HHsearch alignment for GI: 254780233 and conserved domain: pfam00071
>pfam00071 Ras Ras family. Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See pfam00009 pfam00025, pfam00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices.
Probab=99.26 E-value=5e-11 Score=91.58 Aligned_cols=150 Identities=17% Similarity=0.195 Sum_probs=97.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECC--EEEEEECCCCCCCCHHHH
Q ss_conf 999854689877889999998396142322000003885779870960646799999899--799997289875407999
Q gi|254780233|r 22 IAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWND--VRINIVDTPGHADFGGEV 99 (624)
Q Consensus 22 iaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~--~~iNiiDTPGH~DF~gEV 99 (624)
T Consensus 2 i~vvG~~~vGKTsli~r~~~--~~f~~~~~--------------~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~e~~~~~~ 65 (162)
T pfam00071 2 LVLVGDGGVGKSSLLIRFTQ--NKFPEEYI--------------PTIGVDFYTKTIEVDGKTVKLQIWDTAGQERFRALR 65 (162)
T ss_pred EEEECCCCCCHHHHHHHHHH--CCCCCCCC--------------CCCEEEEEEEEEEECCEEEEEEEEECCCCHHHHHHH
T ss_conf 89999799779999999961--99998747--------------741355678999999999999999789872046788
Q ss_pred HHHHHHHCEEEEEEECCCCCCHHHH---HHHH-HHHH---CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHC
Q ss_conf 9998742178999976878864789---9999-9997---2997899997543667402568999998886226730110
Q gi|254780233|r 100 ERILCMVESVVVLVDAAEGPMPQTK---FVVG-KALK---IGLRPIVVVNKVDRSDARADEVINEVFDLFSALDATDAQL 172 (624)
Q Consensus 100 er~l~~~DgaiLvVdA~eGv~~QT~---~vl~-~A~~---~~l~~IvvINKiDr~~a~~~~v~~ei~dlf~~l~a~de~l 172 (624)
T Consensus 66 ~~~~~~ad~~iivfd~~~---~~S~~~i~~~~~~i~~~~~~~~piilvgnK~Dl~~~~~i-~~~e~~~~a~-------~~ 134 (162)
T pfam00071 66 PLYYRGAQGFLLVYDITS---RDSFENVKKWLEEILRHADDNVPIVLVGNKCDLEDQRVV-STEEGEALAK-------EL 134 (162)
T ss_pred HHHHCCCCCCEEECCCCC---HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCC-CHHHHHHHHH-------HH
T ss_conf 998625765504234898---899999999999999857988628899752474651889-9999999999-------80
Q ss_pred CHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 4266887886591646742233486413555321024
Q gi|254780233|r 173 DFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHV 209 (624)
Q Consensus 173 d~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~i 209 (624)
T Consensus 135 ~~~y~e~Sak~g-----------~gI~~~F~~i~~~i 160 (162)
T pfam00071 135 GLPFMETSAKTN-----------ENVEEAFEELAREI 160 (162)
T ss_pred CCEEEEECCCCC-----------CCHHHHHHHHHHHH
T ss_conf 997999737888-----------29999999999996