Query gi|254780234|ref|YP_003064647.1| argininosuccinate synthase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 404
No_of_seqs 140 out of 1321
Neff 5.0
Searched_HMMs 23785
Date Mon May 23 22:50:19 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780234.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kor_A Argininosuccinate synth 100.0 0 0 1176.4 42.9 394 7-403 2-395 (400)
2 2nz2_A Argininosuccinate synth 100.0 0 0 1153.3 43.1 398 1-403 2-408 (413)
3 1vl2_A Argininosuccinate synth 100.0 0 0 1141.6 41.5 395 5-403 14-417 (421)
4 1k92_A Argininosuccinate synth 100.0 0 0 1075.6 41.4 393 4-400 9-416 (455)
5 2hma_A Probable tRNA (5-methyl 99.7 2.9E-17 1.2E-21 142.6 13.6 168 1-183 4-202 (376)
6 2der_A TRNA-specific 2-thiouri 99.7 2.9E-17 1.2E-21 142.6 11.6 168 1-183 13-210 (380)
7 3k32_A Uncharacterized protein 99.4 3.1E-12 1.3E-16 106.6 13.4 146 4-166 5-154 (203)
8 2c5s_A THII, probable thiamine 99.2 3.2E-11 1.3E-15 99.3 9.1 149 6-168 188-344 (413)
9 2pg3_A Queuosine biosynthesis 99.2 2.2E-09 9.4E-14 86.0 17.1 158 5-167 2-178 (232)
10 2dpl_A GMP synthetase, GMP syn 99.2 2.1E-10 9E-15 93.3 10.8 151 5-170 20-181 (308)
11 1wy5_A TILS, hypothetical UPF0 99.1 2.5E-09 1.1E-13 85.7 14.2 154 2-172 21-191 (317)
12 3bl5_A Queuosine biosynthesis 98.9 3.7E-08 1.6E-12 77.3 13.4 159 1-167 1-175 (219)
13 3a2k_A TRNA(Ile)-lysidine synt 98.9 5.5E-08 2.3E-12 76.0 14.1 153 1-172 14-189 (464)
14 1ni5_A Putative cell cycle pro 98.8 2.6E-07 1.1E-11 71.2 15.2 146 5-175 13-181 (433)
15 2vxo_A GMP synthase [glutamine 98.8 5.7E-08 2.4E-12 76.0 11.5 163 5-172 240-437 (697)
16 3p52_A NH(3)-dependent NAD(+) 98.8 1.1E-07 4.7E-12 73.8 11.8 148 4-168 25-175 (249)
17 1xng_A NH(3)-dependent NAD(+) 98.7 5.6E-08 2.4E-12 76.0 9.4 148 4-169 24-175 (268)
18 3fiu_A NH(3)-dependent NAD(+) 98.7 1.8E-07 7.6E-12 72.3 11.8 152 4-169 28-185 (249)
19 2e18_A NH(3)-dependent NAD(+) 98.6 3.9E-07 1.6E-11 70.0 11.2 149 5-169 22-172 (257)
20 1gpm_A GMP synthetase, XMP ami 98.6 6.9E-07 2.9E-11 68.2 12.4 150 5-171 227-397 (525)
21 2d13_A Hypothetical protein PH 98.6 1.1E-06 4.8E-11 66.6 12.7 157 4-196 3-167 (227)
22 3dpi_A NAD+ synthetase; ssgcid 98.5 6.1E-06 2.6E-10 61.4 14.8 153 4-169 45-212 (285)
23 2ywb_A GMP synthase [glutamine 98.5 9.7E-07 4.1E-11 67.1 10.1 148 5-170 209-374 (503)
24 2o8v_A Phosphoadenosine phosph 98.3 1.6E-06 6.7E-11 65.6 7.3 152 6-170 46-202 (252)
25 1ct9_A Asparagine synthetase B 98.2 2.5E-05 1E-09 57.0 12.0 113 6-128 227-353 (553)
26 1kqp_A NAD+ synthase;, NH(3)-d 98.2 1.7E-05 7.3E-10 58.1 11.2 154 4-171 37-202 (271)
27 1q15_A CARA; CMPR, (2S,5S)-5-c 98.2 2.2E-05 9.4E-10 57.3 11.0 112 6-128 239-350 (503)
28 1sur_A PAPS reductase; assimil 98.2 3.1E-06 1.3E-10 63.4 6.5 152 6-170 45-201 (215)
29 1jgt_A Beta-lactam synthetase; 98.2 1.1E-05 4.7E-10 59.5 9.3 111 6-128 242-353 (513)
30 1wxi_A NH(3)-dependent NAD(+) 98.1 3.7E-05 1.6E-09 55.7 11.4 154 5-172 40-206 (275)
31 1zun_A Sulfate adenylyltransfe 98.0 1.7E-05 7.3E-10 58.1 6.9 152 5-171 46-226 (325)
32 2goy_A Adenosine phosphosulfat 97.9 2.7E-05 1.1E-09 56.8 6.2 149 6-170 55-216 (275)
33 1vbk_A Hypothetical protein PH 97.7 0.0007 2.9E-08 46.6 11.2 127 6-167 180-307 (307)
34 3n05_A NH(3)-dependent NAD(+) 97.2 0.0016 6.8E-08 44.0 8.0 144 4-163 325-473 (590)
35 2oq2_A Phosphoadenosine phosph 97.1 0.00054 2.3E-08 47.4 4.7 149 6-170 42-207 (261)
36 2wsi_A FAD synthetase; transfe 97.0 0.015 6.3E-07 37.1 11.8 131 6-170 54-214 (306)
37 3dla_A Glutamine-dependent NAD 96.5 0.0056 2.3E-07 40.1 6.5 151 4-165 360-524 (680)
38 3fwk_A FMN adenylyltransferase 96.3 0.0002 8.4E-09 50.5 -2.2 29 139-170 189-217 (308)
39 1xw8_A UPF0271 protein YBGL; N 91.5 0.14 6E-06 30.0 3.6 147 102-260 87-242 (252)
40 3nbm_A PTS system, lactose-spe 91.1 0.85 3.6E-05 24.5 7.6 65 2-68 4-88 (108)
41 2dfa_A Hypothetical UPF0271 pr 88.8 0.44 1.9E-05 26.5 4.3 146 102-259 92-246 (250)
42 2l2q_A PTS system, cellobiose- 87.7 0.88 3.7E-05 24.3 5.2 61 7-68 6-86 (109)
43 3hbl_A Pyruvate carboxylase; T 87.5 1.1 4.8E-05 23.6 5.7 131 2-170 1-134 (1150)
44 1v6t_A Hypothetical UPF0271 pr 87.2 0.32 1.4E-05 27.5 2.7 148 102-261 92-248 (255)
45 1e2b_A Enzyme IIB-cellobiose; 87.1 0.92 3.9E-05 24.2 5.0 41 5-45 3-46 (106)
46 2vpq_A Acetyl-COA carboxylase; 85.8 1.8 7.8E-05 22.0 11.5 130 5-172 1-157 (451)
47 3ilv_A Glutamine-dependent NAD 84.9 2 8.5E-05 21.8 7.1 150 4-165 302-501 (634)
48 2pfs_A USP, universal stress p 84.5 2.1 8.8E-05 21.6 6.2 113 4-126 5-123 (150)
49 2dzd_A Pyruvate carboxylase; b 84.1 2.2 9.2E-05 21.5 7.2 36 1-38 1-37 (461)
50 3olq_A Universal stress protei 81.6 0.82 3.5E-05 24.6 2.8 108 1-125 4-124 (319)
51 1y81_A Conserved hypothetical 80.7 1.5 6.5E-05 22.6 3.9 115 2-130 11-134 (138)
52 2b69_A UDP-glucuronate decarbo 78.2 3.1 0.00013 20.4 4.8 36 1-37 23-58 (343)
53 1a9x_A Carbamoyl phosphate syn 76.5 3.8 0.00016 19.8 11.2 153 1-173 1-170 (1073)
54 1vhq_A Enhancing lycopene bios 75.8 4 0.00017 19.7 5.3 42 1-43 1-51 (232)
55 3lqk_A Dipicolinate synthase s 75.4 4 0.00017 19.7 4.7 41 1-42 3-47 (201)
56 2dgd_A 223AA long hypothetical 74.0 1.1 4.5E-05 23.8 1.5 97 130-255 99-197 (223)
57 3mcu_A Dipicolinate synthase, 73.9 4.4 0.00018 19.3 5.0 41 1-42 1-45 (207)
58 3mt0_A Uncharacterized protein 73.8 4.4 0.00019 19.3 8.1 94 2-125 4-102 (290)
59 3ouz_A Biotin carboxylase; str 73.6 4.5 0.00019 19.3 11.6 34 4-39 5-38 (446)
60 3nyw_A Putative oxidoreductase 73.5 3 0.00013 20.6 3.7 167 1-189 1-199 (250)
61 3hgm_A Universal stress protei 71.4 5 0.00021 18.9 9.2 109 6-127 3-125 (147)
62 2o8n_A APOA-I binding protein; 71.3 3.6 0.00015 20.0 3.7 44 15-59 92-135 (265)
63 1p3y_1 MRSD protein; flavoprot 69.9 5.4 0.00023 18.7 4.4 134 5-169 8-148 (194)
64 3ixl_A Amdase, arylmalonate de 69.9 5.4 0.00023 18.7 4.4 118 109-255 63-206 (240)
65 2x5e_A UPF0271 protein PA4511; 68.9 5.6 0.00024 18.6 4.3 95 102-200 98-200 (252)
66 3ff4_A Uncharacterized protein 63.4 3.5 0.00015 20.0 2.4 103 3-121 2-113 (122)
67 2ejb_A Probable aromatic acid 63.1 7.2 0.0003 17.8 5.5 37 5-42 1-40 (189)
68 1t2a_A GDP-mannose 4,6 dehydra 62.3 7.4 0.00031 17.7 5.4 114 4-121 22-156 (375)
69 3ixr_A Bacterioferritin comigr 62.0 7.5 0.00031 17.7 6.1 64 6-74 52-124 (179)
70 2q1w_A Putative nucleotide sug 61.8 7.5 0.00032 17.7 8.3 275 3-339 19-318 (333)
71 2jya_A AGR_C_3324P, uncharacte 61.7 2.6 0.00011 21.0 1.4 22 151-172 57-78 (106)
72 3l49_A ABC sugar (ribose) tran 61.7 7.6 0.00032 17.6 5.9 79 1-81 1-85 (291)
73 3m2t_A Probable dehydrogenase; 60.7 7.9 0.00033 17.5 9.9 125 1-137 1-137 (359)
74 1q77_A Hypothetical protein AQ 59.7 8.2 0.00034 17.4 7.8 113 2-126 1-123 (138)
75 3brs_A Periplasmic binding pro 59.0 8.4 0.00035 17.3 4.5 66 101-169 26-93 (289)
76 3dhn_A NAD-dependent epimerase 58.4 5.3 0.00022 18.8 2.6 36 1-39 1-37 (227)
77 2wm3_A NMRA-like family domain 58.3 8.6 0.00036 17.3 6.4 219 1-255 2-235 (299)
78 2c5a_A GDP-mannose-3', 5'-epim 56.9 9.1 0.00038 17.1 8.7 109 1-122 26-146 (379)
79 2hun_A 336AA long hypothetical 55.8 9.4 0.0004 17.0 4.3 159 1-172 1-176 (336)
80 1xgk_A Nitrogen metabolite rep 54.7 9.8 0.00041 16.8 11.5 217 1-256 1-239 (352)
81 1oc2_A DTDP-glucose 4,6-dehydr 54.3 9.9 0.00042 16.8 3.9 308 1-339 1-346 (348)
82 1tvm_A PTS system, galactitol- 53.9 10 0.00042 16.8 5.2 40 3-42 19-62 (113)
83 2pn1_A Carbamoylphosphate synt 51.3 11 0.00046 16.5 4.0 123 7-172 5-132 (331)
84 1gud_A ALBP, D-allose-binding 50.9 11 0.00047 16.4 5.1 30 115-144 137-168 (288)
85 1g63_A Epidermin modifying enz 50.6 11 0.00047 16.4 3.6 132 6-169 3-140 (181)
86 1ek6_A UDP-galactose 4-epimera 49.8 12 0.00049 16.3 8.9 113 1-122 1-133 (348)
87 3czc_A RMPB; alpha/beta sandwi 49.4 9.4 0.00039 17.0 2.6 37 4-41 17-59 (110)
88 3i6i_A Putative leucoanthocyan 49.4 12 0.0005 16.3 12.9 104 1-114 6-112 (346)
89 3h75_A Periplasmic sugar-bindi 49.1 12 0.0005 16.2 5.6 68 99-166 128-204 (350)
90 1n7h_A GDP-D-mannose-4,6-dehyd 48.7 12 0.00051 16.2 4.6 64 3-69 26-95 (381)
91 3ksm_A ABC-type sugar transpor 47.2 13 0.00053 16.0 6.4 67 100-170 18-88 (276)
92 1q8f_A Pyrimidine nucleoside h 46.2 13 0.00055 15.9 6.7 40 1-42 1-40 (313)
93 3dzb_A Prephenate dehydrogenas 46.1 13 0.00055 15.9 5.6 61 1-68 1-61 (317)
94 1vkr_A Mannitol-specific PTS s 46.0 11 0.00045 16.6 2.5 40 3-42 11-55 (125)
