HHsearch alignment for GI: 254780233 and conserved domain: pfam01926
>pfam01926 MMR_HSR1 GTPase of unknown function.
Probab=99.25 E-value=1e-10 Score=89.53 Aligned_cols=98 Identities=28% Similarity=0.353 Sum_probs=76.1
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCC--------HHHHHHH
Q ss_conf 87788999999839614232200000388577987096064679999989979999728987540--------7999999
Q gi|254780233|r 31 GKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADF--------GGEVERI 102 (624)
Q Consensus 31 GKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF--------~gEVer~ 102 (624)
T Consensus 1 GKSsLiN~L~~~~-----~~~v~----------~~~gtT~~~~~~~~~~~~~~i~liDTPGi~~~~~~~~~~~~~~~~~~ 65 (106)
T pfam01926 1 GKSTLINALTGKK-----RAIVS----------DYPGTTRDPNEGRVELDGKQIILVDTPGIIEGASKGEGELGNRTLEA 65 (106)
T ss_pred CHHHHHHHHHCCC-----CEEEC----------CCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHH
T ss_conf 9127999997888-----55552----------88998846355899889988999837873226504678889999972
Q ss_pred HHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 87421789999768788647899999999729978999975
Q gi|254780233|r 103 LCMVESVVVLVDAAEGPMPQTKFVVGKALKIGLRPIVVVNK 143 (624)
Q Consensus 103 l~~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~IvvINK 143 (624)
T Consensus 66 ~~~~d~il~viD~~~~~~~~d~~~~~~l~~~~~p~iiv~NK 106 (106)
T pfam01926 66 IEEADLILHVVDASEGLTEEDLEILDLLLELGKPVILVLNK 106 (106)
T ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 34573799999999999989999999999869988999939