HHsearch alignment for GI: 254780233 and conserved domain: pfam00025
>pfam00025 Arf ADP-ribosylation factor family. Pfam combines a number of different Prosite families together
Probab=99.59 E-value=4.8e-14 Score=111.42 Aligned_cols=155 Identities=20% Similarity=0.283 Sum_probs=105.4
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCHHHH
Q ss_conf 14999854689877889999998396142322000003885779870960646799999899799997289875407999
Q gi|254780233|r 20 RNIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFGGEV 99 (624)
Q Consensus 20 RNiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~gEV 99 (624)
T Consensus 15 ~Ki~llG~~~vGKTsll~~~~--~~~~~~---~-------~p---Tig~~----~~~v~~~~~~~~iwDt~Gqe~~~~~~ 75 (174)
T pfam00025 15 MRILILGLDNAGKTTILYKLK--LGEIVT---T-------IP---TIGFN----VETVTYKNVKFTVWDVGGQESLRPLW 75 (174)
T ss_pred EEEEEECCCCCCHHHHHHHHH--CCCCCC---C-------CC---CCCCE----EEEEEECCEEEEEEECCCCCCCCHHH
T ss_conf 699999999998899999995--499887---4-------47---46823----89999899999998279870232679
Q ss_pred HHHHHHHCEEEEEEECCCCC-CHHHHHHHHHHHH----CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCH
Q ss_conf 99987421789999768788-6478999999997----299789999754366740256899999888622673011042
Q gi|254780233|r 100 ERILCMVESVVVLVDAAEGP-MPQTKFVVGKALK----IGLRPIVVVNKVDRSDARADEVINEVFDLFSALDATDAQLDF 174 (624)
Q Consensus 100 er~l~~~DgaiLvVdA~eGv-~~QT~~vl~~A~~----~~l~~IvvINKiDr~~a~~~~v~~ei~dlf~~l~a~de~ld~ 174 (624)
T Consensus 76 ~~y~~~a~~ii~V~D~t~~~s~~~~~~~l~~~l~~~~~~~~piliv~NK~DL~~~~~~~ei~~~~~~~---~~~--~~~~ 150 (174)
T pfam00025 76 RNYFPNTDAVIFVVDSADRDRIEEAKEELHALLNEEELADAPLLILANKQDLPGAMSEAEIRELLGLH---ELK--SRPW 150 (174)
T ss_pred HHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH---HCC--CCCC
T ss_conf 98841782689998678678799999999998754235897089987256676789999999999786---441--7996
Q ss_pred HHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 66887886591646742233486413555321024
Q gi|254780233|r 175 PILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHV 209 (624)
Q Consensus 175 Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~i 209 (624)
T Consensus 151 ~~~~~SAktG-----------~gI~e~f~~L~~~I 174 (174)
T pfam00025 151 EIQGCSAVTG-----------EGLDEGLDWLSNYI 174 (174)
T ss_pred EEEEEECCCC-----------CCHHHHHHHHHHHC
T ss_conf 8999988679-----------59899999999539