HHsearch results for GI: 254780234 and protein with PDBid: 2e18_A

>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Pyrococcus horikoshii OT3}
Probab=98.64  E-value=3.9e-07  Score=69.97  Aligned_cols=149  Identities=21%  Similarity=0.235  Sum_probs=97.9

Q ss_pred             CCEEEEEECCCHHHHHHHHHHHHHCC-CEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCC
Q ss_conf             77899991477259999999987189-86999994578711068999999973980799820089999987999973686
Q gi|254780234|r    5 VKKVVLAYSGGLDTSIILKWLQVEKG-LEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANA   83 (404)
Q Consensus         5 ~kkVvlaySGGLDTSv~i~~L~~e~g-~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana   83 (404)
                      .++||+++|||+||||++.++.+--| ..|++++.+..+.++.++++..+..+|+ ++++++..+.|- .+. ..+..+.
T Consensus        22 ~~~vvvglSGGVDSav~A~La~~AlG~~~v~~v~~~~~~~~~~~~A~~~~~~lgi-~~~~i~i~~~~~-~~~-~~l~~~~   98 (257)
T 2e18_A           22 NNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFENKDVEDAKLVAEKLGI-GYKVINIKPIVD-SFV-ENLELNL   98 (257)
T ss_dssp             TTCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCSSCSTHHHHHHHHHHHHTC-EEEECCCHHHHH-HHH-HHHCSCC
T ss_pred             CCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC-CCCEEECCHHHH-HHH-HHHHHHH
T ss_conf             9978996887799999999999863864168851576530347999999986378-730243047899-999-9864556


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCC-CEEEEEECCCCCCCHHHHHHHH
Q ss_conf             547874201301243359999999885689287500111682156799999985879-7077441006876379999999
Q gi|254780234|r   84 LYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSD-IEIIAPWRHWSFKGRQDLIDFA  162 (404)
Q Consensus        84 ~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~-l~viaP~Rd~~~~sRe~~i~ya  162 (404)
                         ...-.+--.+|-- ...+...|...|+-++..|     |.-. ....+.+..-+ ...++|..+  +. ..+--+.+
T Consensus        99 ---~~~~~~ni~ar~r-~~~l~~~a~~~~~~vl~t~-----n~se-~~~g~~t~~gd~~~~~~Pl~d--L~-K~eVr~La  165 (257)
T 2e18_A           99 ---DRKGLGNIMSRTR-MIMLYAHANSLGRIVLGTS-----NRSE-FLTGYFTKWGDGASDYAPIIN--LY-KTEVWEIA  165 (257)
T ss_dssp             ---CHHHHHHHHHHHH-HHHHHHHHHHHTCEEECCC-----CHHH-HHHTCSCTTSTTCSSBCTTTT--SC-HHHHHHHH
T ss_pred             ---HHHHHHHHHHHHH-HHHHHHHHHHCCCEEECCC-----CCCH-HHEECCCCCCCCCCCCCCCCC--CC-HHHHHHHH
T ss_conf             ---6777887898886-8999999886397794478-----7342-320135556754577654568--84-99999999


Q ss_pred             HHHCCCC
Q ss_conf             9708967
Q gi|254780234|r  163 EKHAIPI  169 (404)
Q Consensus       163 ~~~gIpv  169 (404)
                      +.-|+|-
T Consensus       166 ~~Lglp~  172 (257)
T 2e18_A          166 KRIGVPE  172 (257)
T ss_dssp             HHHTCCH
T ss_pred             HHCCCCH
T ss_conf             9849996