HHsearch alignment for GI: 254780234 and conserved domain: PRK08557
>PRK08557 hypothetical protein; Provisional.
Probab=98.17 E-value=8.7e-05 Score=54.66 Aligned_cols=143 Identities=15% Similarity=0.123 Sum_probs=83.3
Q ss_pred EEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCC
Q ss_conf 899991477259999999987189869999945787--110689999999739807998200899999879999736865
Q gi|254780234|r 7 KVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANAL 84 (404)
Q Consensus 7 kVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~ 84 (404)
T Consensus 185 pV~VSfSGGKDS~a~L~La~-~a~~~~~vvF~DTGlEfPeT~eyve~~~~~~~~-~l~~~~~-~~fw~~~~~~---GpP~ 258 (420)
T PRK08557 185 AINASFSGGKDSAVSTLLSK-EVIPDLDVVFIDTGLEYPETLNYVKDFAKKYDI-NLDTVDG-DNFWDNLEKE---GIPT 258 (420)
T ss_pred CEEEEECCCHHHHHHHHHHH-HHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC-CEEEECC-HHHHHHHHHC---CCCC
T ss_conf 46996068789999999999-854881699962887772389999999998099-6799654-6689887754---9997
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHC--CCC-EEECHHHCCCCHHHHHHHHHHHH------C---CCCEEEEEECCCCC
Q ss_conf 478742013012433599999998856--892-87500111682156799999985------8---79707744100687
Q gi|254780234|r 85 YEGYYLLGTAIARPLIAKYLVDIANET--GAD-AIAHGSTGKGNDQVRFELSAYSL------N---SDIEIIAPWRHWSF 152 (404)
Q Consensus 85 Yeg~Ypl~tslaRplia~~lv~~a~~~--ga~-~iaHG~TgkGNDQvRFe~~~~~l------~---P~l~viaP~Rd~~~ 152 (404)
T Consensus 259 rd--~RWCc~v---~Kl~Pl~~~i~~~~~~~~vl~~~G-------~R~~ES~~R~~~~~~~~~~~v~~q~~~~PI~~Wsa 326 (420)
T PRK08557 259 KD--NRWCNSA---CKLMPLKRYLKKKYGNKKVLTIDG-------SRKYESFTRANLDYERKSGFIDFQTNVFPILDWNS 326 (420)
T ss_pred CC--CCCCCCC---HHHHHHHHHHHHHCCCCCEEEEEE-------ECHHHHHHHHCCCCCCCCCCCCCCEEEEHHHCCCH
T ss_conf 66--7250743---101789999998578987599997-------01454076605874134777666503531532607
Q ss_pred CCHHHHHHHHHHHCCCCC
Q ss_conf 637999999997089675
Q gi|254780234|r 153 KGRQDLIDFAEKHAIPID 170 (404)
Q Consensus 153 ~sRe~~i~ya~~~gIpv~ 170 (404)
T Consensus 327 ---~~VwLYI~~~~l~~N 341 (420)
T PRK08557 327 ---LDIWSYIFSNDILYN 341 (420)
T ss_pred ---HHHHHHHHHCCCCCC
T ss_conf ---699999997599998