HHsearch results for GI: 254780234 and protein with PDBid: 2nz2_A
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, structural genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=100.00 E-value=0 Score=1153.29 Aligned_cols=398 Identities=48% Similarity=0.855 Sum_probs=387.1
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 98777789999147725999999998718986999994578711068999999973980799820089999987999973
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFR 80 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ 80 (404)
|+. ++|||||||||||||||++||+ ++|||||||++|+||++|++.+++||.++||++++++|+|+||+++||||+|+
T Consensus 2 m~~-k~kVvLAySGGLDTSv~l~wL~-e~g~eVia~~~d~Gq~~d~~~i~~kA~~~GA~~~~v~D~r~ef~~~~i~p~i~ 79 (413)
T 2nz2_A 2 MSS-KGSVVLAYSGGLDTSCILVWLK-EQGYDVIAYLANIGQKEDFEEARKKALKLGAKKVFIEDVSREFVEEFIWPAIQ 79 (413)
T ss_dssp ----CEEEEEECCSSHHHHHHHHHHH-HTTEEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHH
T ss_pred CCC-CCEEEEEECCCCHHHHHHHHHH-HCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf 987-8879999089827999999999-74986999999699878889999999983998899971799999999999997
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC----CCHH
Q ss_conf 686547874201301243359999999885689287500111682156799999985879707744100687----6379
Q gi|254780234|r 81 ANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSF----KGRQ 156 (404)
Q Consensus 81 ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~----~sRe 156 (404)
|||+|||+|||+|||+||+||+++|++|+++||++||||||||||||||||+++++|+|+++||||||||+| .||+
T Consensus 80 ana~yeg~Y~l~tslaRplia~~~v~~A~~~ga~~vaHG~TGkGNDQvRFe~~~~aL~P~~~viaP~Rd~~~~~~~~sR~ 159 (413)
T 2nz2_A 80 SSALYEDRYLLGTSLARPCIARKQVEIAQREGAKYVSHGATGKGNDQVRFELSCYSLAPQIKVIAPWRMPEFYNRFKGRN 159 (413)
T ss_dssp TTCCBTTTBCCTTTTHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHCTTCEEECGGGCHHHHTTCC-CH
T ss_pred HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHH
T ss_conf 36455887312455218799999999999839979835877686368889999998699970256331256665307899
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCEEEEEEEECCEEEEEC
Q ss_conf 99999997089675665678864157243115457632458457682010014658122799963899999502478751
Q gi|254780234|r 157 DLIDFAEKHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVSPEEAPDTPTTIRIDFQRGDPIAIN 236 (404)
Q Consensus 157 ~~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~p~~ap~~pe~v~I~Fe~G~PVain 236 (404)
++|+||++||||++.+++ +|||+|+||||+|+|||+|||||+++|+++|.||++|+++||+|++|+|+|++|+||+||
T Consensus 160 e~i~y~~~~gi~v~~~~~--~~yS~D~Nlwg~s~Egg~ledp~~~~p~~~~~~t~~p~~ap~~pe~v~I~F~~G~pV~in 237 (413)
T 2nz2_A 160 DLMEYAKQHGIPIPVTPK--NPWSMDENLMHISYEAGILENPKNQAPPGLYTKTQDPAKAPNTPDILEIEFKKGVPVKVT 237 (413)
T ss_dssp HHHHHHHHTTCCCCSSCC--CSSCEEECSSCEEECSGGGGSTTSCCCGGGCCSSCCTTTSCSSCEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHCCCCCCCCCC--CCCEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCEEEEEE
T ss_conf 999999985999876678--775145331010223464237654577214025466121999985899874052579984
Q ss_pred C-----EECCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 6-----23189999999988864216374100077320210001113737899999999998650899999999999999
Q gi|254780234|r 237 G-----QVMSPEVLLEQLNQYGRCNGIGRIDIVENRFVGIKSRGVYETPGGTILLHAHRAIESISLDSGSAHLKDDLMSR 311 (404)
Q Consensus 237 G-----~~~~~~~li~~LN~igg~~GvGr~d~vEnr~vG~KsR~vYEaPga~iL~~Ahr~LE~~~l~~~~~~~K~~~~~~ 311 (404)
| +.++|++||++||+|||+|||||+||||||+|||||||||||||++||+.|||+||++||||+++++|++++++
T Consensus 238 g~~~g~~~~~~~eli~~LN~i~g~~GIGR~d~vEnrivG~KsR~vyEaPg~tiL~~AHr~LE~~~Ldr~~~~~K~~l~~~ 317 (413)
T 2nz2_A 238 NVKDGTTHQTSLELFMYLNEVAGKHGVGRIDIVENRFIGMKSRGIYETPAGTILYHAHLDIEAFTMDREVRKIKQGLGLK 317 (413)
T ss_dssp ETTTCCEECSHHHHHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEEECHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCEECCCEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 67787456899999999988611343343003454002542464024817889999999998742859999999999999
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 99987535146989999999999972336739999990615999877278310883222301577878887854788870
Q gi|254780234|r 312 YASIVYQGFWFSPEREMLQALIDKSQEYVEGSITLKLYKGNVMVVGRESNKSLYSDKLVTFEDDLDAYNQSDSEGFIKLH 391 (404)
Q Consensus 312 ~a~lvy~G~wf~p~~~~l~a~i~~~q~~VtG~V~l~L~kG~~~v~gr~S~~sLy~~~~as~~~~~~~~~~~da~GFi~i~ 391 (404)
|++|||+|+||||+|++|++||+++|++|||+|+|+|||||++++||+||+|||++++|||+++ +.|+|+||+|||+|+
T Consensus 318 ~a~lvy~G~wf~P~~~~l~afi~~~q~~VtG~V~l~L~kGn~~~~g~~S~~sLy~~~~as~~~~-~~~~~~da~GFI~l~ 396 (413)
T 2nz2_A 318 FAELVYTGFWHSPECEFVRHCIAKSQERVEGKVQVSVLKGQVYILGRESPLSLYNEELVSMNVQ-GDYEPTDATGFININ 396 (413)
T ss_dssp HHHHHHHTCSSSHHHHHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEECTTCCCCHHHHC-CCC-CSCCHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHC
T ss_conf 9999744647888999999999997293079999999899189998678610158501646479-982968811669865
Q ss_pred CHHHHHHHHCCC
Q ss_conf 334898884178
Q gi|254780234|r 392 ALRLRTLARRNK 403 (404)
Q Consensus 392 ~l~~~~~~~~~k 403 (404)
||++|+|+++++
T Consensus 397 ~l~~k~~~~~~~ 408 (413)
T 2nz2_A 397 SLRLKEYHRLQS 408 (413)
T ss_dssp HHHHHHHHHTTC
T ss_pred CHHHHHHHHHHH
T ss_conf 786899999875