HHsearch alignment for GI: 254780234 and conserved domain: PRK09431
>PRK09431 asnB asparagine synthetase B; Provisional.
Probab=98.05 E-value=7.3e-05 Score=55.18 Aligned_cols=113 Identities=20% Similarity=0.229 Sum_probs=70.7
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCC-------------CEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHH-HHHH
Q ss_conf 7899991477259999999987189-------------8699999457871106899999997398079982008-9999
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKG-------------LEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLR-REFV 71 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g-------------~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r-~ef~ 71 (404)
T Consensus 228 vpvG~~LSGGLDSSlIaala~k~~~~~~~~~~~~~~~~~~l~tFsiG~~~s~D~~~Ar~vA~~lgt~-h~ei~~t~~d~~ 306 (555)
T PRK09431 228 VPYGVLLSGGLDSSLISAIAKKYAARRIEDDERSEAWWPQLHSFAVGLEGSPDLKAAREVADYLGTV-HHEIHFTVQEGL 306 (555)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC-CEEEEECHHHHH
T ss_conf 8624320577067999999998520244332222234678753660479981499999999982995-659995479999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHH
Q ss_conf 987999973686547874201301243359999999885689287500111682156
Q gi|254780234|r 72 RDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQV 128 (404)
Q Consensus 72 ~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQv 128 (404)
T Consensus 307 -~~l~~vi~~lE~~d~-~~~~asip~yl----lsk~i~~~gvKVvLS---GeGADEL 354 (555)
T PRK09431 307 -DALRDVIYHLETYDV-TTIRASTPMYL----MSRKIKAMGIKMVLS---GEGADEL 354 (555)
T ss_pred -HHHHHHHHHHHCCCC-CCHHHHHHHHH----HHHHHHHCCCEEEEE---CCCHHHH
T ss_conf -999999987414687-50256899999----999999639879992---7750441