HHsearch alignment for GI: 254780234 and conserved domain: TIGR03183
>TIGR03183 DNA_S_dndC putative sulfurtransferase DndC. Members of this protein family are the DndC protein from the dnd (degradation during electrophoresis) operon. The dnd phenotype reflects a sulfur-containing modification to DNA. This operon is sparsely and sporadically distributed among bactera; among the first eight examples are members from the Actinobacteria, Firmicutes, Gammaproteobacteria, Cyanobacteria. DndC is suggested to be a sulfurtransferase.
Probab=97.49 E-value=0.0021 Score=44.69 Aligned_cols=145 Identities=19% Similarity=0.255 Sum_probs=94.7
Q ss_pred EEEEEECCCHHHHHHHHHH--------HHHCCCEEEEEEEECCCC---------CHHHHHHHHHHHCCC--EEEEEE-CH
Q ss_conf 8999914772599999999--------871898699999457871---------106899999997398--079982-00
Q gi|254780234|r 7 KVVLAYSGGLDTSIILKWL--------QVEKGLEVIVFIADLGQG---------EELKIASDKARLLGA--KEVYVK-DL 66 (404)
Q Consensus 7 kVvlaySGGLDTSv~i~~L--------~~e~g~eVi~~~~d~Gq~---------~d~~~~~~~A~~~Ga--~~~~v~-D~ 66 (404)
T Consensus 15 PWvIGySGGKDSTavLqLvw~Al~~Lp~e~r~K~v~VIssDTlVEnP~V~~~v~~~L~~i~~~a~~~~LPi~~~~~~P~~ 94 (447)
T TIGR03183 15 PWVIGYSGGKDSTAVLQLVWNALSELPPEQRTKKIHVISTDTLVENPIVAAWVNVSLERMQEAAQKQGLPIEPHRLTPAI 94 (447)
T ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 87997587739999999999999847887576888999799875577999999999999999999749982368933785
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH--------HHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHH----
Q ss_conf 89999987999973686547874201301243359--------999999885689287500111682156799999----
Q gi|254780234|r 67 RREFVRDFVFPMFRANALYEGYYLLGTAIARPLIA--------KYLVDIANETGADAIAHGSTGKGNDQVRFELSA---- 134 (404)
Q Consensus 67 r~ef~~~~i~~~I~ana~Yeg~Ypl~tslaRplia--------~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~---- 134 (404)
T Consensus 95 ~dtFWvnlI----------GrGYPaP~~~FRWCTdrLKI~P~~~fi~~~v~~~ge~ilvLG-tR~~ES~~Ra~~i~k~e~ 163 (447)
T TIGR03183 95 EDTFWVNLI----------GKGYPAPRQKFRWCTDRLKISPSNTFIRDKVAANGEVILVLG-TRKNESQARAAVMEKHEG 163 (447)
T ss_pred CCCHHHHHC----------CCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEE-CCHHHHHHHHHHHHHHHC
T ss_conf 443000103----------463079998765255766368289999986521496899995-652777999999998644
Q ss_pred ----HHHC-----CCCEEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf ----9858-----797077441006876379999999970
Q gi|254780234|r 135 ----YSLN-----SDIEIIAPWRHWSFKGRQDLIDFAEKH 165 (404)
Q Consensus 135 ----~~l~-----P~l~viaP~Rd~~~~sRe~~i~ya~~~ 165 (404)
T Consensus 164 ~~~~~~ls~h~~l~n~~vy~PI~dws~---ddVW~yL~~~ 200 (447)
T TIGR03183 164 GSTRDRLSRNSSLPNSWVYTPIEDWSN---DDVWMYLLQN 200 (447)
T ss_pred CCCHHHCCCCCCCCCCEEECCHHHCCH---HHHHHHHCCC
T ss_conf 670421276888888379730674764---0899986338