>cd04165 GTPBP1_like GTPBP1-like. Mammalian GTP binding protein 1 (GTPBP1), GTPBP2, and nematode homologs AGP-1 and CGP-1 are GTPases whose specific functions remain unknown. In mouse, GTPBP1 is expressed in macrophages, in smooth muscle cells of various tissues and in some neurons of the cerebral cortex; GTPBP2 tissue distribution appears to overlap that of GTPBP1. In human leukemia and macrophage cell lines, expression of both GTPBP1 and GTPBP2 is enhanced by interferon-gamma (IFN-gamma). The chromosomal location of both genes has been identified in humans, with GTPBP1 located in chromosome 22q12-13.1 and GTPBP2 located in chromosome 6p21-12. Human glioblastoma multiforme (GBM), a highly-malignant astrocytic glioma and the most common cancer in the central nervous system, has been linked to chromosomal deletions and a translocation on chromosome 6. The GBM translocation results in a fusion of GTPBP2 and PTPRZ1, a protein involved in oligodendrocyte differentiation, recovery, and

Probab=99.95 E-value=9.9e-28 Score=201.27 Aligned_cols=176 Identities=24% Similarity=0.290 Sum_probs=124.5 Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCC-EECCCCHHHHHCCCEEEEEE------------------------EE Q ss_conf 999854689877889999998396142322000-00388577987096064679------------------------99 Q gi|254780233|r 22 IAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSE-RVMDCNDLEKERGITILAKV------------------------TS 76 (624) Q Consensus 22 iaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~-~vmD~~~~EreRGITI~a~~------------------------~~ 76 (624) T Consensus 2 v~v~GhVD~GKSTL~G~Lt--~g~lD-dGrg~ar~~~~rh~hE~~~G~Tssi~~~~lgf~~~g~~~~~~~~~~~~~~~~~ 78 (224) T cd04165 2 VAVVGNVDAGKSTLLGVLT--QGELD-NGRGKARLNLFRHKHEVESGRTSSVSNEILGFDSDGEVVNYPDNHLSESDIEI 78 (224) T ss_pred EEEEECCCCCHHHHHHHHH--CCCCC-CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCEEE T ss_conf 8999485884889999985--67742-22106777877618999726544115655401014532021347654422012 Q ss_pred EEECCEEEEEECCCCCCCCHHHHHHHHH--HHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC-CCHHH Q ss_conf 9989979999728987540799999987--42178999976878864789999999972997899997543667-40256 Q gi|254780233|r 77 IVWNDVRINIVDTPGHADFGGEVERILC--MVESVVVLVDAAEGPMPQTKFVVGKALKIGLRPIVVVNKVDRSD-ARADE 153 (624) Q Consensus 77 ~~~~~~~iNiiDTPGH~DF~gEVer~l~--~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~IvvINKiDr~~-a~~~~ 153 (624) T Consensus 79 ~~~~~k~it~iD~pGH~~y~kt~i~G~~~~~~d~~~LvV~A~~G~~~~T~ehl~l~~~l~ip~~vvitKiDl~~~~~l~~ 158 (224) T cd04165 79 CEKSSKLVTFIDLAGHERYLKTTLFGLTGYAPDYAMLVVAANAGIIGMTKEHLGLALALNIPVFVVVTKIDLAPANILQE 158 (224) T ss_pred ECCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHH T ss_conf 13678679999788739999999987635568989999317889779999999999983999899998977689899999 Q ss_pred HHHHHHHHHHHCCC---------CHHH------C----CHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCCCCC Q ss_conf 89999988862267---------3011------0----4266887886591646742233486413555321024542 Q gi|254780233|r 154 VINEVFDLFSALDA---------TDAQ------L----DFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHVPPP 212 (624) Q Consensus 154 v~~ei~dlf~~l~a---------~de~------l----d~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~iP~P 212 (624) T Consensus 159 ~~~~i~~~lk~p~~~k~p~~v~~~~d~~~~a~~~~~~~ivPIf~vS~VtG-----------~Gi~-~L~~fL~~LP~r 224 (224) T cd04165 159 TLKDLKRILKVPGVRKLPVPVKSDDDVVLAASNFSSERIVPIFQVSNVTG-----------EGLD-LLHAFLNLLPLR 224 (224) T ss_pred HHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCEEEEECCCC-----------CCHH-HHHHHHHHCCCC T ss_conf 99999999704475568702168588999986488677746799765898-----------7999-999999876999

HHsearch alignment for GI: 254780233 and conserved domain: cd04165