95 1iuk_A Hypothetical protein TT 45.6 8.8 0.00037 17.2 2.0 105 9-129 18-132 (140)
96 2vk2_A YTFQ, ABC transporter p 45.6 13 0.00056 15.9 6.6 48 117-165 134-186 (306)
97 3n6r_A Propionyl-COA carboxyla 45.3 14 0.00057 15.8 3.2 21 99-119 61-81 (681)
98 1f0k_A MURG, UDP-N-acetylgluco 44.9 14 0.00057 15.8 4.8 38 1-39 2-43 (364)
99 3ius_A Uncharacterized conserv 44.6 14 0.00058 15.8 4.6 103 3-122 2-104 (286)
100 8abp_A L-arabinose-binding pro 44.3 14 0.00059 15.7 5.7 158 5-165 2-193 (306)
101 3d3j_A Enhancer of mRNA-decapp 44.2 9.4 0.0004 17.0 2.0 17 350-366 269-285 (306)
102 1orr_A CDP-tyvelose-2-epimeras 44.2 14 0.00059 15.7 7.0 111 5-119 1-122 (347)
103 2c29_D Dihydroflavonol 4-reduc 43.5 13 0.00054 16.0 2.6 68 1-69 1-68 (337)
104 1y1p_A ARII, aldehyde reductas 43.3 14 0.00061 15.6 4.0 60 6-69 12-74 (342)
105 3ih5_A Electron transfer flavo 42.9 15 0.00062 15.6 5.1 47 17-67 23-69 (217)
106 1o97_C Electron transferring f 41.9 15 0.00064 15.5 10.2 98 22-145 46-147 (264)
107 3hn2_A 2-dehydropantoate 2-red 41.7 12 0.00051 16.2 2.2 31 1-36 1-31 (312)
108 1mjh_A Protein (ATP-binding do 40.6 16 0.00066 15.4 12.0 115 1-127 1-135 (162)
109 1dcf_A ETR1 protein; beta-alph 40.2 16 0.00067 15.3 6.6 28 7-35 9-36 (136)
110 1wv9_A Rhodanese homolog TT165 39.2 17 0.0007 15.2 3.9 13 157-169 68-80 (94)
111 3mz0_A Inositol 2-dehydrogenas 39.1 17 0.0007 15.2 11.1 116 7-130 4-135 (344)
112 1qzu_A Hypothetical protein MD 39.0 17 0.0007 15.2 4.6 39 3-41 17-58 (206)
113 2ax3_A Hypothetical protein TM 38.7 11 0.00048 16.4 1.7 100 6-117 53-157 (502)
114 2duw_A Putative COA-binding pr 38.6 8.4 0.00035 17.3 1.0 93 17-123 28-128 (145)
115 3fz0_A Nucleoside hydrolase, p 38.4 17 0.00072 15.1 6.3 40 1-42 4-43 (360)
116 2fn9_A Ribose ABC transporter, 37.6 18 0.00074 15.0 6.5 57 6-64 3-65 (290)
117 3e8x_A Putative NAD-dependent 37.2 18 0.00075 15.0 3.2 104 3-120 20-130 (236)
118 3e18_A Oxidoreductase; dehydro 36.9 18 0.00075 15.0 9.0 118 1-129 1-132 (359)
119 1geg_A Acetoin reductase; SDR 35.2 19 0.0008 14.8 6.4 60 5-69 1-63 (256)
120 3h7a_A Short chain dehydrogena 35.0 19 0.00081 14.8 9.1 57 8-69 11-68 (252)
121 2zcu_A Uncharacterized oxidore 34.8 19 0.00081 14.7 7.5 100 8-121 3-104 (286)
122 1gvf_A Tagatose-bisphosphate a 34.7 19 0.00081 14.7 3.0 121 21-173 9-135 (286)
123 3c1o_A Eugenol synthase; pheny 34.4 20 0.00082 14.7 6.9 64 3-69 2-68 (321)
124 3luf_A Two-component system re 34.3 20 0.00082 14.7 5.8 72 139-219 123-197 (259)
125 3jy6_A Transcriptional regulat 33.2 20 0.00086 14.6 5.4 156 3-166 5-180 (276)
126 1tjy_A Sugar transport protein 32.9 21 0.00087 14.5 6.0 14 102-115 23-36 (316)
127 1qyd_A Pinoresinol-lariciresin 32.8 21 0.00087 14.5 10.5 67 1-70 1-68 (313)
128 1li5_A Cysrs, cysteinyl-tRNA s 32.4 21 0.00088 14.5 6.6 148 19-200 48-199 (461)
129 2pfy_A Putative exported prote 31.4 22 0.00092 14.4 2.6 69 158-240 149-218 (301)
130 2fvy_A D-galactose-binding per 30.8 22 0.00094 14.3 4.6 28 117-144 146-176 (309)
131 3cg0_A Response regulator rece 30.7 22 0.00094 14.3 6.8 33 4-37 8-40 (140)
132 3dlo_A Universal stress protei 30.7 22 0.00094 14.3 10.3 102 5-124 24-129 (155)
133 3da8_A Probable 5'-phosphoribo 30.6 22 0.00094 14.3 7.8 58 1-66 8-68 (215)
134 3gv0_A Transcriptional regulat 30.6 22 0.00094 14.3 5.7 130 5-136 8-152 (288)
135 3l6u_A ABC-type sugar transpor 30.5 23 0.00095 14.3 6.6 160 4-165 7-193 (293)
136 2h0a_A TTHA0807, transcription 30.5 19 0.00079 14.8 1.7 89 27-118 26-119 (276)
137 1tlt_A Putative oxidoreductase 29.6 23 0.00098 14.1 8.8 123 1-138 1-135 (319)
138 2jug_A TUBC protein; docking d 29.5 18 0.00075 15.0 1.5 70 101-184 7-77 (78)
139 1sb8_A WBPP; epimerase, 4-epim 29.1 24 0.001 14.1 9.7 115 4-122 26-154 (352)
140 3fhl_A Putative oxidoreductase 29.1 24 0.001 14.1 5.0 120 1-129 1-132 (362)
141 3g1w_A Sugar ABC transporter; 28.5 24 0.001 14.0 6.2 162 1-166 1-186 (305)
142 3loq_A Universal stress protei 28.4 24 0.001 14.0 9.3 35 4-38 21-58 (294)
143 2dri_A D-ribose-binding protei 28.4 24 0.001 14.0 4.5 38 100-137 112-149 (271)
144 2yw2_A Phosphoribosylamine--gl 28.2 25 0.001 14.0 9.6 139 7-173 2-144 (424)
145 1efp_B ETF, protein (electron 28.2 25 0.001 14.0 7.7 104 22-152 46-152 (252)
146 3dg3_A Muconate cycloisomerase 27.8 25 0.001 13.9 8.4 37 126-164 171-207 (367)
147 1jtv_A 17 beta-hydroxysteroid 27.5 25 0.0011 13.9 6.2 62 6-69 2-69 (327)
148 3cea_A MYO-inositol 2-dehydrog 27.5 25 0.0011 13.9 11.1 120 1-129 2-139 (346)
149 3fdi_A Uncharacterized protein 27.3 25 0.0011 13.9 4.9 46 4-59 3-50 (201)
150 2c40_A Inosine-uridine preferr 27.2 25 0.0011 13.9 6.2 38 5-42 1-38 (312)
151 2pnf_A 3-oxoacyl-[acyl-carrier 27.2 25 0.0011 13.9 6.6 60 5-69 6-69 (248)
152 2d59_A Hypothetical protein PH 26.8 26 0.0011 13.8 3.0 101 9-123 27-135 (144)
153 2fq1_A Isochorismatase; ENTB, 26.6 26 0.0011 13.8 6.4 54 60-128 34-89 (287)
154 2qyt_A 2-dehydropantoate 2-red 26.4 26 0.0011 13.8 6.9 25 1-26 4-28 (317)
155 1z2n_X Inositol 1,3,4-trisphos 26.2 27 0.0011 13.7 3.8 63 111-174 55-118 (324)
156 3osu_A 3-oxoacyl-[acyl-carrier 26.2 27 0.0011 13.7 7.5 61 5-69 3-66 (246)
157 1edo_A Beta-keto acyl carrier 26.1 27 0.0011 13.7 6.4 58 8-69 3-63 (244)
158 1qyc_A Phenylcoumaran benzylic 25.8 27 0.0011 13.7 10.8 147 1-172 1-151 (308)
159 3kux_A Putative oxidoreductase 25.7 27 0.0011 13.7 7.9 116 1-130 4-135 (352)
160 1mvl_A PPC decarboxylase athal 25.6 27 0.0011 13.7 4.2 133 4-169 18-165 (209)
161 2p5y_A UDP-glucose 4-epimerase 25.1 28 0.0012 13.6 1.8 105 5-121 1-117 (311)
162 3kts_A Glycerol uptake operon 25.0 28 0.0012 13.6 4.9 74 102-189 44-119 (192)
163 2uvd_A 3-oxoacyl-(acyl-carrier 24.9 28 0.0012 13.6 7.5 65 1-69 1-66 (246)
164 2k0m_A Uncharacterized protein 24.6 28 0.0012 13.5 3.6 32 229-260 3-35 (104)
165 3gk5_A Uncharacterized rhodane 24.0 29 0.0012 13.5 4.2 32 135-169 50-82 (108)
166 1zem_A Xylitol dehydrogenase; 23.7 29 0.0012 13.4 6.9 64 1-69 1-68 (262)
167 3keb_A Probable thiol peroxida 23.6 29 0.0012 13.5 1.7 36 6-41 49-93 (224)
168 2b34_A F35G2.2, MAR1 ribonucle 23.5 30 0.0012 13.4 5.5 41 59-118 15-57 (199)
169 1zh8_A Oxidoreductase; TM0312, 23.5 30 0.0012 13.4 10.8 118 2-129 13-149 (340)
170 1r0k_A 1-deoxy-D-xylulose 5-ph 23.4 30 0.0012 13.4 5.6 62 1-67 1-63 (388)
171 3b50_A Sialic acid-binding per 23.4 30 0.0013 13.4 2.9 21 102-122 104-125 (310)
172 3is3_A 17BETA-hydroxysteroid d 23.2 30 0.0013 13.4 7.4 60 6-69 18-80 (270)
173 1a04_A Nitrate/nitrite respons 23.2 30 0.0013 13.4 4.4 17 151-167 198-214 (215)
174 2ixa_A Alpha-N-acetylgalactosa 23.0 30 0.0013 13.3 10.3 120 4-130 17-159 (444)
175 2dum_A Hypothetical protein PH 22.9 30 0.0013 13.3 5.9 120 5-130 5-135 (170)
176 2qkf_A 3-deoxy-D-manno-octulos 22.6 31 0.0013 13.3 2.2 16 157-172 120-135 (280)
177 3e82_A Putative oxidoreductase 22.6 31 0.0013 13.3 8.1 116 1-129 1-134 (364)
178 2zzv_A ABC transporter, solute 22.6 31 0.0013 13.3 2.6 44 292-335 303-347 (361)
179 1nvm_A HOA, 4-hydroxy-2-oxoval 22.4 31 0.0013 13.3 6.6 19 155-173 122-140 (345)
180 2eyq_A TRCF, transcription-rep 22.4 31 0.0013 13.3 2.9 13 155-167 141-153 (1151)
181 2nwq_A Probable short-chain de 22.4 31 0.0013 13.2 6.2 62 3-69 18-81 (272)
182 3gpi_A NAD-dependent epimerase 22.1 32 0.0013 13.2 4.5 34 1-38 1-34 (286)
183 2h3h_A Sugar ABC transporter, 22.0 32 0.0013 13.2 5.7 40 100-139 112-151 (313)
184 1k4i_A 3,4-dihydroxy-2-butanon 22.0 31 0.0013 13.3 1.5 41 130-170 158-211 (233)
185 1rpn_A GDP-mannose 4,6-dehydra 21.5 32 0.0014 13.1 8.4 114 6-122 15-139 (335)
186 2yzh_A Probable thiol peroxida 21.5 32 0.0014 13.1 4.9 18 6-23 48-65 (171)
187 2ehd_A Oxidoreductase, oxidore 21.4 32 0.0014 13.1 7.9 163 3-189 2-191 (234)
188 2vvr_A Ribose-5-phosphate isom 21.3 33 0.0014 13.1 5.8 110 5-129 1-118 (149)
189 2cfc_A 2-(R)-hydroxypropyl-COM 21.0 33 0.0014 13.1 6.0 60 5-69 1-64 (250)
190 2x4g_A Nucleoside-diphosphate- 20.9 33 0.0014 13.0 6.6 105 4-121 13-126 (342)
191 1efp_A ETF, protein (electron 20.5 34 0.0014 13.0 7.2 98 14-122 11-115 (307)
192 2bln_A Protein YFBG; transfera 20.4 34 0.0014 13.0 4.5 55 5-63 1-58 (305)
193 1vl8_A Gluconate 5-dehydrogena 20.3 34 0.0014 13.0 6.4 57 8-69 25-83 (267)
194 1h5q_A NADP-dependent mannitol 20.1 34 0.0014 12.9 7.5 60 6-69 14-76 (265)
195 3g17_A Similar to 2-dehydropan 20.1 35 0.0015 12.9 2.3 32 1-37 1-32 (294)
