HHsearch results for GI: 254780234 and protein with PDBid: 1ni5_A
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATP, ATPase, PP-type, PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=98.84 E-value=2.6e-07 Score=71.24 Aligned_cols=146 Identities=17% Similarity=0.262 Sum_probs=92.5
Q ss_pred CCEEEEEECCCHHHHHHHHHHHH----HCCCEEEEEEEECCC-C---CHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHH
Q ss_conf 77899991477259999999987----189869999945787-1---106899999997398079982008999998799
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQV----EKGLEVIVFIADLGQ-G---EELKIASDKARLLGAKEVYVKDLRREFVRDFVF 76 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~----e~g~eVi~~~~d~Gq-~---~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~ 76 (404)
.|||++|+|||.||.+++..|.. ..+++++++++|-|- + +|.+.+++-|.++|. ++++.+....
T Consensus 13 ~~~vlva~SGG~DS~~ll~~l~~~~~~~~~~~~~~~h~~h~~r~~s~~~~~~v~~~~~~~~i-~~~~~~~~~~------- 84 (433)
T 1ni5_A 13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQV-PLVVERVQLA------- 84 (433)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTC-CEEEECCCCC-------
T ss_pred CCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC-CEEEEEEECC-------
T ss_conf 98299998180999999999999897589981999998298895579999999999997599-7899999647-------
Q ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHC----CC-CEEEEEE----
Q ss_conf 99736865478742013012433599999998856892875001116821567999999858----79-7077441----
Q gi|254780234|r 77 PMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLN----SD-IEIIAPW---- 147 (404)
Q Consensus 77 ~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~----P~-l~viaP~---- 147 (404)
..+... -+.+|-. +...-.+...++++|+.|-+ .|||+- ..+..|. ++ +.-+.|.
T Consensus 85 --------~~~~~~--e~~aR~~--Ry~~~~~~~~~~~~i~~aHh--~dD~~E--t~l~~l~rg~~~~gl~~~~~~~~~~ 148 (433)
T 1ni5_A 85 --------QEGLGI--EAQARQA--RYQAFARTLLPGEVLVTAQH--LDDQCE--TFLLALKRGSGPAGLSAMAEVSEFA 148 (433)
T ss_dssp --------CSSSTT--TTHHHHH--HHHHHHHTCCTTEEEECCCC--HHHHHH--HHHHHHTTTCCTTGGGCCCSEEEET
T ss_pred --------CCCCCH--HHHHHHH--HHHHHHHHHCCCCEEEEEEE--CHHHHH--HHHHHHHCCCCCCCCCCCCCEECCC
T ss_conf --------888887--9999999--99987865416570322001--103899--9999872577643343432221157
Q ss_pred -----CC-CCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf -----00-68763799999999708967566567
Q gi|254780234|r 148 -----RH-WSFKGRQDLIDFAEKHAIPIDKNKRG 175 (404)
Q Consensus 148 -----Rd-~~~~sRe~~i~ya~~~gIpv~~~~~~ 175 (404)
|- .++ +|++..+||+++|||.-....+
T Consensus 149 ~~~i~RPlL~~-~k~ei~~y~~~~~i~~~eD~SN 181 (433)
T 1ni5_A 149 GTRLIRPLLAR-TRGELVQWARQYDLRWIEDESN 181 (433)
T ss_dssp TEEEECGGGSC-CHHHHHHHHHHTTCCCBCCCCG
T ss_pred CCEEEEECCCC-CHHHHHHHHHHCCCCCCCCCCC
T ss_conf 85088750018-6999999987467762036677