HHsearch alignment for GI: 254780233 and conserved domain: pfam00448
>pfam00448 SRP54 SRP54-type protein, GTPase domain. This family includes relatives of the G-domain of the SRP54 family of proteins.
Probab=96.56 E-value=0.066 Score=31.74 Aligned_cols=134 Identities=20% Similarity=0.287 Sum_probs=72.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCC---HHHHHC------CCEEEEEEEE-------------EE
Q ss_conf 4999854689877889999998396142322000003885---779870------9606467999-------------99
Q gi|254780233|r 21 NIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCN---DLEKER------GITILAKVTS-------------IV 78 (624)
Q Consensus 21 NiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~---~~EreR------GITI~a~~~~-------------~~ 78 (624)
T Consensus 3 vi~lvGptGvGKTTTiaKLAa~~~--~~~~~V~lit~Dt~R~gA~eQL~~ya~~l~v~~~~~~~~~d~~~~~~~~l~~~~ 80 (196)
T pfam00448 3 VILLVGLQGSGKTTTIAKLAAYLK--KQGKKVLLVAADTFRAAAIEQLKQLAERLGVPVFGSGTGSDPAAVAFDAVEKAK 80 (196)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH--HCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 999989999988999999999999--779928999758776889999999998639817814877787899999999988
Q ss_pred ECCEEEEEECCCCCCCC----HHHHHHHHHH--HCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHH
Q ss_conf 89979999728987540----7999999874--21789999768788647899999999729978999975436674025
Q gi|254780233|r 79 WNDVRINIVDTPGHADF----GGEVERILCM--VESVVVLVDAAEGPMPQTKFVVGKALKIGLRPIVVVNKVDRSDARAD 152 (624)
Q Consensus 79 ~~~~~iNiiDTPGH~DF----~gEVer~l~~--~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~IvvINKiDr~~a~~~ 152 (624)
T Consensus 81 ~~~~D~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~LVl~a~~~~~~~-~~~~~f~~~~~~~-~~I~TKlDe-t~~~G 157 (196)
T pfam00448 81 AENYDVVLVDTAGRLQNDKNLMDELKKIKRVIAPDEVLLVLDATTGQNAL-NQAKAFNEAVGIT-GVILTKLDG-DAKGG 157 (196)
T ss_pred HCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH-HHHHHHHHHCCCC-CEEEEEECC-CCCCC
T ss_conf 46899999989998747677899999998522873028998567782137-8999876004776-268884057-88752
Q ss_pred HHHHHHH
Q ss_conf 6899999
Q gi|254780233|r 153 EVINEVF 159 (624)
Q Consensus 153 ~v~~ei~ 159 (624)
T Consensus 158 ~~l~~~~ 164 (196)
T pfam00448 158 AALSIAA 164 (196)
T ss_pred HHHHHHH
T ss_conf 9998999