HHsearch alignment for GI: 254780234 and conserved domain: TIGR02039
>TIGR02039 CysD sulfate adenylyltransferase, small subunit; InterPro: IPR011784 Metabolic assimilation of sulphur from inorganic sulphate, requires sulphate activation by coupling to a nucleoside, for the production of high-energy nucleoside phosphosulphates. This pathway appears to be similar in all prokaryotic organisms. Activation is first achieved through reaction of sulphate with ATP by sulphate adenylyltransferase (ATP sulphurylase) to produce 5'-phosphosulphate (APS), coupled by GTP hydrolysis. Subsequently, APS is phosphorylated by an APS kinase to produce 3'-phosphoadenosine-5'-phosphosulphate (PAPS). In Escherichia coli, ATP sulphurylase is a heterodimer composed of two subunits encoded by cysD and cysN, with APS kinase encoded by cysC. These genes are located in a unidirectionally transcribed gene cluster, and have been shown to be required for the synthesis of sulphur-containing amino acids. Homologous to this E. coli activation pathway are nodPQH gene products found among members of the Rhizobiaceae family. These gene products have been shown to exhibit ATP sulphurase and APS kinase activity, yet are involved in Nod factor sulphation, and sulphation of other macromolecules.; GO: 0004781 sulfate adenylyltransferase (ATP) activity, 0019421 sulfate reduction APS pathway.
Probab=94.88 E-value=0.21 Score=30.34 Aligned_cols=241 Identities=19% Similarity=0.223 Sum_probs=145.9
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHC--C-CEEEEEEEECCCC-CHHHHHHHHH-HHCCCEEEEEECHHHHHHHHHHHHHH
Q ss_conf 7789999147725999999998718--9-8699999457871-1068999999-97398079982008999998799997
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEK--G-LEVIVFIADLGQG-EELKIASDKA-RLLGAKEVYVKDLRREFVRDFVFPMF 79 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~--g-~eVi~~~~d~Gq~-~d~~~~~~~A-~~~Ga~~~~v~D~r~ef~~~~i~~~I 79 (404)
T Consensus 19 F~~PV~LyS~GKDS~VlLHLA~KaF~Pg~~PFplLHvDTgw~f~E~~~fRD~~~~~~~~-~L~v~~~~~~-~~~g~~P~~ 96 (295)
T TIGR02039 19 FERPVLLYSIGKDSSVLLHLARKAFYPGRLPFPLLHVDTGWKFREMIAFRDELVAKYGL-ELIVHSNEEG-IAEGINPFT 96 (295)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC-EEEEEECHHH-HHHCCCCCH
T ss_conf 37976898657347999998764058888797357740663278999999999987097-6888505023-541566201
Q ss_pred HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHH---------------------HHHHHHHHHC
Q ss_conf 3686547874201301243359999999885689287500111682156---------------------7999999858
Q gi|254780234|r 80 RANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQV---------------------RFELSAYSLN 138 (404)
Q Consensus 80 ~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQv---------------------RFe~~~~~l~ 138 (404)
T Consensus 97 ~~~~~~~----------~~~~T~~L~~Al~~~~FDAa~gGAR-RdEE~sRaKERifS~R~~~h~WDPk~QRPEL-W~~YN 164 (295)
T TIGR02039 97 EGSALHT----------DIMKTEALRQALDKNQFDAAFGGAR-RDEEKSRAKERIFSFRDAFHQWDPKKQRPEL-WNLYN 164 (295)
T ss_pred HHHHHHH----------HHHHHHHHHHHHHHCCCCEEECCCC-CHHHHCCCCCCEEHHCCCCCCCCCCCCCHHH-HHHCC
T ss_conf 0124555----------5563189999987338865631663-1344301201000100345788851257377-87505
Q ss_pred CCCEEEEEECCC---CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHH
Q ss_conf 797077441006---87637999999997089675665678864157243115457632458457682010014658122
Q gi|254780234|r 139 SDIEIIAPWRHW---SFKGRQDLIDFAEKHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVSPEE 215 (404)
Q Consensus 139 P~l~viaP~Rd~---~~~sRe~~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~p~~ 215 (404)
T Consensus 165 g~~~~GE~~RvFPLSNwT-E~DiW~Y~~~~~i~~~~l-----YfA~~RpV~~R~g~l~~~~D~~~~~~------------ 226 (295)
T TIGR02039 165 GRISKGESVRVFPLSNWT-ELDIWRYIAAENIEIVPL-----YFAAKRPVVERDGMLIMVDDERLELE------------ 226 (295)
T ss_pred CCCCCCCEEEEECCCCCC-HHHHHHHHHHCCCCCCEE-----ECCCCCCEEECCCEEEEECCCCCCCC------------
T ss_conf 234688726872266650-445898874346542201-----10246862410744888606524667------------
Q ss_pred CCCCCEEEEEEEECCEEEEECC----EECCHHHHHHHHH-HHHHHCCCCC-EECCCCCCCCCCCCCCC
Q ss_conf 7999638999995024787516----2318999999998-8864216374-10007732021000111
Q gi|254780234|r 216 APDTPTTIRIDFQRGDPIAING----QVMSPEVLLEQLN-QYGRCNGIGR-IDIVENRFVGIKSRGVY 277 (404)
Q Consensus 216 ap~~pe~v~I~Fe~G~PVainG----~~~~~~~li~~LN-~igg~~GvGr-~d~vEnr~vG~KsR~vY 277 (404)
T Consensus 227 ~~E~~~~~~vrfRTlGc~~~tga~~S~A~~~~~ii~E~~~~~~sERg~~R~~D~~~~~~ME~kKR~GY 294 (295)
T TIGR02039 227 PGEVVKERMVRFRTLGCYPLTGAIESDAATVEEIIAEVAVARTSERGQGRAIDRDQEASMEKKKREGY 294 (295)
T ss_pred CCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 77510000455554057564543122341079999998875320254523324412000233003679