196 3brq_A HTH-type transcriptiona 20.0 35 0.0015 12.9 6.3 129 6-137 20-165 (296)
No 1
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=100.00 E-value=0 Score=1176.40 Aligned_cols=394 Identities=60% Similarity=1.016 Sum_probs=388.5
Q ss_pred EEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 89999147725999999998718986999994578711068999999973980799820089999987999973686547
Q gi|254780234|r 7 KVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANALYE 86 (404)
Q Consensus 7 kVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~Ye 86 (404)
|||||||||||||||++||+++||+|||||++|+||++|++.+++||.++||++++++|+|+||+++||||+|+|||+||
T Consensus 2 KVvLAySGGLDTSv~l~wL~e~~~~eVi~~~~d~Gq~~d~~~i~~kA~~~GA~~~~v~D~r~ef~~~~i~p~i~ana~Ye 81 (400)
T 1kor_A 2 KIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYE 81 (400)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHTCEEEEEEEESSCSSCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHHTTCCBT
T ss_pred EEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCC
T ss_conf 69999489817999999997405988999997088667669999999984998899975799999999999997386557
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 87420130124335999999988568928750011168215679999998587970774410068763799999999708
Q gi|254780234|r 87 GYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQDLIDFAEKHA 166 (404)
Q Consensus 87 g~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ya~~~g 166 (404)
|+|||+|||+|||||+++|++|+++||++||||||||||||||||+++++|+|+++||||||||+|.||+++|+||++||
T Consensus 82 ~~Y~l~tslaRplia~~~v~~A~~~ga~~iaHG~TGkGNDQvRFe~~~~al~P~l~iiaPwRd~~~~sR~~~i~ya~~~g 161 (400)
T 1kor_A 82 GYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHG 161 (400)
T ss_dssp TTBCCTTTTHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHCTTCEEECGGGTCCCCSHHHHHHHHHHTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHCCCCCHHHHHHHHHHCC
T ss_conf 87623454106479999999985449769943777578723668889997599974850101025366799999999849
Q ss_pred CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCEEEEEEEECCEEEEECCEECCHHHHH
Q ss_conf 96756656788641572431154576324584576820100146581227999638999995024787516231899999
Q gi|254780234|r 167 IPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVSPEEAPDTPTTIRIDFQRGDPIAINGQVMSPEVLL 246 (404)
Q Consensus 167 Ipv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~p~~ap~~pe~v~I~Fe~G~PVainG~~~~~~~li 246 (404)
||++++++ +|||+|+||||+|+|||+|||||++||+++|.||++|++|||+|++|+|+|++|+||+|||++++|++||
T Consensus 162 Ipv~~~~~--~~yS~D~NLwg~S~Egg~Ledp~~~~pe~~~~~t~~p~~apd~pe~v~I~Fe~G~Pv~ing~~~~~~eli 239 (400)
T 1kor_A 162 IPVPVTQE--KPYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAALL 239 (400)
T ss_dssp CCCC-------CCEEEECSSCEEEESGGGGCTTSCCCTTCCSSSCCGGGSCSSCEEEEEEEETTEEEEETTEECCHHHHH
T ss_pred CCCCCCCC--CCCCCCCCHHCEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEECCEEEEECCCCCCHHHHH
T ss_conf 99865678--8875465533022267664587766551213455796678998769876756566887678057899999
Q ss_pred HHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 99988864216374100077320210001113737899999999998650899999999999999999875351469899
Q gi|254780234|r 247 EQLNQYGRCNGIGRIDIVENRFVGIKSRGVYETPGGTILLHAHRAIESISLDSGSAHLKDDLMSRYASIVYQGFWFSPER 326 (404)
Q Consensus 247 ~~LN~igg~~GvGr~d~vEnr~vG~KsR~vYEaPga~iL~~Ahr~LE~~~l~~~~~~~K~~~~~~~a~lvy~G~wf~p~~ 326 (404)
++||+|||+|||||+||||||+|||||||||||||++||++|||+||++||||+++++|++++++|++|||+|+||||+|
T Consensus 240 ~~LN~i~g~~GIGr~d~vEnr~vG~KsR~vYEaPg~tiL~~AHr~LE~~tLdr~~~~~K~~l~~~~a~lvY~G~wfsP~r 319 (400)
T 1kor_A 240 QRLNEIGGRHGVGRVDIVENRFVGMKSRGVYETPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFWYAPER 319 (400)
T ss_dssp HHHHHHHHHTTCCEEEEEEECTTSCEEEEEEECHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHTCSSSHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 99998742312153230054202542354226827999999999999871779999999999999999985461678899
Q ss_pred HHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCC
Q ss_conf 99999999972336739999990615999877278310883222301577878887854788870334898884178
Q gi|254780234|r 327 EMLQALIDKSQEYVEGSITLKLYKGNVMVVGRESNKSLYSDKLVTFEDDLDAYNQSDSEGFIKLHALRLRTLARRNK 403 (404)
Q Consensus 327 ~~l~a~i~~~q~~VtG~V~l~L~kG~~~v~gr~S~~sLy~~~~as~~~~~~~~~~~da~GFi~i~~l~~~~~~~~~k 403 (404)
++|++||+++|++|||+|+|+|||||++++||+||+|||++++|||+++ +.|+|+||+|||+|++|++|++++++|
T Consensus 320 ~~l~afi~~tq~~VtG~V~lkLykG~~~v~gr~S~~sLY~~~~as~~~~-~~~~~~da~GFi~i~~l~~k~~a~~~~ 395 (400)
T 1kor_A 320 EALQAYFDHVARSVTGVARLKLYKGNVYVVGRKAPKSLYRQDLVSFDEA-GGYDQKDAEGFIKIQALRLRVRALVER 395 (400)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEECTTCCCC-----------CCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 9999999996395369999999788389998789620158623415689-997968807889974688999999864
No 2
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, structural genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=100.00 E-value=0 Score=1153.29 Aligned_cols=398 Identities=48% Similarity=0.855 Sum_probs=387.1
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 98777789999147725999999998718986999994578711068999999973980799820089999987999973
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFR 80 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ 80 (404)
|+. ++|||||||||||||||++||+ ++|||||||++|+||++|++.+++||.++||++++++|+|+||+++||||+|+
T Consensus 2 m~~-k~kVvLAySGGLDTSv~l~wL~-e~g~eVia~~~d~Gq~~d~~~i~~kA~~~GA~~~~v~D~r~ef~~~~i~p~i~ 79 (413)
T 2nz2_A 2 MSS-KGSVVLAYSGGLDTSCILVWLK-EQGYDVIAYLANIGQKEDFEEARKKALKLGAKKVFIEDVSREFVEEFIWPAIQ 79 (413)
T ss_dssp ----CEEEEEECCSSHHHHHHHHHHH-HTTEEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHH
T ss_pred CCC-CCEEEEEECCCCHHHHHHHHHH-HCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf 987-8879999089827999999999-74986999999699878889999999983998899971799999999999997
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC----CCHH
Q ss_conf 686547874201301243359999999885689287500111682156799999985879707744100687----6379
Q gi|254780234|r 81 ANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSF----KGRQ 156 (404)
Q Consensus 81 ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~----~sRe 156 (404)
|||+|||+|||+|||+||+||+++|++|+++||++||||||||||||||||+++++|+|+++||||||||+| .||+
T Consensus 80 ana~yeg~Y~l~tslaRplia~~~v~~A~~~ga~~vaHG~TGkGNDQvRFe~~~~aL~P~~~viaP~Rd~~~~~~~~sR~ 159 (413)
T 2nz2_A 80 SSALYEDRYLLGTSLARPCIARKQVEIAQREGAKYVSHGATGKGNDQVRFELSCYSLAPQIKVIAPWRMPEFYNRFKGRN 159 (413)
T ss_dssp TTCCBTTTBCCTTTTHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHCTTCEEECGGGCHHHHTTCC-CH
T ss_pred HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHH
T ss_conf 36455887312455218799999999999839979835877686368889999998699970256331256665307899
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCEEEEEEEECCEEEEEC
Q ss_conf 99999997089675665678864157243115457632458457682010014658122799963899999502478751
Q gi|254780234|r 157 DLIDFAEKHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVSPEEAPDTPTTIRIDFQRGDPIAIN 236 (404)
Q Consensus 157 ~~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~p~~ap~~pe~v~I~Fe~G~PVain 236 (404)
++|+||++||||++.+++ +|||+|+||||+|+|||+|||||+++|+++|.||++|+++||+|++|+|+|++|+||+||
T Consensus 160 e~i~y~~~~gi~v~~~~~--~~yS~D~Nlwg~s~Egg~ledp~~~~p~~~~~~t~~p~~ap~~pe~v~I~F~~G~pV~in 237 (413)
T 2nz2_A 160 DLMEYAKQHGIPIPVTPK--NPWSMDENLMHISYEAGILENPKNQAPPGLYTKTQDPAKAPNTPDILEIEFKKGVPVKVT 237 (413)
T ss_dssp HHHHHHHHTTCCCCSSCC--CSSCEEECSSCEEECSGGGGSTTSCCCGGGCCSSCCTTTSCSSCEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHCCCCCCCCCC--CCCEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCEEEEEE
T ss_conf 999999985999876678--775145331010223464237654577214025466121999985899874052579984
Q ss_pred C-----EECCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 6-----23189999999988864216374100077320210001113737899999999998650899999999999999
Q gi|254780234|r 237 G-----QVMSPEVLLEQLNQYGRCNGIGRIDIVENRFVGIKSRGVYETPGGTILLHAHRAIESISLDSGSAHLKDDLMSR 311 (404)
Q Consensus 237 G-----~~~~~~~li~~LN~igg~~GvGr~d~vEnr~vG~KsR~vYEaPga~iL~~Ahr~LE~~~l~~~~~~~K~~~~~~ 311 (404)
| +.++|++||++||+|||+|||||+||||||+|||||||||||||++||+.|||+||++||||+++++|++++++
T Consensus 238 g~~~g~~~~~~~eli~~LN~i~g~~GIGR~d~vEnrivG~KsR~vyEaPg~tiL~~AHr~LE~~~Ldr~~~~~K~~l~~~ 317 (413)
