HHsearch results for GI: 254780234 and protein with PDBid: 3n05_A

>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=97.19  E-value=0.0016  Score=44.01  Aligned_cols=144  Identities=17%  Similarity=0.185  Sum_probs=85.3

Q ss_pred             CCCEEEEEECCCHHHHHHHHHHHHHCCC-EEEEEEEECC-C-CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHH
Q ss_conf             7778999914772599999999871898-6999994578-7-11068999999973980799820089999987999973
Q gi|254780234|r    4 DVKKVVLAYSGGLDTSIILKWLQVEKGL-EVIVFIADLG-Q-GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFR   80 (404)
Q Consensus         4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~-eVi~~~~d~G-q-~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~   80 (404)
                      ..++|||.-|||+||++++....+--|. .|+++++-.- + .+..+++++-|..+|. .+.+++..+-+ +.+. ..+.
T Consensus       325 g~~~~v~glSGGiDSal~a~la~~alg~~~v~~~~mP~~~ss~~t~~~a~~l~~~lg~-~~~~~~i~~~~-~~~~-~~~~  401 (590)
T 3n05_A          325 GFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGL-NFRTVSIEPMF-DAYM-ASLG  401 (590)
T ss_dssp             TCCCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCSSCCHHHHHHHHHHHHHHTC-EEEECCSHHHH-HHHH-HHHC
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCC-CCCCEECHHHH-HHHH-HHCC
T ss_conf             9986999637993289999999985188651135468666740209999999997199-73214317999-9998-6213


Q ss_pred             CC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCC-CEEEEEECCCCCCCHHHH
Q ss_conf             68-6547874201301243359999999885689287500111682156799999985879-707744100687637999
Q gi|254780234|r   81 AN-ALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSD-IEIIAPWRHWSFKGRQDL  158 (404)
Q Consensus        81 an-a~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~-l~viaP~Rd~~~~sRe~~  158 (404)
                      .. ..+|    +..|-.|-   -.+..+|.+.|+=++..|     |.-.-. +.+.++.-| ..-++|+-|..-+--.++
T Consensus       402 ~~~~~~e----N~qar~R~---~~l~~~a~~~~~lvl~t~-----n~sE~a-lG~~t~~gd~~~~~~p~~~l~Kt~v~~l  468 (590)
T 3n05_A          402 LTGLAEE----NLQSRLRG---TTLMAISNQEGHIVLAPG-----NKSELA-VGYSTLYGDSVGAYGPIKDVYKTSIFRL  468 (590)
T ss_dssp             CCTHHHH----HHHHHHHH---HHHHHHHHHHTCEEBCCC-----CHHHHH-HTCCCSSCTTSCSBCTTTTSCHHHHHHH
T ss_pred             CCCHHHH----HHHHHHHH---HHHHHHHHHCCCEEECCC-----CHHHHH-HCCCEECCCCCCCCEECCCCCHHHHHHH
T ss_conf             3413567----77887748---999998714693796378-----674676-3751113677632000378539999999


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254780234|r  159 IDFAE  163 (404)
Q Consensus       159 i~ya~  163 (404)
                      ..|..
T Consensus       469 ~~~~~  473 (590)
T 3n05_A          469 AEWRN  473 (590)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             99985