HHsearch alignment for GI: 254780234 and conserved domain: pfam06508
>pfam06508 ExsB ExsB. This family includes putative transcriptional regulators from Bacteria and Archaea.
Probab=99.05 E-value=1.9e-09 Score=88.12 Aligned_cols=111 Identities=31% Similarity=0.405 Sum_probs=75.3
Q ss_pred EEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCC--CHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCC-
Q ss_conf 8999914772599999999871898699999457871--1068999999973980799820089999987999973686-
Q gi|254780234|r 7 KVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQG--EELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANA- 83 (404)
Q Consensus 7 kVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~--~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana- 83 (404)
T Consensus 1 Kavvl~SGG~DSt~~l~~a~-~~~~~v~ait~dYGQ~~~~Ei~~A~~ia~~l~i-~h~vidl~--~l~~~~~saL~~~~~ 76 (137)
T pfam06508 1 KAVVLLSGGLDSTTCLAWAK-KEGYEVYALTFDYGQRHSKELECAKKIAKALGV-EHKIVDLD--FLKQIGGSALTDDSI 76 (137)
T ss_pred CEEEEECCCHHHHHHHHHHH-HCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCC-CCEEECCC--HHHHHCCCCCCCCCC
T ss_conf 98999178789999999999-869968999814788739999999999998299-75030330--244416552236885
Q ss_pred -----CCC-CCCCCCCCHHHHHHH-HHHHHHHHHCCCCEEECHHH
Q ss_conf -----547-874201301243359-99999988568928750011
Q gi|254780234|r 84 -----LYE-GYYLLGTAIARPLIA-KYLVDIANETGADAIAHGST 121 (404)
Q Consensus 84 -----~Ye-g~Ypl~tslaRplia-~~lv~~a~~~ga~~iaHG~T 121 (404)
T Consensus 77 ~vp~~~~~~~~~~~t~VP~RN~iflsiA~a~A~~~g~~~I~~G~~ 121 (137)
T pfam06508 77 EVPDSELESEEIPNTYVPGRNLIFLSIAASYAEAIGANDIFIGVN 121 (137)
T ss_pred CCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 556654345678776563654999999999999869997999565