T 2nz2_A 238 NVKDGTTHQTSLELFMYLNEVAGKHGVGRIDIVENRFIGMKSRGIYETPAGTILYHAHLDIEAFTMDREVRKIKQGLGLK 317 (413)
T ss_dssp ETTTCCEECSHHHHHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEEECHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCEECCCEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 67787456899999999988611343343003454002542464024817889999999998742859999999999999
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 99987535146989999999999972336739999990615999877278310883222301577878887854788870
Q gi|254780234|r 312 YASIVYQGFWFSPEREMLQALIDKSQEYVEGSITLKLYKGNVMVVGRESNKSLYSDKLVTFEDDLDAYNQSDSEGFIKLH 391 (404)
Q Consensus 312 ~a~lvy~G~wf~p~~~~l~a~i~~~q~~VtG~V~l~L~kG~~~v~gr~S~~sLy~~~~as~~~~~~~~~~~da~GFi~i~ 391 (404)
|++|||+|+||||+|++|++||+++|++|||+|+|+|||||++++||+||+|||++++|||+++ +.|+|+||+|||+|+
T Consensus 318 ~a~lvy~G~wf~P~~~~l~afi~~~q~~VtG~V~l~L~kGn~~~~g~~S~~sLy~~~~as~~~~-~~~~~~da~GFI~l~ 396 (413)
T 2nz2_A 318 FAELVYTGFWHSPECEFVRHCIAKSQERVEGKVQVSVLKGQVYILGRESPLSLYNEELVSMNVQ-GDYEPTDATGFININ 396 (413)
T ss_dssp HHHHHHHTCSSSHHHHHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEECTTCCCCHHHHC-CCC-CSCCHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHC
T ss_conf 9999744647888999999999997293079999999899189998678610158501646479-982968811669865
Q ss_pred CHHHHHHHHCCC
Q ss_conf 334898884178
Q gi|254780234|r 392 ALRLRTLARRNK 403 (404)
Q Consensus 392 ~l~~~~~~~~~k 403 (404)
||++|+|+++++
T Consensus 397 ~l~~k~~~~~~~ 408 (413)
T 2nz2_A 397 SLRLKEYHRLQS 408 (413)
T ss_dssp HHHHHHHHHTTC
T ss_pred CHHHHHHHHHHH
T ss_conf 786899999875
No 3
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=100.00 E-value=0 Score=1141.58 Aligned_cols=395 Identities=52% Similarity=0.883 Sum_probs=385.4
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCC
Q ss_conf 77899991477259999999987189869999945787110689999999739807998200899999879999736865
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANAL 84 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~ 84 (404)
+||||||||||||||||++||+ |+||||||||+|+||++|++.+++||.++||++++++|+|+||+++||+|+|+|||+
T Consensus 14 k~KVvlAySGGLDTSv~l~~L~-e~g~eVi~~~~d~Gq~ed~~~~~~kA~~~GA~~~~v~D~r~ef~~~~i~p~I~ana~ 92 (421)
T 1vl2_A 14 KEKVVLAYSGGLDTSVILKWLC-EKGFDVIAYVANVGQKDDFVAIKEKALKTGASKVYVEDLRREFVTDYIFTALLGNAM 92 (421)
T ss_dssp CCEEEEECCSSHHHHHHHHHHH-HTTCEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHTTTCC
T ss_pred CCEEEEEECCCHHHHHHHHHHH-HCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCC
T ss_conf 3709999388748999999998-779979999997997677899999999849968999860999999999999966887
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC----CCHHHHHH
Q ss_conf 47874201301243359999999885689287500111682156799999985879707744100687----63799999
Q gi|254780234|r 85 YEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSF----KGRQDLID 160 (404)
Q Consensus 85 Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~----~sRe~~i~ 160 (404)
|||.|||+|||+|||||+++|++|+++||++||||||||||||||||+++++|+|+++||||||||+| .+|+++++
T Consensus 93 ye~~Y~l~tslaRplia~~~v~~A~~~ga~~iaHG~TGkGNDQvRFe~~~~aL~p~~~iiaP~R~~~~~~~~~~R~~~i~ 172 (421)
T 1vl2_A 93 YEGRYLLGTAIARPLIAKRQVEIAEKEGAQYVAHGATGKGNDQVRFELTYAALNPNLKVISPWKDPEFLAKFKGRTDLIN 172 (421)
T ss_dssp BTTTBCCHHHHHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHCTTSEEECGGGCHHHHHHTC--CHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHH
T ss_conf 67865342111158999999999997087488336524777541077779872897631585666656542011999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCEEEEEEEECCEEEEECC---
Q ss_conf 99970896756656788641572431154576324584576820100146581227999638999995024787516---
Q gi|254780234|r 161 FAEKHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVSPEEAPDTPTTIRIDFQRGDPIAING--- 237 (404)
Q Consensus 161 ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~p~~ap~~pe~v~I~Fe~G~PVainG--- 237 (404)
||++||||++++++ +|||+|+||||+|+|||+|||||++||+++|.||++|++||++|++|+|+|++|+||+|||
T Consensus 173 ya~~~gI~v~~~~~--~pyS~D~NLwg~S~Egg~Ledp~~~ppe~~~~~t~~p~~ap~~p~~v~I~Fe~G~PV~ing~~~ 250 (421)
T 1vl2_A 173 YAMEKGIPIKVSKK--RPYSEDENLMHISHEAGKLEDPAHIPDEDVFTWTVSPKDAPDEETLLEIHFENGIPVKVVNLKD 250 (421)
T ss_dssp HHHHHTCCCCSSCC--CSSEEEECSSCEEEESGGGGSTTSCCCGGGCCSSCCTTTSCSSCEEEEEEEETTEEEEEEETTT
T ss_pred HHHHCCCCCCCCCC--CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCEEEEEECCCC
T ss_conf 99975999731137--8863363620242245653445558982001356794359997732546886675589951678
Q ss_pred --EECCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf --231899999999888642163741000773202100011137378999999999986508999999999999999998
Q gi|254780234|r 238 --QVMSPEVLLEQLNQYGRCNGIGRIDIVENRFVGIKSRGVYETPGGTILLHAHRAIESISLDSGSAHLKDDLMSRYASI 315 (404)
Q Consensus 238 --~~~~~~~li~~LN~igg~~GvGr~d~vEnr~vG~KsR~vYEaPga~iL~~Ahr~LE~~~l~~~~~~~K~~~~~~~a~l 315 (404)
++++|++||++||+|||+|||||+||||||+|||||||||||||++||++|||+||++||||+++++|++++++|++|
T Consensus 251 ~~~~~~~~~li~~lN~i~g~~GiGR~d~vEnr~vG~KsR~vyEaPa~~iL~~AHr~LE~~~Ldr~~~~~K~~l~~~~a~l 330 (421)
T 1vl2_A 251 GTEKTDPLELFEYLNEVGAKNGVGRLDMVENRFIGIKSRGVYETPGATILWIAHRDLEGITMDKEVMHLRDMLAPKFAEL 330 (421)
T ss_dssp CCEECSHHHHHHHHHHHHHHTTCCEEEEEEECSSSSEEEEEEECHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCEECCEECCEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 74118999999999998555213751014640114010542368089999999999986407699999999999999999
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCHHH
Q ss_conf 75351469899999999999723367399999906159998772783108832223015778788878547888703348
Q gi|254780234|r 316 VYQGFWFSPEREMLQALIDKSQEYVEGSITLKLYKGNVMVVGRESNKSLYSDKLVTFEDDLDAYNQSDSEGFIKLHALRL 395 (404)
Q Consensus 316 vy~G~wf~p~~~~l~a~i~~~q~~VtG~V~l~L~kG~~~v~gr~S~~sLy~~~~as~~~~~~~~~~~da~GFi~i~~l~~ 395 (404)
||+|+||||+|++|++||+++|++|||+|+|+|||||++++||+||+|||++++|||+++ +.|+|+||+|||+|+||++
T Consensus 331 vY~G~wfsP~~~~l~afi~~sq~~VtG~V~lkLykG~~~v~gr~S~~sLy~~~~as~~~~-~~~~~~da~GFi~i~~l~~ 409 (421)
T 1vl2_A 331 IYNGFWFSPEMEFLLAAFRKAQENVTGKVTVSIYKGNVMPVARYSPYSLYNPELSSMDVE-GGFDATDSKGFINIHALRL 409 (421)
T ss_dssp HHHTCTTSHHHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEECSSSTTCC---------CCCCHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHCCHHH
T ss_conf 850345788999999999997596169999999898499998628720258623444579-9829788068899734999
Q ss_pred HHHHHCCC
Q ss_conf 98884178
Q gi|254780234|r 396 RTLARRNK 403 (404)
Q Consensus 396 ~~~~~~~k 403 (404)
|++++++|
T Consensus 410 k~~~~~~k 417 (421)
T 1vl2_A 410 KVHQLVKK 417 (421)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHC
T ss_conf 99999855
No 4
>1k92_A Argininosuccinate synthase, argininosuccinate; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=100.00 E-value=0 Score=1075.63 Aligned_cols=393 Identities=25% Similarity=0.423 Sum_probs=372.7
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCC--CHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHC
Q ss_conf 7778999914772599999999871898699999457871--10689999999739807998200899999879999736
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQG--EELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRA 81 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~--~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~a 81 (404)
..||||||||||||||||++||++ +|+|||||++|+||+ +|++.+++||+++||++++++|+|+||+++|+ |+|+|
T Consensus 9 ~gkKVvLAySGGLDTSv~l~wL~e-~g~eVia~~~DvGQ~~~ed~e~i~~kA~~~GA~~~~viD~r~eF~~~~i-~~i~a 86 (455)
T 1k92_A 9 VGQRIGIAFSGGLDTSAALLWMRQ-KGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGI-AAIQC 86 (455)
T ss_dssp TTSEEEEECCSSHHHHHHHHHHHH-TTCEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEECHHHHHHHHH-HHHHH
T ss_pred CCCEEEEEECCCCHHHHHHHHHHH-CCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHH-HHHHH
T ss_conf 898899994898289999999997-4986999999799985041799999999719978999718999999989-99985
Q ss_pred CCCCCC----CCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCC----CC
Q ss_conf 865478----7420130124335999999988568928750011168215679999998587970774410068----76
Q gi|254780234|r 82 NALYEG----YYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWS----FK 153 (404)
Q Consensus 82 na~Yeg----~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~----~~ 153 (404)
||+|++ .|||+|||+|||||+.+|++|+++||++||||||||||||||||+++++|+|+++||||||||+ |.
