HHsearch alignment for GI: 254780234 and conserved domain: PRK02628
>PRK02628 nadE NAD synthetase; Reviewed.
Probab=97.04 E-value=0.013 Score=39.17 Aligned_cols=201 Identities=21% Similarity=0.255 Sum_probs=113.0
Q ss_pred CCEEEEEECCCHHHHHHH----HHHHHHCC---CEEEEEEEE-CCC-CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHH
Q ss_conf 778999914772599999----99987189---869999945-787-110689999999739807998200899999879
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIIL----KWLQVEKG---LEVIVFIAD-LGQ-GEELKIASDKARLLGAKEVYVKDLRREFVRDFV 75 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i----~~L~~e~g---~eVi~~~~d-~Gq-~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i 75 (404)
T Consensus 362 ~~~vViGLSGGiDSaLaLLVaa~A~-d~Lg~~r~~V~~vtMPs~~TS~~S~~dA~~La~~LGi-~~~~I~I~~a~~-~~~ 438 (678)
T PRK02628 362 IKKVVIGISGGLDSTLALLVAAKAF-DRLGLPRKNILAYTMPGFGTTDRTKNNAVALMKALGV-TAREIDIRPAAL-QML 438 (678)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHH-HHHCCCHHCEEEEECCCCCCCHHHHHHHHHHHHHCCC-CEEEEEHHHHHH-HHH
T ss_conf 9818996777644799999999999-9848971224899778876578789999999997299-779976299999-999
Q ss_pred HHHHH-----C----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHH--HHHH--CCCCE
Q ss_conf 99973-----6----8654787420130124335999999988568928750011168215679999--9985--87970
Q gi|254780234|r 76 FPMFR-----A----NALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELS--AYSL--NSDIE 142 (404)
Q Consensus 76 ~~~I~-----a----na~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~--~~~l--~P~l~ 142 (404)
T Consensus 439 -~di~~~~~~~~~~~Dvt~EN----iQAR~R---~~iLM~laNk~g~LVL~TGN--------kSElAvGy~Ty~yGD~mg 502 (678)
T PRK02628 439 -KDIGHPFARGEKVYDVTFEN----VQAGER---TQILFRLANQRGGLVIGTGD--------LSELALGWCTYGVGDHMS 502 (678)
T ss_pred -HHHCCHHHCCCCCCCCHHHH----HHHHHH---HHHHHHHHCCCCCEEEECCC--------CCHHHHCEECCCCCCCCC
T ss_conf -98444222378776602665----203556---78999974577967973685--------146864831047754124
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCEE
Q ss_conf 77441006876379999999970896756656788641572431154576324584576820100146581227999638
Q gi|254780234|r 143 IIAPWRHWSFKGRQDLIDFAEKHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVSPEEAPDTPTT 222 (404)
Q Consensus 143 viaP~Rd~~~~sRe~~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~p~~ap~~pe~ 222 (404)
T Consensus 503 ~yavn~~VpKTlV~~L~r~~a~~~~~~~------~~---------------------~~vl~~Il~tpiSpEL~P~~--- 552 (678)
T PRK02628 503 HYNVNASVPKTLIQHLIRWVAESGQFDE------AV---------------------SEVLLDILDTPISPELVPPD--- 552 (678)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCC------CH---------------------HHHHHHHCCCCCCCCCCCCC---
T ss_conf 6244678837899999999986244453------11---------------------25689854699991427988---
Q ss_pred EEEEEECCEEEEECCEECCHHHHHHHHHHHHHHCCCC
Q ss_conf 9999950247875162318999999998886421637
Q gi|254780234|r 223 IRIDFQRGDPIAINGQVMSPEVLLEQLNQYGRCNGIG 259 (404)
Q Consensus 223 v~I~Fe~G~PVainG~~~~~~~li~~LN~igg~~GvG 259 (404)
T Consensus 553 -----~~~~i~QktEd~lgPYel~Df~Ly~~lr~g~~ 584 (678)
T PRK02628 553 -----EEGEIVQKTEDIVGPYELQDFFLYYFLRYGFR 584 (678)
T ss_pred -----CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf -----66778874635578757789999999972898