HHsearch results for GI: 254780234 and protein with PDBid: 2d13_A
>2d13_A Hypothetical protein PH1257; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Pyrococcus horikoshii} SCOP: c.26.2.1 PDB: 3h7e_A* 1ru8_A
Probab=98.61 E-value=1.1e-06 Score=66.60 Aligned_cols=157 Identities=20% Similarity=0.259 Sum_probs=109.3
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEE-ECC-------CCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHH
Q ss_conf 77789999147725999999998718986999994-578-------7110689999999739807998200899999879
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIA-DLG-------QGEELKIASDKARLLGAKEVYVKDLRREFVRDFV 75 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~-d~G-------q~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i 75 (404)
.|.+|++.||||-||++++.++. ++|++|+++.. --. |....+-++..|..+|. +.+.+....
T Consensus 3 ~~~~v~vl~SGGKDS~lAl~~a~-~~G~~v~~L~t~~~~~~~s~~~h~~~~~ll~~qA~algi-PL~~~~~~~------- 73 (227)
T 2d13_A 3 GLADVAVLYSGGKDSNYALYWAL-KSGLRVRYLVSMVSENEESYMYHTPNVELTSLQARALGI-PIIKGFTKG------- 73 (227)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECCC---------CCTTHHHHHHHHTC-CEEEEEC---------
T ss_pred CCCCEEEECCCCHHHHHHHHHHH-HCCCEEEEEEEEECCCCCCEECCCCCHHHHHHHHHHCCC-CEEEEECCC-------
T ss_conf 86649999368699999999999-869927999997438888141557789999999997599-717874678-------
Q ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCH
Q ss_conf 99973686547874201301243359999999885689287500111682156799999985879707744100687637
Q gi|254780234|r 76 FPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGR 155 (404)
Q Consensus 76 ~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sR 155 (404)
.|+. -...+.+..++.+.++|++|.-..--..-|.|..+..+ .++.+.|. |+.. +
T Consensus 74 --------~~e~------------~~~~l~~~l~~~~v~~iv~Gdi~~~~~~~~~e~~~~~~--gl~~~~PL--W~~d-~ 128 (227)
T 2d13_A 74 --------EKEK------------EVEDLKNVLEGLKVDGIVAGALASRYQKERIENVAREL--GLKVYTPA--WEKD-P 128 (227)
T ss_dssp --------CTTS------------HHHHHHHHHHTBCCSEEECCCSSCHHHHHHHHHHHHHH--TCEEECTT--TTCC-H
T ss_pred --------CHHH------------HHHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHC--CCEEECCC--CCCC-H
T ss_conf --------6158------------99999999997175607862376288999999999874--98887332--4887-7
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 99999999708967566567886415724311545763245
Q gi|254780234|r 156 QDLIDFAEKHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLE 196 (404)
Q Consensus 156 e~~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Le 196 (404)
++.+.-+-+.|+.+-.... .++-.|+...|+.+.-..++
T Consensus 129 ~~ll~e~i~~G~~aiiv~v--~~~~L~~~~lGr~l~~~~~~ 167 (227)
T 2d13_A 129 YQYMLEIIKLGFKVVFVAV--SAYGLNESWLGRELNYKNLE 167 (227)
T ss_dssp HHHHHHHHHTTCEEEEEEE--CSTTCCGGGTTCBCCHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEE--CCCCCCHHHCCCCCCHHHHH
T ss_conf 9999999987990999997--45899968917733497899