T Consensus 87 ~a~y~~~~~~~Y~l~tslaRplia~~~v~~A~~~ga~aiaHG~TGkGNDQvRFe~~~~al~P~l~viaPwRd~~~~~~~~ 166 (455)
T 1k92_A 87 GAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELG 166 (455)
T ss_dssp TCCCCEETTEECCCHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTSSHHHHHHHHHHHHCTTCEEECGGGCHHHHHHSS
T ss_pred CHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHH
T ss_conf 53554103566547652089889999999999829929954766676505657778974099863556845066787776
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC--CCHHHCCCCCCHHHCCCCCEEEEEEEECCE
Q ss_conf 379999999970896756656788641572431154576324584576--820100146581227999638999995024
Q gi|254780234|r 154 GRQDLIDFAEKHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDPSQP--APEYVYKMIVSPEEAPDTPTTIRIDFQRGD 231 (404)
Q Consensus 154 sRe~~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp~~~--~pe~~~~~t~~p~~ap~~pe~v~I~Fe~G~ 231 (404)
||+++++||++||||++.+++ +|||+|+||||+|+|||+||||+++ +|+++|.|+.+|+++|++|++|+|+|++|+
T Consensus 167 sR~~~i~ya~~~gIpv~~~~~--~~ySiD~NLwg~S~Egg~LEdp~~~~~~~~~~~~~~~~~~~~~~~pe~v~I~Fe~G~ 244 (455)
T 1k92_A 167 GRHEMSEFMIACGFDYKMSVE--KAYSTDSNMLGATHEAKDLEYLNSSVKIVNPIMGVKFWDESVKIPAEEVTVRFEQGH 244 (455)
T ss_dssp SHHHHHHHHHHTTCCCCCCCC--CSSEEEEETTEEEEESGGGGSTTCCGGGCCCSSSCCTTCTTSCCCCEEEEEEEETTE
T ss_pred HHHHHHHHHHHHCCCCCCCCC--CCCEECCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEE
T ss_conf 599999989971999887678--885023550025643477678442458888287543686568999846999987106
Q ss_pred EEEECCEECC-HHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 7875162318-999999998886421637410007732021000111373789999999999865089999999999999
Q gi|254780234|r 232 PIAINGQVMS-PEVLLEQLNQYGRCNGIGRIDIVENRFVGIKSRGVYETPGGTILLHAHRAIESISLDSGSAHLKDDLMS 310 (404)
Q Consensus 232 PVainG~~~~-~~~li~~LN~igg~~GvGr~d~vEnr~vG~KsR~vYEaPga~iL~~Ahr~LE~~~l~~~~~~~K~~~~~ 310 (404)
||+|||++++ |++||++||+|||+|||||+||||||+||||||||||||||+||++|||+||++||||+++++|+.+++
T Consensus 245 PVaiNGk~~~~~~eli~~LN~igG~hGIGR~d~vEnrivGiKsR~vYEaPgatiL~~Ahr~LE~~~l~~~~~~~k~~~~~ 324 (455)
T 1k92_A 245 PVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGR 324 (455)
T ss_dssp EEEETTBCCSSHHHHHHHHHHHHHTTTTTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 78537850585999999998875540535111016610230115201483899999999999984063999999999999
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHH-HHHHCCCCEEEEEEEECCE-EEEEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf 99998753514698999999999-9972336739999990615-999877278310883222301577878887854788
Q gi|254780234|r 311 RYASIVYQGFWFSPEREMLQALI-DKSQEYVEGSITLKLYKGN-VMVVGRESNKSLYSDKLVTFEDDLDAYNQSDSEGFI 388 (404)
Q Consensus 311 ~~a~lvy~G~wf~p~~~~l~a~i-~~~q~~VtG~V~l~L~kG~-~~v~gr~S~~sLy~~~~as~~~~~~~~~~~da~GFi 388 (404)
+|++|||+|+||||+|++|+.++ .++|++|||+|+|+||||| +.++||+||+|||+++++||++..+.|+|.||+|||
T Consensus 325 ~~a~lvY~G~wfsP~~~~l~~a~~~~~q~~VtG~V~lkL~kGn~~~v~gr~S~~sLy~~~~at~e~~~~~f~~~da~GFi 404 (455)
T 1k92_A 325 QLGRLLYQGRWFDSQALMLRDSLQRWVASQITGEVTLELRRGNDYSILNTVSENLTYKPERLTMEKGDSVFSPDDRIGQL 404 (455)
T ss_dssp HHHHHHHTTCTTSHHHHHHHHHHHHHTGGGCCEEEEEEECSTTCEEEEEEECTTCCCCTTTSCCSSCCCSSCHHHHHHHH
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEECCCCCCCCHHCEECCCCCCCCHHHHHHHH
T ss_conf 99999864617883599999999997348506999999808908999866897312681435112688870846635669
Q ss_pred HHCCHHHHHHHH
Q ss_conf 870334898884
Q gi|254780234|r 389 KLHALRLRTLAR 400 (404)
Q Consensus 389 ~i~~l~~~~~~~ 400 (404)
+|++||++...+
T Consensus 405 ~i~~L~l~~~r~ 416 (455)
T 1k92_A 405 TMRNLDITDTRE 416 (455)
T ss_dssp HTTHHHHHHHHH
T ss_pred HHCCCCCHHHHH
T ss_conf 873884848999
No 5
>2hma_A Probable tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=99.75 E-value=2.9e-17 Score=142.60 Aligned_cols=168 Identities=24% Similarity=0.342 Sum_probs=122.4
Q ss_pred CCC-CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC----------CCHHHHHHHHHHHCCCEEEEEECHHHH
Q ss_conf 987-777899991477259999999987189869999945787----------110689999999739807998200899
Q gi|254780234|r 1 MSR-DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ----------GEELKIASDKARLLGAKEVYVKDLRRE 69 (404)
Q Consensus 1 M~~-~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq----------~~d~~~~~~~A~~~Ga~~~~v~D~r~e 69 (404)
|+. +++||++|+|||+||||++.+|+ ++||||+++++.++. .+|+.++++.|..+|+ +++++|++++
T Consensus 4 m~~~~k~rV~v~mSGGVDSsvaA~LL~-~~G~~V~gv~m~~~~~~~~~~~c~~~~d~~da~~va~~LgI-p~~~~d~~~~ 81 (376)
T 2hma_A 4 MSDNSKTRVVVGMSGGVDSSVTALLLK-EQGYDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGI-PYYSVNFEKE 81 (376)
T ss_dssp -CCGGGSEEEEECCSSHHHHHHHHHHH-HTTCEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTC-CEEEEECHHH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHH-HCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC-CEEEECHHHH
T ss_conf 777876889999268799999999999-77995799999787787777877837889999999998599-8899650899
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHCCCCEEECHH--------HC---------CCCHHHHHH
Q ss_conf 99987999973686547874201301-2433599999998856892875001--------11---------682156799
Q gi|254780234|r 70 FVRDFVFPMFRANALYEGYYLLGTAI-ARPLIAKYLVDIANETGADAIAHGS--------TG---------KGNDQVRFE 131 (404)
Q Consensus 70 f~~~~i~~~I~ana~Yeg~Ypl~tsl-aRplia~~lv~~a~~~ga~~iaHG~--------Tg---------kGNDQvRFe 131 (404)
|.++.+-|.+.. .-.|+.|+-.-+ -|.+--..+++.|++.|++.||.|- +| ...||--|
T Consensus 82 f~~~V~~~f~~~--y~~G~TPNPcv~CN~~IKF~~l~~~a~~~g~d~iATGHYAri~~~~~g~~~L~r~~D~~KDQSYf- 158 (376)
T 2hma_A 82 YWDRVFEYFLAE--YRAGRTPNPDVMCNKEIKFKAFLDYAITLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYF- 158 (376)
T ss_dssp HHHHTHHHHHHH--HHTTCCCCHHHHHHHHTTTTHHHHHHHTTTCSEEECCCSEEEEECSSSCEEEEECSSTTTCCGGG-
T ss_pred HHHHHHHHHHHH--HHCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCEE-
T ss_conf 999998989999--86037999442112346699999999861566214673421367799868988516777774224-
Q ss_pred HHHHHHCCC--CEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
Q ss_conf 999985879--7077441006876379999999970896756656788641572
Q gi|254780234|r 132 LSAYSLNSD--IEIIAPWRHWSFKGRQDLIDFAEKHAIPIDKNKRGEAPFSIDT 183 (404)
Q Consensus 132 ~~~~~l~P~--l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~~~~~~~~~yS~D~ 183 (404)
...|.++ -+++=|.-+ ++ .+|--+.|+++|+|+.. +|=|.|-
T Consensus 159 --L~~l~~~~L~~~iFPLG~--~~-K~eVR~iA~~~gl~~a~-----K~dSq~I 202 (376)
T 2hma_A 159 --LSQLSQEQLQKTMFPLGH--LE-KPEVRRLAEEAGLSTAK-----KKDSTGI 202 (376)
T ss_dssp --GTTCCHHHHTTEECTTTT--CC-HHHHHHHHHHTTCTTTT-----CCCCCSC
T ss_pred --EEEECHHHHHCCCCCCCC--CC-HHHHHHHHHHCCCCCCC-----CCCCCCC
T ss_conf --443258788366688899--97-78999999875953267-----6455453
No 6
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=99.73 E-value=2.9e-17 Score=142.62 Aligned_cols=168 Identities=23% Similarity=0.296 Sum_probs=121.5
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCC----------CHHHHHHHHHHHCCCEEEEEECHHHHH
Q ss_conf 9877778999914772599999999871898699999457871----------106899999997398079982008999
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQG----------EELKIASDKARLLGAKEVYVKDLRREF 70 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~----------~d~~~~~~~A~~~Ga~~~~v~D~r~ef 70 (404)
|++.+|||++|+|||+||||++.+|+ ++||||+++++.++.. +|++++++.|..+|+ +++++|++++|
T Consensus 13 m~~~~kkV~V~mSGGVDSsvaa~lL~-~qG~~V~gv~m~~~~~~~~~~~c~~~~d~~~a~~va~~LgI-p~~~~d~~~~f 90 (380)
T 2der_A 13 MSETAKKVIVGMSGGVDSSVSAWLLQ-QQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI-ELHTVNFAAEY 90 (380)
T ss_dssp ----CCEEEEECCSCSTTHHHHHHHH-TTCCEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTC-CEEEEECHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHH-HCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC-CEEEECHHHHH
T ss_conf 77668879998778699999999999-77996899999887688766788846789999999998499-77994508976
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHH-HHHHHHHHH-HHHCCCCEEECH--H--------------HCCCCHHHHHHH
Q ss_conf 9987999973686547874201301243-359999999-885689287500--1--------------116821567999
Q gi|254780234|r 71 VRDFVFPMFRANALYEGYYLLGTAIARP-LIAKYLVDI-ANETGADAIAHG--S--------------TGKGNDQVRFEL 132 (404)
Q Consensus 71 ~~~~i~~~I~ana~Yeg~Ypl~tslaRp-lia~~lv~~-a~~~ga~~iaHG--~--------------TgkGNDQvRFe~ 132 (404)
.+..+-|.+.. .-.|..|+-+-.... +.-..+++. +++.||+.||.| + .-...||--|=
