HHsearch alignment for GI: 254780234 and conserved domain: COG0037
>COG0037 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning].
Probab=99.18 E-value=1.3e-09 Score=89.39 Aligned_cols=149 Identities=26% Similarity=0.302 Sum_probs=106.4
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCC-CEEEEEEEECCCC----CHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 7899991477259999999987189-8699999457871----1068999999973980799820089999987999973
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKG-LEVIVFIADLGQG----EELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFR 80 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g-~eVi~~~~d~Gq~----~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ 80 (404)
T Consensus 22 ~~ilVavSGGkDS~~ll~~L~~l~~~~~~~a~~Vd~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~---- 96 (298)
T COG0037 22 YKILVAVSGGKDSLALLHLLKELGRRIEVEAVHVDHGLRGYSDQEAELVEKLCEKLGI-PLIVERVTDDLGRETLD---- 96 (298)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCC-CEEEEEHHHHHHHCCCC----
T ss_conf 8589993787899999999998422573899997089886432899999999996499-84886204543100246----
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHH------HHH----HHHHCC-----CC-EEE
Q ss_conf 68654787420130124335999999988568928750011168215679------999----998587-----97-077
Q gi|254780234|r 81 ANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRF------ELS----AYSLNS-----DI-EII 144 (404)
Q Consensus 81 ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRF------e~~----~~~l~P-----~l-~vi 144 (404)
T Consensus 97 ------~--~~~c~~c~~~R~~~l~~~a~~~g~~~i~tgH~--~dD~~et~lm~l~~g~~~~~l~~~~~~~~~~~~~~~i 166 (298)
T COG0037 97 ------G--KSICAACRRLRRGLLYKIAKELGADKIATGHH--LDDQAETFLMNLLRGSGLRGLRGMPPKRPFEGGLLII 166 (298)
T ss_pred ------C--CCHHHHHHHHHHHHHHHHHHHCCCCEEEECCC--HHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEE
T ss_conf ------7--67879999999999999999859998985678--4689999999986175224564088524457886454
Q ss_pred EEECCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 4410068763799999999708967566
Q gi|254780234|r 145 APWRHWSFKGRQDLIDFAEKHAIPIDKN 172 (404)
Q Consensus 145 aP~Rd~~~~sRe~~i~ya~~~gIpv~~~ 172 (404)
T Consensus 167 RPL~~--~-~~~ei~~~~~~~~l~~~~d 191 (298)
T COG0037 167 RPLLY--V-REKEIELYAKEKGLPYIED 191 (298)
T ss_pred CCCCC--C-CHHHHHHHHHHCCCCEECC
T ss_conf 75746--8-8999999999759987517