RPSBLAST alignment for GI: 254780233 and conserved domain: cd03700

>gnl|CDD|58091 cd03700, eEF2_snRNP_like_II, EF2_snRNP_like_II: this subfamily represents domain II of elongation factor (EF) EF-2 found eukaryotes and archaea and, the C-terminal portion of the spliceosomal human 116kD U5 small nuclear ribonucleoprotein (snRNP) protein (U5-116 kD) and, its yeast counterpart Snu114p. During the process of peptide synthesis and tRNA site changes, the ribosome is moved along the mRNA a distance equal to one codon with the addition of each amino acid. This translocation step is catalyzed by EF-2_GTP, which is hydrolyzed to provide the required energy. Thus, this action releases the uncharged tRNA from the P site and transfers the newly formed peptidyl-tRNA from the A site to the P site. Yeast Snu114p is essential for cell viability and for splicing in vivo. U5-116 kD binds GTP. Experiments suggest that GTP binding and probably GTP hydrolysis is important for the function of the U5-116 kD/Snu114p.. Length = 93
 Score = 44.4 bits (105), Expect = 1e-04
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 235 IVTGRIHSGTIKSNQNIKALSP-----DGALVEVGRVSKILAFRGIDRQPIDEAHAGDIV 289
           I  GR+ SGTI+  Q ++ L P     D   +    + ++    G  R+P+DE  AG+IV
Sbjct: 18  IAFGRVFSGTIRKGQKVRVLGPNYSPEDEEDLSKKTIQRLYLMMGRYREPVDEVPAGNIV 77

Query: 290 SIAGLVKATVADT 302
            I GL +     T
Sbjct: 78  LIVGLDQLKSGTT 90