T Consensus 91 ~~~V~~~f~~~--y~~G~TPNPcv~CN~~iKf~~ll~~a~~~~g~d~iATGHYAr~~~~~~~~~L~r~~D~~KDQSYfL- 167 (380)
T 2der_A 91 WDNVFELFLAE--YKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFL- 167 (380)
T ss_dssp HHHTHHHHHHH--HHTTCCCCHHHHHHHHTTTTHHHHHHHHTTCCSEEECCCSCEEEEETTEEEEECCSSTTTCCGGGG-
T ss_pred HHHHHHHHHHH--HHCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCEEECCEEEEEECCCCCEEEEECCCCCCCCEEEE-
T ss_conf 22245777999--875899985401133322899999999866998560003799975899577885277777844676-
Q ss_pred HHHHHCCC--CEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
Q ss_conf 99985879--7077441006876379999999970896756656788641572
Q gi|254780234|r 133 SAYSLNSD--IEIIAPWRHWSFKGRQDLIDFAEKHAIPIDKNKRGEAPFSIDT 183 (404)
Q Consensus 133 ~~~~l~P~--l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~~~~~~~~~yS~D~ 183 (404)
..|.++ -+++-|.-+ ++ .+|--+.|+++|+|+.. ++-|.|-
T Consensus 168 --~~l~~~~L~~~~FPLG~--~~-K~eVR~iA~~~gl~~a~-----K~dSq~I 210 (380)
T 2der_A 168 --YTLSHEQIAQSLFPVGE--LE-KPQVRKIAEDLGLVTAK-----KKDSTGI 210 (380)
T ss_dssp --SSCCHHHHHHEECCGGG--SC-HHHHHHHHHHTTCC---------------
T ss_pred --EEECHHHHCCEEECCCC--CC-HHHHHHHHHHCCCCCCC-----CCCCCCC
T ss_conf --54357650554768978--85-57899999986997567-----5566674
No 7
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=99.44 E-value=3.1e-12 Score=106.56 Aligned_cols=146 Identities=23% Similarity=0.290 Sum_probs=102.7
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCC
Q ss_conf 77789999147725999999998718986999994578711068999999973980799820089999987999973686
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANA 83 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana 83 (404)
++.||++|||||+|||+++.+++ +.|++|+++++|.|+.++.+.+++.|..+|. +++++++.+++.++.+..+++++
T Consensus 5 k~~kv~V~~SGG~DS~~la~ll~-~~g~~v~~v~~~~~~~~~~~~a~~~a~~lgi-~~~~~~~~~~~~~~~~~~~~~~~- 81 (203)
T 3k32_A 5 KLMDVHVLFSGGKDSSLSAVILK-KLGYNPHLITINFGVIPSYKLAEETAKILGF-KHKVITLDRKIVEKAADMIIEHK- 81 (203)
T ss_dssp -CEEEEEECCCSHHHHHHHHHHH-HTTEEEEEEEEECSSSCTTHHHHHHHHHHTC-EEEEEECCTHHHHHHHHHHHHHS-
T ss_pred CCCEEEEEECCCHHHHHHHHHHH-HCCCCEEEEEEECCCCHHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHHHCC-
T ss_conf 33708999558789999999999-7199769999879951478999999999699-71898578999988999998469-
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHH--HHHHHHHC--CCCEEEEEECCCCCCCHHHHH
Q ss_conf 54787420130124335999999988568928750011168215679--99999858--797077441006876379999
Q gi|254780234|r 84 LYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRF--ELSAYSLN--SDIEIIAPWRHWSFKGRQDLI 159 (404)
Q Consensus 84 ~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRF--e~~~~~l~--P~l~viaP~Rd~~~~sRe~~i 159 (404)
+|... .|.+ -...+ .+.+.|+++|++|-+ .+||+.. -.-.+.+. .+..++.|.- ++ ++++..
T Consensus 82 -----~~~~~--~~~~-~~~~~-~~~a~~~~~i~tGh~--~dD~~e~~~~~~~~~~~~~~~~~~~rPL~--~~-~k~ei~ 147 (203)
T 3k32_A 82 -----YPGPA--IQYV-HKTVL-EILADEYSILADGTR--RDDRVPKLSYSEIQSLEMRKNIQYITPLM--GF-GYKTLR 147 (203)
T ss_dssp -----SSHHH--HHHH-HHHHH-HHHTTTCSEEECCCC--TTCCSSCCCHHHHHHHHHHHTCEEECGGG--GC-CHHHHH
T ss_pred -----CHHHH--HHHH-HHHHH-HHHHCCCCEEEECCC--CHHHHCCCHHHHHCCCCHHHHHHCCCCCC--CC-CHHHHH
T ss_conf -----82499--9999-99999-999669999997288--07775412087714520221000025335--98-999999
Q ss_pred HHHHHHC
Q ss_conf 9999708
Q gi|254780234|r 160 DFAEKHA 166 (404)
Q Consensus 160 ~ya~~~g 166 (404)
+||+++.
T Consensus 148 ~~a~~~~ 154 (203)
T 3k32_A 148 HLASEFF 154 (203)
T ss_dssp HHHHHHE
T ss_pred HHHHHCC
T ss_conf 9999708
No 8
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=99.24 E-value=3.2e-11 Score=99.31 Aligned_cols=149 Identities=17% Similarity=0.190 Sum_probs=104.7
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCC---CHHHHHHHHHHHCCC----EEEEEECHHHHHHHHHHHHH
Q ss_conf 78999914772599999999871898699999457871---106899999997398----07998200899999879999
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQG---EELKIASDKARLLGA----KEVYVKDLRREFVRDFVFPM 78 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~---~d~~~~~~~A~~~Ga----~~~~v~D~r~ef~~~~i~~~ 78 (404)
.||++++|||+||+|++.++. +.|++|++++.+.|+. ++.+.+++-|..++. .+.++++..+.+ +... .
T Consensus 188 gKvlvllSGGiDS~Vaa~ll~-k~G~~v~~v~~~~~~~~~~~~~e~v~~la~~l~~~~~~i~~~~~~~~~~~-~~~~-~- 263 (413)
T 2c5s_A 188 GKVMVLLSGGIDSPVAAYLTM-KRGVSVEAVHFHSPPFTSERAKQKVIDLAQELTKYCKRVTLHLVPFTEVQ-KTIN-K- 263 (413)
T ss_dssp EEEEEECCSSSHHHHHHHHHH-HBTEEEEEEEEECTTTSCHHHHHHHHHHHHHHGGGSSCEEEEEEECHHHH-HHHH-H-
T ss_pred CCEEEEEECCCCHHHHHHHHH-HHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHH-HHHH-H-
T ss_conf 838999966960899999999-82886368997569989978999999999981897211244662277888-8777-5-
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHH-CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHH
Q ss_conf 7368654787420130124335999999988568928750011-168215679999998587970774410068763799
Q gi|254780234|r 79 FRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGST-GKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQD 157 (404)
Q Consensus 79 I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~T-gkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~ 157 (404)
+. ..+..+.+.|-+..+.+.++|++.||++|+.|-. +--.+|.-..+....-.-++.|+.|.. .+ ..+|
T Consensus 264 ---~~----~~~~~~~~~rr~~~~~a~~~A~~~g~~~I~tG~~~~d~~sq~l~nl~~~~~~~~~~iiRPL~--~~-dK~E 333 (413)
T 2c5s_A 264 ---EI----PSSYSMTVMRRMMMRITERIAEERNALAITTGESLGQVASQTLDSMHTINEVTNYPVIRPLI--TM-DKLE 333 (413)
T ss_dssp ---HS----CGGGHHHHHHHHHHHHHHHHHHHTTCCEEECCCCSSSTTSCCHHHHHHHGGGCCSCEECTTT--TC-CHHH
T ss_pred ---HC----CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC--CC-CHHH
T ss_conf ---44----68883226899999999999985578899987726866026788876514222676414001--69-9999
Q ss_pred HHHHHHHHCCC
Q ss_conf 99999970896
Q gi|254780234|r 158 LIDFAEKHAIP 168 (404)
Q Consensus 158 ~i~ya~~~gIp 168 (404)
-+++|++.|++
T Consensus 334 I~~~Ak~iGl~ 344 (413)
T 2c5s_A 334 IIKIAEEIGTY 344 (413)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHCCCC
T ss_conf 99999984991
No 9
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=99.21 E-value=2.2e-09 Score=86.04 Aligned_cols=158 Identities=18% Similarity=0.185 Sum_probs=100.4
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCC--CHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCC
Q ss_conf 778999914772599999999871898699999457871--106899999997398079982008999998799997368
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQG--EELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRAN 82 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~--~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~an 82 (404)
|||+|++|||||||++++.||+ +.|++|++++.|.||. .|.+.....+..++...+.+.+. ..+...+-......+
T Consensus 2 mkk~VvL~SGGlDS~v~a~~l~-~~g~~v~~l~~~yGq~~~~e~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 79 (232)
T 2pg3_A 2 MKRAVVVFSGGQDSTTCLIQAL-QDYDDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLDV-GLLNELATSSLTRDS 79 (232)
T ss_dssp CCEEEEECCSSHHHHHHHHHHH-HHCSEEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEEC-THHHHTSHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCH-HHHHHCCCCCCCCCC
T ss_conf 9869998368089999999999-76996999999799832999999998665431012101204-555413565433444
Q ss_pred C-CCCCCC-----CCCCCHHHHHHH-HHHHHHHHHCCCCEEECHHHCCC------CHHH---HHHHHHH-HHCCCCEEEE
Q ss_conf 6-547874-----201301243359-99999988568928750011168------2156---7999999-8587970774
Q gi|254780234|r 83 A-LYEGYY-----LLGTAIARPLIA-KYLVDIANETGADAIAHGSTGKG------NDQV---RFELSAY-SLNSDIEIIA 145 (404)
Q Consensus 83 a-~Yeg~Y-----pl~tslaRplia-~~lv~~a~~~ga~~iaHG~TgkG------NDQv---RFe~~~~-~l~P~l~via 145 (404)
. .....+ +...-..|.++. .....+|...+++.++.|+..-. |.+. +++..+. ....+++|.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~r~~~~l~~a~~~a~~~~~~~~~~G~~~~d~~~~~d~~~~f~~~~~~~~~~~~~~~~~i~~ 159 (232)
T 2pg3_A 80 IPVPDYDANAQGIPNTFVPGRNILFLTLASIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFET 159 (232)
T ss_dssp CCCCC---------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCSCSSSCCGGGSHHHHHHHHHHHHHHHTSCCEEEC
T ss_pred CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 44432110023665235301308878999999998399753124446666677764486999999999855777726995
Q ss_pred EECCCCCCCHHHHHHHHHHHCC
Q ss_conf 4100687637999999997089
Q gi|254780234|r 146 PWRHWSFKGRQDLIDFAEKHAI 167 (404)
Q Consensus 146 P~Rd~~~~sRe~~i~ya~~~gI 167 (404)
|.. .+ +-.|.+..+++++.
