HHsearch results for GI: 254780234 and protein with PDBid: 3bl5_A
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=98.92 E-value=3.7e-08 Score=77.27 Aligned_cols=159 Identities=19% Similarity=0.217 Sum_probs=93.0
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCC--HHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHH
Q ss_conf 98777789999147725999999998718986999994578711--0689999999739807998200899999879999
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGE--ELKIASDKARLLGAKEVYVKDLRREFVRDFVFPM 78 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~--d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~ 78 (404)
|.+ ||+|+.|||||||++++.||+ +.|++|+++++|.||.. +.......+..+... +...+.... ......+.
T Consensus 1 m~k--~k~vvl~SGGlDS~~~a~~l~-~~g~~v~~l~~~ygq~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~ 75 (219)
T 3bl5_A 1 MKK--EKAIVVFSGGQDSTTCLLWAL-KEFEEVETVTFHYNQRHSQEVEVAKSIAEKLGVK-NHLLDMSLL-NQLAPNAL 75 (219)
T ss_dssp --C--CEEEEECCSSHHHHHHHHHHH-HHCSEEEEEEEESSCTTCHHHHHHHHHHHTTCCC-EEEEECGGG-GGGSTGGG
T ss_pred CCC--CEEEEEECCCHHHHHHHHHHH-HCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHH-CCCCHHHHH-HHHCCCCC
T ss_conf 997--739999588188999999999-8799699999988864210457789999985200-011103344-44202421
Q ss_pred HHC---CCCCCCCCCCCCCHHHHHHH-HHHHHHHHHCCCCEEECHH------HCCCCHHHHHHH---HH-HHHCCCCEEE
Q ss_conf 736---86547874201301243359-9999998856892875001------116821567999---99-9858797077
Q gi|254780234|r 79 FRA---NALYEGYYLLGTAIARPLIA-KYLVDIANETGADAIAHGS------TGKGNDQVRFEL---SA-YSLNSDIEII 144 (404)
Q Consensus 79 I~a---na~Yeg~Ypl~tslaRplia-~~lv~~a~~~ga~~iaHG~------TgkGNDQvRFe~---~~-~~l~P~l~vi 144 (404)
... ........+...-..|..+. ....-+|...+++.+.-|- +...+.+..++. .+ .....++.++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 155 (219)
T 3bl5_A 76 TRNDIEIEVKDGELPSTFVPGRNLVFLSFASILAYQIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIH 155 (219)
T ss_dssp C--------------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCC----CCGGGSHHHHHHHHHHHHHHHTSCCEEE
T ss_pred CCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 11203544301455534786103677789999988603441574225666557899837899999999974445503897
Q ss_pred EEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 44100687637999999997089
Q gi|254780234|r 145 APWRHWSFKGRQDLIDFAEKHAI 167 (404)
Q Consensus 145 aP~Rd~~~~sRe~~i~ya~~~gI 167 (404)
+|++. + +-.+.+..+.+.|.
T Consensus 156 ~P~~~--~-~K~eii~~~~~~~~ 175 (219)
T 3bl5_A 156 TPLMW--L-NKAETWKLADELGA 175 (219)
T ss_dssp CTTTT--C-CHHHHHHHHHHTTC
T ss_pred CCCCC--C-CHHHHHHHHHHCCC
T ss_conf 24003--7-29999999998289