HHsearch alignment for GI: 254780234 and conserved domain: PRK01269
>PRK01269 thiamine biosynthesis protein ThiI; Provisional.
Probab=98.29 E-value=9.9e-05 Score=54.26 Aligned_cols=148 Identities=18% Similarity=0.310 Sum_probs=99.3
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHH----CCC---EEEEEECHHHHHHHHHHHHH
Q ss_conf 78999914772599999999871898699999457871106899999997----398---07998200899999879999
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARL----LGA---KEVYVKDLRREFVRDFVFPM 78 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~----~Ga---~~~~v~D~r~ef~~~~i~~~ 78 (404)
T Consensus 178 GkvL~LlSGGiDSPVA-a~~mmKRG~~v~~l~F~lg~~~~e~~V~~va~~L~~~~~~~~~vr~~~V~f~~-v~~eI~-~- 253 (483)
T PRK01269 178 EDVLSLISGGFDSGVA-SYMLMRRGSRVHYCFFNLGGAAHEIGVKQVAHYLWNRYGSSHRVRFISVDFEP-VVGEIL-E- 253 (483)
T ss_pred CCEEEEECCCCCCHHH-HHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHH-HHHHHH-H-
T ss_conf 8689995278883888-99998459879999957998688999999999999973888870899976799-999998-7-
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECH-HHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHH
Q ss_conf 73686547874201301243359999999885689287500-11168215679999998587970774410068763799
Q gi|254780234|r 79 FRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHG-STGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQD 157 (404)
Q Consensus 79 I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG-~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~ 157 (404)
T Consensus 254 -~v----~~~~~~-v-v~KR~M~R~A~~iA~~~g~~ALVTGESLGQVASQTL~NL~~i~~~~~~pVlRPLI--g~D-K~e 323 (483)
T PRK01269 254 -KV----DNGQMG-V-VLKRMMLRAASKVAERYGIQALVTGEALGQVSSQTLTNLRLIDNVTDTLILRPLI--AMD-KED 323 (483)
T ss_pred -HC----CHHHEE-H-HHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEECCCC--CCC-HHH
T ss_conf -38----763443-9-9999999999999998599889855503456776787889988740774004766--798-899
Q ss_pred HHHHHHHHCC
Q ss_conf 9999997089
Q gi|254780234|r 158 LIDFAEKHAI 167 (404)
Q Consensus 158 ~i~ya~~~gI 167 (404)
T Consensus 324 II~~Ar~IGT 333 (483)
T PRK01269 324 IIDLARQIGT 333 (483)
T ss_pred HHHHHHHHCH
T ss_conf 9999998392