T Consensus 160 P~~--~~-tK~Ei~~~~~~~~~ 178 (232)
T 2pg3_A 160 PLM--WL-NKAETWALADYYQQ 178 (232)
T ss_dssp TTT--TC-CHHHHHHHHHHTTC
T ss_pred ECC--CC-CHHHHHHHHHHHCC
T ss_conf 022--58-88999998543123
No 10
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii OT3} PDB: 2z0c_A 3a4i_A
Probab=99.18 E-value=2.1e-10 Score=93.33 Aligned_cols=151 Identities=17% Similarity=0.254 Sum_probs=98.5
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--CCHHHHH-HHHHHHCCCEEEEEECHHHHHHHHHHHHHHHC
Q ss_conf 77899991477259999999987189869999945787--1106899-99999739807998200899999879999736
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--GEELKIA-SDKARLLGAKEVYVKDLRREFVRDFVFPMFRA 81 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~~d~~~~-~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~a 81 (404)
.+||++|+|||.||||++..+++--|..|+|+++|-|- ..|.+.+ ...+..+|. +++++|..+.|...+ ..
T Consensus 20 ~~kVvvalSGGVDSsV~A~L~~kAlGd~v~aV~~d~g~~r~~E~~~~~~~~~~~~gi-~~~~vd~~~~~~~~l-----~g 93 (308)
T 2dpl_A 20 DSKAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNTGFLRKGEPEFVVKTFRDEFGM-NLHYVDAQDRFFSAL-----KG 93 (308)
T ss_dssp TSCEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCCCTTHHHHHHHHHTTTTCC-EEEEEECHHHHHHHT-----TT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCC-CCEEEECHHHHHHHH-----CC
T ss_conf 998999904889999999999997388689999478878812799999866402586-507996789877765-----28
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHC--------CCCEEEEEECCCCCC
Q ss_conf 865478742013012433599999998856892875001116821567999999858--------797077441006876
Q gi|254780234|r 82 NALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLN--------SDIEIIAPWRHWSFK 153 (404)
Q Consensus 82 na~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~--------P~l~viaP~Rd~~~~ 153 (404)
-.-.+. -..+-.-+....+-++|++.|+++++.|.... |..-....+++.. -+++++.|.++ +
T Consensus 94 v~~pe~----k~~~~~~~~~~~l~~~A~~~g~~~l~~Gt~~~--D~~E~~~gikt~~~~Ggl~~~~~~~~iePL~~--L- 164 (308)
T 2dpl_A 94 VTDPEE----KRKIIGRVFIEVFEEVAKKIGAEYLIQGTIAP--DWIESQGKIKSHHNVGGLPEKLNLKLIEPLRD--L- 164 (308)
T ss_dssp CCCHHH----HHHHHHHHHHHHHHHHHHHHTCSEEECCCCCC-----------------------CCCEEECTTTT--C-
T ss_pred CCCHHH----HHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC--CHHHHCCCEEEEECCCCCCHHHCCCHHHHHHH--H-
T ss_conf 899589----76276089999999999983995851340204--25541353267615788626535441237887--4-
Q ss_pred CHHHHHHHHHHHCCCCC
Q ss_conf 37999999997089675
Q gi|254780234|r 154 GRQDLIDFAEKHAIPID 170 (404)
Q Consensus 154 sRe~~i~ya~~~gIpv~ 170 (404)
.-+|--+.+++-|+|-.
T Consensus 165 ~K~EVR~la~~LGlP~~ 181 (308)
T 2dpl_A 165 YKDEVRELAKFLGLPEK 181 (308)
T ss_dssp CHHHHHHHHHHTTCCHH
T ss_pred CHHHHHHHHHHHCCCHH
T ss_conf 56999999998099989
No 11
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=99.13 E-value=2.5e-09 Score=85.67 Aligned_cols=154 Identities=18% Similarity=0.228 Sum_probs=100.0
Q ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHH---CC-CEEEEEEEECCCC----CHHHHHHHHHHHCCCEEEEEECHHHHHHHH
Q ss_conf 877778999914772599999999871---89-8699999457871----106899999997398079982008999998
Q gi|254780234|r 2 SRDVKKVVLAYSGGLDTSIILKWLQVE---KG-LEVIVFIADLGQG----EELKIASDKARLLGAKEVYVKDLRREFVRD 73 (404)
Q Consensus 2 ~~~~kkVvlaySGGLDTSv~i~~L~~e---~g-~eVi~~~~d~Gq~----~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~ 73 (404)
-+.-+||++|+|||.||++++..|..- .+ ..|.++++|-|.. .|.+.+++-|...|+ ++++...-..-
T Consensus 21 ~~~~~kvlva~SGG~DS~~Ll~~l~~l~~~~~~~~i~~~hv~h~~r~~s~~~~~~v~~~~~~~~i-~~~~~~~~~~~--- 96 (317)
T 1wy5_A 21 FSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNM-KIFVGKEDVRA--- 96 (317)
T ss_dssp CSSCCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTC-CEEEEECCHHH---
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC-CCCCCEEEEEE---
T ss_conf 79978599998182999999999999998779980999996189997559999999999996062-42211023443---
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEE------
Q ss_conf 79999736865478742013012433599999998856892875001116821567999999858797077441------
Q gi|254780234|r 74 FVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPW------ 147 (404)
Q Consensus 74 ~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~------ 147 (404)
... ++.. .....+|-.--+.+.++|++.|++.|+.|-+ .+||+---+---.-+..+..++++
T Consensus 97 ~~~---------~~~~-~~e~~aR~~Ry~~l~~~~~~~~~~~i~~gHh--~dD~~ET~l~~l~rG~~~~gl~~~~~~~~~ 164 (317)
T 1wy5_A 97 FAK---------ENRM-SLEEAGRFLRYKFLKEILESEGFDCIATAHH--LNDLLETSLLFFTRGTGLDGLIGFLPKEEV 164 (317)
T ss_dssp HHH---------HTTC-CHHHHHHHHHHHHHHHHHHHTTCSEEECCCC--HHHHHHHHHHHHHHCCCHHHHHCSCSEETT
T ss_pred ECC---------CCCC-CHHHHHHHHHHHHHHHHHHHHCCCEEEECCC--CCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 114---------7998-8789999999988553234312664676130--122888999887428776788776654332
Q ss_pred --CC-CCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf --00-68763799999999708967566
Q gi|254780234|r 148 --RH-WSFKGRQDLIDFAEKHAIPIDKN 172 (404)
Q Consensus 148 --Rd-~~~~sRe~~i~ya~~~gIpv~~~ 172 (404)
|- .++ ++++..+||+++|||.-..
T Consensus 165 i~RPLl~~-~k~ei~~y~~~~~i~~~~D 191 (317)
T 1wy5_A 165 IRRPLYYV-KRSEIEEYAKFKGLRWVED 191 (317)
T ss_dssp EECTTTTC-CHHHHHHHHHHTTCCCCCC
T ss_pred CCCHHHCC-CHHHHHHHHHHCCCCCCCC
T ss_conf 16604417-7999999999759997889
No 12
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=98.92 E-value=3.7e-08 Score=77.27 Aligned_cols=159 Identities=19% Similarity=0.217 Sum_probs=93.0
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCC--HHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHH
Q ss_conf 98777789999147725999999998718986999994578711--0689999999739807998200899999879999
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGE--ELKIASDKARLLGAKEVYVKDLRREFVRDFVFPM 78 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~--d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~ 78 (404)
|.+ ||+|+.|||||||++++.||+ +.|++|+++++|.||.. +.......+..+... +...+.... ......+.
T Consensus 1 m~k--~k~vvl~SGGlDS~~~a~~l~-~~g~~v~~l~~~ygq~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~ 75 (219)
T 3bl5_A 1 MKK--EKAIVVFSGGQDSTTCLLWAL-KEFEEVETVTFHYNQRHSQEVEVAKSIAEKLGVK-NHLLDMSLL-NQLAPNAL 75 (219)
T ss_dssp --C--CEEEEECCSSHHHHHHHHHHH-HHCSEEEEEEEESSCTTCHHHHHHHHHHHTTCCC-EEEEECGGG-GGGSTGGG
T ss_pred CCC--CEEEEEECCCHHHHHHHHHHH-HCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHH-CCCCHHHHH-HHHCCCCC
T ss_conf 997--739999588188999999999-8799699999988864210457789999985200-011103344-44202421
Q ss_pred HHC---CCCCCCCCCCCCCHHHHHHH-HHHHHHHHHCCCCEEECHH------HCCCCHHHHHHH---HH-HHHCCCCEEE
Q ss_conf 736---86547874201301243359-9999998856892875001------116821567999---99-9858797077
Q gi|254780234|r 79 FRA---NALYEGYYLLGTAIARPLIA-KYLVDIANETGADAIAHGS------TGKGNDQVRFEL---SA-YSLNSDIEII 144 (404)
Q Consensus 79 I~a---na~Yeg~Ypl~tslaRplia-~~lv~~a~~~ga~~iaHG~------TgkGNDQvRFe~---~~-~~l~P~l~vi 144 (404)
... ........+...-..|..+. ....-+|...+++.+.-|- +...+.+..++. .+ .....++.++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 155 (219)
T 3bl5_A 76 TRNDIEIEVKDGELPSTFVPGRNLVFLSFASILAYQIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIH 155 (219)
T ss_dssp C--------------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCC----CCGGGSHHHHHHHHHHHHHHHTSCCEEE
T ss_pred CCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 11203544301455534786103677789999988603441574225666557899837899999999974445503897
Q ss_pred EEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 44100687637999999997089
Q gi|254780234|r 145 APWRHWSFKGRQDLIDFAEKHAI 167 (404)
Q Consensus 145 aP~Rd~~~~sRe~~i~ya~~~gI 167 (404)
+|++. + +-.+.+..+.+.|.
T Consensus 156 ~P~~~--~-~K~eii~~~~~~~~ 175 (219)
T 3bl5_A 156 TPLMW--L-NKAETWKLADELGA 175 (219)
T ss_dssp CTTTT--C-CHHHHHHHHHHTTC
T ss_pred CCCCC--C-CHHHHHHHHHHCCC
T ss_conf 24003--7-29999999998289
No 13
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=98.92 E-value=5.5e-08 Score=76.02 Aligned_cols=153 Identities=18% Similarity=0.212 Sum_probs=99.3
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHH---HHCCCEEEEEEEECCC-CC----HHHHHHHHHHHCCCEEEEEECHHHHHHH
Q ss_conf 98777789999147725999999998---7189869999945787-11----0689999999739807998200899999
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQ---VEKGLEVIVFIADLGQ-GE----ELKIASDKARLLGAKEVYVKDLRREFVR 72 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~---~e~g~eVi~~~~d~Gq-~~----d~~~~~~~A~~~Ga~~~~v~D~r~ef~~ 72 (404)
|-+...||++|+|||.||.+++..|. .+.+++|+++++|-|- ++ |.+.+++-|..+|+ ++++......
