HHsearch alignment for GI: 254780234 and conserved domain: TIGR03104

>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase. Members of this protein family are closely related to several isoforms of asparagine synthetase (glutamine amidotransferase) and typically have been given this name in genome annotation to date. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and a member of the GNAT family of acetyltransferases.
Probab=97.65  E-value=0.00065  Score=48.40  Aligned_cols=108  Identities=20%  Similarity=0.246  Sum_probs=69.2

Q ss_pred             EEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEC---CC--CCHHHHHHHHHHHCCCEEEEEECHH-HHHHHHHHHHHHH
Q ss_conf             8999914772599999999871898699999457---87--1106899999997398079982008-9999987999973
Q gi|254780234|r    7 KVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADL---GQ--GEELKIASDKARLLGAKEVYVKDLR-REFVRDFVFPMFR   80 (404)
Q Consensus         7 kVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~---Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r-~ef~~~~i~~~I~   80 (404)
T Consensus       262 pvg~~LSGGlDSS~i~a~~~~~~~~~i~tfs~~f~~~~~~~~dE~~~a~~va~~~~~~-h~~~~~~~~~~~-~~l~~~~~  339 (589)
T TIGR03104       262 PVGVLLSGGLDSSLIVGLLAEAGVDGLRTFSIGFEDVGGEKGDEFEYSDIIAERFHTR-HHKIRIPNHRVL-PALPEAVA  339 (589)
T ss_pred             CCCEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCC-CEEEEECCHHHH-HHHHHHHH
T ss_conf             6300017875438999999995699985278872468877666799999999973878-579995717899-98899885


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHH-HHHHHHHCCCCEEECHHHCCCCHHH
Q ss_conf             68654787420130124335999-9999885689287500111682156
Q gi|254780234|r   81 ANALYEGYYLLGTAIARPLIAKY-LVDIANETGADAIAHGSTGKGNDQV  128 (404)
Q Consensus        81 ana~Yeg~Ypl~tslaRplia~~-lv~~a~~~ga~~iaHG~TgkGNDQv  128 (404)
T Consensus       340 ~~---d--eP~~~~---~~~~~~~l~~~~~~-~~kV~Ls---G~GaDEl  376 (589)
T TIGR03104       340 AM---S--EPMVSH---DCVAFYLLSEEVSK-HVKVVQS---GQGADEV  376 (589)
T ss_pred             CC---C--CCCCCC---HHHHHHHHHHHHCC-CCEEEEE---EECCCCC
T ss_conf             26---8--987683---06889999987328-8369995---2033323