HHsearch results for GI: 254780234 and protein with PDBid: 2c5s_A
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=99.24 E-value=3.2e-11 Score=99.31 Aligned_cols=149 Identities=17% Similarity=0.190 Sum_probs=104.7
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCC---CHHHHHHHHHHHCCC----EEEEEECHHHHHHHHHHHHH
Q ss_conf 78999914772599999999871898699999457871---106899999997398----07998200899999879999
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQG---EELKIASDKARLLGA----KEVYVKDLRREFVRDFVFPM 78 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~---~d~~~~~~~A~~~Ga----~~~~v~D~r~ef~~~~i~~~ 78 (404)
.||++++|||+||+|++.++. +.|++|++++.+.|+. ++.+.+++-|..++. .+.++++..+.+ +... .
T Consensus 188 gKvlvllSGGiDS~Vaa~ll~-k~G~~v~~v~~~~~~~~~~~~~e~v~~la~~l~~~~~~i~~~~~~~~~~~-~~~~-~- 263 (413)
T 2c5s_A 188 GKVMVLLSGGIDSPVAAYLTM-KRGVSVEAVHFHSPPFTSERAKQKVIDLAQELTKYCKRVTLHLVPFTEVQ-KTIN-K- 263 (413)
T ss_dssp EEEEEECCSSSHHHHHHHHHH-HBTEEEEEEEEECTTTSCHHHHHHHHHHHHHHGGGSSCEEEEEEECHHHH-HHHH-H-
T ss_pred CCEEEEEECCCCHHHHHHHHH-HHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHH-HHHH-H-
T ss_conf 838999966960899999999-82886368997569989978999999999981897211244662277888-8777-5-
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHH-CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHH
Q ss_conf 7368654787420130124335999999988568928750011-168215679999998587970774410068763799
Q gi|254780234|r 79 FRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGST-GKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQD 157 (404)
Q Consensus 79 I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~T-gkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~ 157 (404)
+. ..+..+.+.|-+..+.+.++|++.||++|+.|-. +--.+|.-..+....-.-++.|+.|.. .+ ..+|
T Consensus 264 ---~~----~~~~~~~~~rr~~~~~a~~~A~~~g~~~I~tG~~~~d~~sq~l~nl~~~~~~~~~~iiRPL~--~~-dK~E 333 (413)
T 2c5s_A 264 ---EI----PSSYSMTVMRRMMMRITERIAEERNALAITTGESLGQVASQTLDSMHTINEVTNYPVIRPLI--TM-DKLE 333 (413)
T ss_dssp ---HS----CGGGHHHHHHHHHHHHHHHHHHHTTCCEEECCCCSSSTTSCCHHHHHHHGGGCCSCEECTTT--TC-CHHH
T ss_pred ---HC----CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC--CC-CHHH
T ss_conf ---44----68883226899999999999985578899987726866026788876514222676414001--69-9999
Q ss_pred HHHHHHHHCCC
Q ss_conf 99999970896
Q gi|254780234|r 158 LIDFAEKHAIP 168 (404)
Q Consensus 158 ~i~ya~~~gIp 168 (404)
-+++|++.|++
T Consensus 334 I~~~Ak~iGl~ 344 (413)
T 2c5s_A 334 IIKIAEEIGTY 344 (413)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHCCCC
T ss_conf 99999984991