HHsearch results for GI: 254780234 and protein with PDBid: 2nz2_A

>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, structural genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=100.00  E-value=0  Score=1153.29  Aligned_cols=398  Identities=48%  Similarity=0.855  Sum_probs=387.1

Q ss_pred             CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHH
Q ss_conf             98777789999147725999999998718986999994578711068999999973980799820089999987999973
Q gi|254780234|r    1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFR   80 (404)
Q Consensus         1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~   80 (404)
                      |+. ++|||||||||||||||++||+ ++|||||||++|+||++|++.+++||.++||++++++|+|+||+++||||+|+
T Consensus         2 m~~-k~kVvLAySGGLDTSv~l~wL~-e~g~eVia~~~d~Gq~~d~~~i~~kA~~~GA~~~~v~D~r~ef~~~~i~p~i~   79 (413)
T 2nz2_A            2 MSS-KGSVVLAYSGGLDTSCILVWLK-EQGYDVIAYLANIGQKEDFEEARKKALKLGAKKVFIEDVSREFVEEFIWPAIQ   79 (413)
T ss_dssp             ----CEEEEEECCSSHHHHHHHHHHH-HTTEEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHH
T ss_pred             CCC-CCEEEEEECCCCHHHHHHHHHH-HCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf             987-8879999089827999999999-74986999999699878889999999983998899971799999999999997


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC----CCHH
Q ss_conf             686547874201301243359999999885689287500111682156799999985879707744100687----6379
Q gi|254780234|r   81 ANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSF----KGRQ  156 (404)
Q Consensus        81 ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~----~sRe  156 (404)
                      |||+|||+|||+|||+||+||+++|++|+++||++||||||||||||||||+++++|+|+++||||||||+|    .||+
T Consensus        80 ana~yeg~Y~l~tslaRplia~~~v~~A~~~ga~~vaHG~TGkGNDQvRFe~~~~aL~P~~~viaP~Rd~~~~~~~~sR~  159 (413)
T 2nz2_A           80 SSALYEDRYLLGTSLARPCIARKQVEIAQREGAKYVSHGATGKGNDQVRFELSCYSLAPQIKVIAPWRMPEFYNRFKGRN  159 (413)
T ss_dssp             TTCCBTTTBCCTTTTHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHCTTCEEECGGGCHHHHTTCC-CH
T ss_pred             HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHH
T ss_conf             36455887312455218799999999999839979835877686368889999998699970256331256665307899


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCEEEEEEEECCEEEEEC
Q ss_conf             99999997089675665678864157243115457632458457682010014658122799963899999502478751
Q gi|254780234|r  157 DLIDFAEKHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVSPEEAPDTPTTIRIDFQRGDPIAIN  236 (404)
Q Consensus       157 ~~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~p~~ap~~pe~v~I~Fe~G~PVain  236 (404)
                      ++|+||++||||++.+++  +|||+|+||||+|+|||+|||||+++|+++|.||++|+++||+|++|+|+|++|+||+||
T Consensus       160 e~i~y~~~~gi~v~~~~~--~~yS~D~Nlwg~s~Egg~ledp~~~~p~~~~~~t~~p~~ap~~pe~v~I~F~~G~pV~in  237 (413)
T 2nz2_A          160 DLMEYAKQHGIPIPVTPK--NPWSMDENLMHISYEAGILENPKNQAPPGLYTKTQDPAKAPNTPDILEIEFKKGVPVKVT  237 (413)
T ss_dssp             HHHHHHHHTTCCCCSSCC--CSSCEEECSSCEEECSGGGGSTTSCCCGGGCCSSCCTTTSCSSCEEEEEEEETTEEEEEE
T ss_pred             HHHHHHHHCCCCCCCCCC--CCCEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCEEEEEE
T ss_conf             999999985999876678--775145331010223464237654577214025466121999985899874052579984


Q ss_pred             C-----EECCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf             6-----23189999999988864216374100077320210001113737899999999998650899999999999999
Q gi|254780234|r  237 G-----QVMSPEVLLEQLNQYGRCNGIGRIDIVENRFVGIKSRGVYETPGGTILLHAHRAIESISLDSGSAHLKDDLMSR  311 (404)
Q Consensus       237 G-----~~~~~~~li~~LN~igg~~GvGr~d~vEnr~vG~KsR~vYEaPga~iL~~Ahr~LE~~~l~~~~~~~K~~~~~~  311 (404)
                      |     +.++|++||++||+|||+|||||+||||||+|||||||||||||++||+.|||+||++||||+++++|++++++
T Consensus       238 g~~~g~~~~~~~eli~~LN~i~g~~GIGR~d~vEnrivG~KsR~vyEaPg~tiL~~AHr~LE~~~Ldr~~~~~K~~l~~~  317 (413)
T 2nz2_A          238 NVKDGTTHQTSLELFMYLNEVAGKHGVGRIDIVENRFIGMKSRGIYETPAGTILYHAHLDIEAFTMDREVRKIKQGLGLK  317 (413)
T ss_dssp             ETTTCCEECSHHHHHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEEECHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHCCCEECCCEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             67787456899999999988611343343003454002542464024817889999999998742859999999999999


Q ss_pred             HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf             99987535146989999999999972336739999990615999877278310883222301577878887854788870
Q gi|254780234|r  312 YASIVYQGFWFSPEREMLQALIDKSQEYVEGSITLKLYKGNVMVVGRESNKSLYSDKLVTFEDDLDAYNQSDSEGFIKLH  391 (404)
Q Consensus       312 ~a~lvy~G~wf~p~~~~l~a~i~~~q~~VtG~V~l~L~kG~~~v~gr~S~~sLy~~~~as~~~~~~~~~~~da~GFi~i~  391 (404)
                      |++|||+|+||||+|++|++||+++|++|||+|+|+|||||++++||+||+|||++++|||+++ +.|+|+||+|||+|+
T Consensus       318 ~a~lvy~G~wf~P~~~~l~afi~~~q~~VtG~V~l~L~kGn~~~~g~~S~~sLy~~~~as~~~~-~~~~~~da~GFI~l~  396 (413)
T 2nz2_A          318 FAELVYTGFWHSPECEFVRHCIAKSQERVEGKVQVSVLKGQVYILGRESPLSLYNEELVSMNVQ-GDYEPTDATGFININ  396 (413)
T ss_dssp             HHHHHHHTCSSSHHHHHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEECTTCCCCHHHHC-CCC-CSCCHHHHHHHHHHH
T ss_pred             HHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHC
T ss_conf             9999744647888999999999997293079999999899189998678610158501646479-982968811669865


Q ss_pred             CHHHHHHHHCCC
Q ss_conf             334898884178
Q gi|254780234|r  392 ALRLRTLARRNK  403 (404)
Q Consensus       392 ~l~~~~~~~~~k  403 (404)
                      ||++|+|+++++
T Consensus       397 ~l~~k~~~~~~~  408 (413)
T 2nz2_A          397 SLRLKEYHRLQS  408 (413)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHH
T ss_conf             786899999875