HHsearch results for GI: 254780234 and protein with PDBid: 3k32_A

>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=99.44  E-value=3.1e-12  Score=106.56  Aligned_cols=146  Identities=23%  Similarity=0.290  Sum_probs=102.7

Q ss_pred             CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCC
Q ss_conf             77789999147725999999998718986999994578711068999999973980799820089999987999973686
Q gi|254780234|r    4 DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANA   83 (404)
Q Consensus         4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana   83 (404)
                      ++.||++|||||+|||+++.+++ +.|++|+++++|.|+.++.+.+++.|..+|. +++++++.+++.++.+..+++++ 
T Consensus         5 k~~kv~V~~SGG~DS~~la~ll~-~~g~~v~~v~~~~~~~~~~~~a~~~a~~lgi-~~~~~~~~~~~~~~~~~~~~~~~-   81 (203)
T 3k32_A            5 KLMDVHVLFSGGKDSSLSAVILK-KLGYNPHLITINFGVIPSYKLAEETAKILGF-KHKVITLDRKIVEKAADMIIEHK-   81 (203)
T ss_dssp             -CEEEEEECCCSHHHHHHHHHHH-HTTEEEEEEEEECSSSCTTHHHHHHHHHHTC-EEEEEECCTHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEEECCCHHHHHHHHHHH-HCCCCEEEEEEECCCCHHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHHHCC-
T ss_conf             33708999558789999999999-7199769999879951478999999999699-71898578999988999998469-


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHH--HHHHHHHC--CCCEEEEEECCCCCCCHHHHH
Q ss_conf             54787420130124335999999988568928750011168215679--99999858--797077441006876379999
Q gi|254780234|r   84 LYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRF--ELSAYSLN--SDIEIIAPWRHWSFKGRQDLI  159 (404)
Q Consensus        84 ~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRF--e~~~~~l~--P~l~viaP~Rd~~~~sRe~~i  159 (404)
                           +|...  .|.+ -...+ .+.+.|+++|++|-+  .+||+..  -.-.+.+.  .+..++.|.-  ++ ++++..
T Consensus        82 -----~~~~~--~~~~-~~~~~-~~~a~~~~~i~tGh~--~dD~~e~~~~~~~~~~~~~~~~~~~rPL~--~~-~k~ei~  147 (203)
T 3k32_A           82 -----YPGPA--IQYV-HKTVL-EILADEYSILADGTR--RDDRVPKLSYSEIQSLEMRKNIQYITPLM--GF-GYKTLR  147 (203)
T ss_dssp             -----SSHHH--HHHH-HHHHH-HHHTTTCSEEECCCC--TTCCSSCCCHHHHHHHHHHHTCEEECGGG--GC-CHHHHH
T ss_pred             -----CHHHH--HHHH-HHHHH-HHHHCCCCEEEECCC--CHHHHCCCHHHHHCCCCHHHHHHCCCCCC--CC-CHHHHH
T ss_conf             -----82499--9999-99999-999669999997288--07775412087714520221000025335--98-999999


Q ss_pred             HHHHHHC
Q ss_conf             9999708
Q gi|254780234|r  160 DFAEKHA  166 (404)
Q Consensus       160 ~ya~~~g  166 (404)
                      +||+++.
T Consensus       148 ~~a~~~~  154 (203)
T 3k32_A          148 HLASEFF  154 (203)
T ss_dssp             HHHHHHE
T ss_pred             HHHHHCC
T ss_conf             9999708