HHsearch results for GI: 254780234 and protein with PDBid: 3n05_A
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=97.19 E-value=0.0016 Score=44.01 Aligned_cols=144 Identities=17% Similarity=0.185 Sum_probs=85.3
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCC-EEEEEEEECC-C-CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 7778999914772599999999871898-6999994578-7-11068999999973980799820089999987999973
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGL-EVIVFIADLG-Q-GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFR 80 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~-eVi~~~~d~G-q-~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ 80 (404)
..++|||.-|||+||++++....+--|. .|+++++-.- + .+..+++++-|..+|. .+.+++..+-+ +.+. ..+.
T Consensus 325 g~~~~v~glSGGiDSal~a~la~~alg~~~v~~~~mP~~~ss~~t~~~a~~l~~~lg~-~~~~~~i~~~~-~~~~-~~~~ 401 (590)
T 3n05_A 325 GFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGL-NFRTVSIEPMF-DAYM-ASLG 401 (590)
T ss_dssp TCCCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCSSCCHHHHHHHHHHHHHHTC-EEEECCSHHHH-HHHH-HHHC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCC-CCCCEECHHHH-HHHH-HHCC
T ss_conf 9986999637993289999999985188651135468666740209999999997199-73214317999-9998-6213
Q ss_pred CC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCC-CEEEEEECCCCCCCHHHH
Q ss_conf 68-6547874201301243359999999885689287500111682156799999985879-707744100687637999
Q gi|254780234|r 81 AN-ALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSD-IEIIAPWRHWSFKGRQDL 158 (404)
Q Consensus 81 an-a~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~-l~viaP~Rd~~~~sRe~~ 158 (404)
.. ..+| +..|-.|- -.+..+|.+.|+=++..| |.-.-. +.+.++.-| ..-++|+-|..-+--.++
T Consensus 402 ~~~~~~e----N~qar~R~---~~l~~~a~~~~~lvl~t~-----n~sE~a-lG~~t~~gd~~~~~~p~~~l~Kt~v~~l 468 (590)
T 3n05_A 402 LTGLAEE----NLQSRLRG---TTLMAISNQEGHIVLAPG-----NKSELA-VGYSTLYGDSVGAYGPIKDVYKTSIFRL 468 (590)
T ss_dssp CCTHHHH----HHHHHHHH---HHHHHHHHHHTCEEBCCC-----CHHHHH-HTCCCSSCTTSCSBCTTTTSCHHHHHHH
T ss_pred CCCHHHH----HHHHHHHH---HHHHHHHHHCCCEEECCC-----CHHHHH-HCCCEECCCCCCCCEECCCCCHHHHHHH
T ss_conf 3413567----77887748---999998714693796378-----674676-3751113677632000378539999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780234|r 159 IDFAE 163 (404)
Q Consensus 159 i~ya~ 163 (404)
..|..
T Consensus 469 ~~~~~ 473 (590)
T 3n05_A 469 AEWRN 473 (590)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99985