HHsearch results for GI: 254780234 and protein with PDBid: 2e18_A
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Pyrococcus horikoshii OT3}
Probab=98.64 E-value=3.9e-07 Score=69.97 Aligned_cols=149 Identities=21% Similarity=0.235 Sum_probs=97.9
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCC-CEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCC
Q ss_conf 77899991477259999999987189-86999994578711068999999973980799820089999987999973686
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEKG-LEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANA 83 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~g-~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana 83 (404)
.++||+++|||+||||++.++.+--| ..|++++.+..+.++.++++..+..+|+ ++++++..+.|- .+. ..+..+.
T Consensus 22 ~~~vvvglSGGVDSav~A~La~~AlG~~~v~~v~~~~~~~~~~~~A~~~~~~lgi-~~~~i~i~~~~~-~~~-~~l~~~~ 98 (257)
T 2e18_A 22 NNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFENKDVEDAKLVAEKLGI-GYKVINIKPIVD-SFV-ENLELNL 98 (257)
T ss_dssp TTCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCSSCSTHHHHHHHHHHHHTC-EEEECCCHHHHH-HHH-HHHCSCC
T ss_pred CCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC-CCCEEECCHHHH-HHH-HHHHHHH
T ss_conf 9978996887799999999999863864168851576530347999999986378-730243047899-999-9864556
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCC-CEEEEEECCCCCCCHHHHHHHH
Q ss_conf 547874201301243359999999885689287500111682156799999985879-7077441006876379999999
Q gi|254780234|r 84 LYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSD-IEIIAPWRHWSFKGRQDLIDFA 162 (404)
Q Consensus 84 ~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~-l~viaP~Rd~~~~sRe~~i~ya 162 (404)
...-.+--.+|-- ...+...|...|+-++..| |.-. ....+.+..-+ ...++|..+ +. ..+--+.+
T Consensus 99 ---~~~~~~ni~ar~r-~~~l~~~a~~~~~~vl~t~-----n~se-~~~g~~t~~gd~~~~~~Pl~d--L~-K~eVr~La 165 (257)
T 2e18_A 99 ---DRKGLGNIMSRTR-MIMLYAHANSLGRIVLGTS-----NRSE-FLTGYFTKWGDGASDYAPIIN--LY-KTEVWEIA 165 (257)
T ss_dssp ---CHHHHHHHHHHHH-HHHHHHHHHHHTCEEECCC-----CHHH-HHHTCSCTTSTTCSSBCTTTT--SC-HHHHHHHH
T ss_pred ---HHHHHHHHHHHHH-HHHHHHHHHHCCCEEECCC-----CCCH-HHEECCCCCCCCCCCCCCCCC--CC-HHHHHHHH
T ss_conf ---6777887898886-8999999886397794478-----7342-320135556754577654568--84-99999999
Q ss_pred HHHCCCC
Q ss_conf 9708967
Q gi|254780234|r 163 EKHAIPI 169 (404)
Q Consensus 163 ~~~gIpv 169 (404)
+.-|+|-
T Consensus 166 ~~Lglp~ 172 (257)
T 2e18_A 166 KRIGVPE 172 (257)
T ss_dssp HHHTCCH
T ss_pred HHCCCCH
T ss_conf 9849996