HHsearch alignment for GI: 254780234 and conserved domain: TIGR03108
>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1. The predicted protein-sorting transpeptidase that we call exosortase (see TIGR02602) has distinct subclasses that associated with different types of exopolysaccharide production loci. This model represents a distinct clade among a set of amidotransferases largely annotated (not necessarily accurately) as glutatime-hydrolyzing asparagine synthases. Members of this clade are essentially restricted to the characteristic exopolysaccharide (EPS) regions that contain the exosortase 1 genome (xrtA), in genomes that also have numbers of PEP-CTERM domain (TIGR02595) proteins.
Probab=97.73 E-value=0.00092 Score=47.30 Aligned_cols=108 Identities=16% Similarity=0.183 Sum_probs=70.0
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCC
Q ss_conf 7899991477259999999987189869999945787--11068999999973980799820089999987999973686
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANA 83 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana 83 (404)
T Consensus 259 VpvG~~LSGGlDSS~I~a~~~~~~~~~i~tfsi~f~~~~~DE~~~A~~vA~~~g~~-h~~~~~~~~~~-~~~~~~~~~-- 334 (628)
T TIGR03108 259 VPLGAFLSGGVDSSAVVALMAGLSDTPVNTCSIAFDDPAFDESAYARQVAERYGTN-HRVETVDPDDF-SLVDRLAGL-- 334 (628)
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC-CEEEECCHHHH-HHHHHHHHH--
T ss_conf 85687646886368999999984299864366534888754369999999860876-47997798999-879999998--
Q ss_pred CCCCCCCCCCCHHHHHHHH-HHHHHHHHCCCCEEECHHHCCCCHH
Q ss_conf 5478742013012433599-9999988568928750011168215
Q gi|254780234|r 84 LYEGYYLLGTAIARPLIAK-YLVDIANETGADAIAHGSTGKGNDQ 127 (404)
Q Consensus 84 ~Yeg~Ypl~tslaRplia~-~lv~~a~~~ga~~iaHG~TgkGNDQ 127 (404)
T Consensus 335 -~d--eP~~d~s---~i~~~~l~~~a~~-~vkV~Ls---G~GgDE 369 (628)
T TIGR03108 335 -YD--EPFADSS---ALPTYRVCELARK-RVTVALS---GDGGDE 369 (628)
T ss_pred -HC--CCCCCHH---HHHHHHHHHHHHC-CCEEEEE---CCCCCC
T ss_conf -46--8866678---9999999999864-9749996---677540