE 100 (624)
Q Consensus 21 NiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~gEVe 100 (624)
T Consensus 4 Kiv~lGd~~VGKTsli~r~~~--~~f~~~y~--~Ti----------~~~-~~k~~~~~~~~~~l~iwDtaG~e~~~~~~~ 68 (164)
T cd04145 4 KLVVVGGGGVGKSALTIQFIQ--SYFVTDYD--PTI----------EDS-YTKQCEIDGQWAILDILDTAGQEEFSAMRE 68 (164)
T ss_pred EEEEECCCCCCHHHHHHHHHC--CCCCCCCC--CCE----------EEE-EEEEEEECCEEEEEEEEECCCCCCCCHHHH
T ss_conf 999999999788999999980--98987567--841----------358-999999999999999998988603125679
Q ss_pred HHHHHHCEEEEEEECCCCCCHHH-HHHHHHHHH----CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHH
Q ss_conf 99874217899997687886478-999999997----2997899997543667402568999998886226730110426
Q gi|254780233|r 101 RILCMVESVVVLVDAAEGPMPQT-KFVVGKALK----IGLRPIVVVNKVDRSDARADEVINEVFDLFSALDATDAQLDFP 175 (624)
Q Consensus 101 r~l~~~DgaiLvVdA~eGv~~QT-~~vl~~A~~----~~l~~IvvINKiDr~~a~~~~v~~ei~dlf~~l~a~de~ld~P 175 (624)
T Consensus 69 ~~~~~a~~~ilvydi~~~~Sf~~~~~~~~~i~~~~~~~~~piilVgNK~DL~~~r~V-s~~e~~~~a~~-------~~~~ 140 (164)
T cd04145 69 QYMRTGEGFLLVFSVTDRGSFEEVDKFHTQILRVKDRDEFPMILVGNKADLEHQRKV-SREEGQELARK-------LKIP 140 (164)
T ss_pred HHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCCC-CHHHHHHHHHH-------CCCE
T ss_conf 873467874689856735439999999999998618877752653034573540889-99999999998-------1998
Q ss_pred HHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 6887886591646742233486413555321024
Q gi|254780233|r 176 ILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHV 209 (624)
Q Consensus 176 v~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~i 209 (624)
T Consensus 141 ~~E~SAk~~-----------~nV~e~F~~l~~~I 163 (164)
T cd04145 141 YIETSAKDR-----------LNVDKAFHDLVRVI 163 (164)
T ss_pred EEEECCCCC-----------CCHHHHHHHHHHHH
T ss_conf 999854868-----------27799999999975