T Consensus 14 l~~~~~~v~va~SGG~DS~~Ll~~l~~~~~~~~~~~~~~hvnh~lr~~~s~~~~~~~~~~~~~~~i-~~~~~~~~~~--- 89 (464)
T 3a2k_A 14 LLSEGAAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRI-LCETAQIDVP--- 89 (464)
T ss_dssp SSSCSSBEEEECCSSHHHHHHHHHHHHHHHTTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTC-EEEEEECCCH---
T ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCC-EEEEEEEEEE---
T ss_conf 999839899998071999999999999889729859999977989986669999999999998499-1999998600---
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHH--HHHHHHH-----HCC------
Q ss_conf 879999736865478742013012433599999998856892875001116821567--9999998-----587------
Q gi|254780234|r 73 DFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVR--FELSAYS-----LNS------ 139 (404)
Q Consensus 73 ~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvR--Fe~~~~~-----l~P------ 139 (404)
++. +. . -....+.+|-+--+.+.++|++.|+++|+.|-+ .+||+- |=..++- |.+
T Consensus 90 ~~~----~~----~--~~~~e~~aR~~Ry~~~~~~~~~~~~~~i~~aHh--~dD~~ET~l~~l~rg~~~~gl~~~~~~~~ 157 (464)
T 3a2k_A 90 AFQ----RS----A--GLGAQEAARICRYRFFAELMEKHQAGYVAVGHH--GDDQVETILMRLVRGSTSKGYAGIPVKRP 157 (464)
T ss_dssp HHH----TT----T--TCCSHHHHHHHHHHHHHHHHHTTTCCEEECCCC--HHHHHHHHHHHHHHCCCSSSTTCSCSEEE
T ss_pred HHH----CC----C--CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE--CCCHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 110----25----8--989899999999876412333456315875420--47589999987543100123345532133
Q ss_pred --CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf --970774410068763799999999708967566
Q gi|254780234|r 140 --DIEIIAPWRHWSFKGRQDLIDFAEKHAIPIDKN 172 (404)
Q Consensus 140 --~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~~~ 172 (404)
...++=|+. ++ +|++..+||++++||.-..
T Consensus 158 ~~~~~~iRPll--~~-~k~ei~~y~~~~~l~~~~D 189 (464)
T 3a2k_A 158 FHGGYLIRPFL--AV-SRAEIEAYCRQMGLSPRCD 189 (464)
T ss_dssp CSSSEEECGGG--GS-CHHHHHHHHHHTCCSSCSC
T ss_pred CCCCCCHHHHH--HH-HHHHHHHHHHHHCCCCCCC
T ss_conf 34565778999--75-7999999999848986668
No 14
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATP, ATPase, PP-type, PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=98.84 E-value=2.6e-07 Score=71.24 Aligned_cols=146 Identities=17% Similarity=0.262 Sum_probs=92.5
Q ss_pred CCEEEEEECCCHHHHHHHHHHHH----HCCCEEEEEEEECCC-C---CHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHH
Q ss_conf 77899991477259999999987----189869999945787-1---106899999997398079982008999998799
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQV----EKGLEVIVFIADLGQ-G---EELKIASDKARLLGAKEVYVKDLRREFVRDFVF 76 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~----e~g~eVi~~~~d~Gq-~---~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~ 76 (404)
.|||++|+|||.||.+++..|.. ..+++++++++|-|- + +|.+.+++-|.++|. ++++.+....
T Consensus 13 ~~~vlva~SGG~DS~~ll~~l~~~~~~~~~~~~~~~h~~h~~r~~s~~~~~~v~~~~~~~~i-~~~~~~~~~~------- 84 (433)
T 1ni5_A 13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQV-PLVVERVQLA------- 84 (433)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTC-CEEEECCCCC-------
T ss_pred CCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC-CEEEEEEECC-------
T ss_conf 98299998180999999999999897589981999998298895579999999999997599-7899999647-------
Q ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHC----CC-CEEEEEE----
Q ss_conf 99736865478742013012433599999998856892875001116821567999999858----79-7077441----
Q gi|254780234|r 77 PMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLN----SD-IEIIAPW---- 147 (404)
Q Consensus 77 ~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~----P~-l~viaP~---- 147 (404)
..+... -+.+|-. +...-.+...++++|+.|-+ .|||+- ..+..|. ++ +.-+.|.
T Consensus 85 --------~~~~~~--e~~aR~~--Ry~~~~~~~~~~~~i~~aHh--~dD~~E--t~l~~l~rg~~~~gl~~~~~~~~~~ 148 (433)
T 1ni5_A 85 --------QEGLGI--EAQARQA--RYQAFARTLLPGEVLVTAQH--LDDQCE--TFLLALKRGSGPAGLSAMAEVSEFA 148 (433)
T ss_dssp --------CSSSTT--TTHHHHH--HHHHHHHTCCTTEEEECCCC--HHHHHH--HHHHHHTTTCCTTGGGCCCSEEEET
T ss_pred --------CCCCCH--HHHHHHH--HHHHHHHHHCCCCEEEEEEE--CHHHHH--HHHHHHHCCCCCCCCCCCCCEECCC
T ss_conf --------888887--9999999--99987865416570322001--103899--9999872577643343432221157
Q ss_pred -----CC-CCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf -----00-68763799999999708967566567
Q gi|254780234|r 148 -----RH-WSFKGRQDLIDFAEKHAIPIDKNKRG 175 (404)
Q Consensus 148 -----Rd-~~~~sRe~~i~ya~~~gIpv~~~~~~ 175 (404)
|- .++ +|++..+||+++|||.-....+
T Consensus 149 ~~~i~RPlL~~-~k~ei~~y~~~~~i~~~eD~SN 181 (433)
T 1ni5_A 149 GTRLIRPLLAR-TRGELVQWARQYDLRWIEDESN 181 (433)
T ss_dssp TEEEECGGGSC-CHHHHHHHHHHTTCCCBCCCCG
T ss_pred CCEEEEECCCC-CHHHHHHHHHHCCCCCCCCCCC
T ss_conf 85088750018-6999999987467762036677
No 15
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=98.82 E-value=5.7e-08 Score=75.97 Aligned_cols=163 Identities=21% Similarity=0.306 Sum_probs=103.3
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCC-CEEEEEEEECCC--CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHH-HHHH
Q ss_conf 77899991477259999999987189-869999945787--1106899999997398079982008999998799-9973
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEKG-LEVIVFIADLGQ--GEELKIASDKARLLGAKEVYVKDLRREFVRDFVF-PMFR 80 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~g-~eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~-~~I~ 80 (404)
.+||++|.|||+|||||..+|..--| -.|+|+.+|-|+ ..|.+.+++...++|. +..++|+.+.|....+. |.-.
T Consensus 240 ~~kVl~~lSGGVDStV~A~Ll~kAlG~drl~~v~IDnGlmRk~E~~~V~~~~~~lgl-~l~~vdas~~F~~~~t~~~~~~ 318 (697)
T 2vxo_A 240 TSKVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGI-QVKVINAAHSFYNGTTTLPISD 318 (697)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHHSCGGGEEEEEEECSCCCSSTTHHHHHHHHHTTC-CEEEEECHHHHHTCCCBCC---
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC-CEEEECCHHHHHCCCCCCCCCC
T ss_conf 844899505872069999999985164746999826544775549999999998399-6799826786413544543334
Q ss_pred CCCCCCCCC---CCCCC---HHHHHHHHHHHH----HHHHCC----CCEEECHHH-----------CCCC-HHHHH----
Q ss_conf 686547874---20130---124335999999----988568----928750011-----------1682-15679----
Q gi|254780234|r 81 ANALYEGYY---LLGTA---IARPLIAKYLVD----IANETG----ADAIAHGST-----------GKGN-DQVRF---- 130 (404)
Q Consensus 81 ana~Yeg~Y---pl~ts---laRplia~~lv~----~a~~~g----a~~iaHG~T-----------gkGN-DQvRF---- 130 (404)
.+.....++ +-++. --|-.|.+.-++ ++++.+ +..+++|.. ++|+ +-+.-
T Consensus 319 ~~~~~~~~~l~~L~gv~dPEeKRKIIG~tFi~Vfe~~~~~~~~~~~~~~L~QGTlypDvIES~~~~~~~~a~~IKsHHNv 398 (697)
T 2vxo_A 319 EDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHND 398 (697)
T ss_dssp -------CBCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTCCCTTSEEEECCCSSCCSBCCHHHHHHSCCCGGGSCCSS
T ss_pred CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCEEEECCC
T ss_conf 45206788999752877889976565076599999888774146411043236517034302566777765545501115
Q ss_pred -HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf -999998587970774410068763799999999708967566
Q gi|254780234|r 131 -ELSAYSLNSDIEIIAPWRHWSFKGRQDLIDFAEKHAIPIDKN 172 (404)
Q Consensus 131 -e~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~~~ 172 (404)
.+ .+.+.-+++++-|.|+ |- .+|--+..++-|+|-..-
T Consensus 399 ggL-p~~l~~~~~~vEPLr~--Lf-KDEVR~lG~~LGlP~~iv 437 (697)
T 2vxo_A 399 TEL-IRKLREEGKVIEPLKD--FH-KDEVRILGRELGLPEELV 437 (697)
T ss_dssp CHH-HHHHHHTTCEECGGGG--SC-HHHHHHHHHHTTCCHHHH
T ss_pred CCC-CHHHHCCCCCCCHHHH--HH-HHHHHHHHHHHCCCHHHH
T ss_conf 777-4433013540346777--74-799999999869888981
No 16
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni}
Probab=98.78 E-value=1.1e-07 Score=73.83 Aligned_cols=148 Identities=17% Similarity=0.199 Sum_probs=97.4
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHC
Q ss_conf 777899991477259999999987189869999945787--110689999999739807998200899999879999736
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRA 81 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~a 81 (404)
..++|||++|||+||||++..+..--|..|+|++++.+. ..+.+++++-|..+|. ++.+++..+.+ ..++.
T Consensus 25 g~~~vvlglSGGVDSsv~a~La~~al~~~v~~v~~~~~~~~~~~~~~a~~la~~lgi-~~~~~~~~~~~-~~~~~----- 97 (249)
T 3p52_A 25 QSQGVVLGLSGGIDSALVATLCKRALKENVFALLMPTQISNKANLEDALRLCADLNL-EYKIIEIQSIL-DAFIK----- 97 (249)
T ss_dssp SCSEEEEECCSSHHHHHHHHHHHHHHTTSEEEEECCSCCSSCHHHHHHHHHHHHHTC-EEEECCCHHHH-HHHHT-----
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCCEEHHHHHH-HHHHH-----
T ss_conf 998299978898899999999998448717998578411000689999999998177-60000014688-88751-----
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCC-EEEEEECCCCCCCHHHHHH
Q ss_conf 865478742013012433599999998856892875001116821567999999858797-0774410068763799999
Q gi|254780234|r 82 NALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDI-EIIAPWRHWSFKGRQDLID 160 (404)
Q Consensus 82 na~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l-~viaP~Rd~~~~sRe~~i~ 160 (404)
+.......-...--+| +-...+..+|.+.|..++.. ||--- +...+.+..-+. ..++|.++ +. ..+--+
T Consensus 98 ~~~~~~~~~~~n~~ar-~r~~~l~~~a~~~~~~v~~t-----~nkse-~~~G~~tk~gd~~~~~~Pl~~--L~-K~eVr~ 167 (249)
T 3p52_A 98 QSENTTLVSLGNFAAR-IRMSLLYDYSALKNSLVIGT-----SNKSE-LLLGYGTIYGDLACAFNPIGS--LY-KSEIYA 167 (249)
T ss_dssp TCSCCCHHHHHHHHHH-HHHHHHHHHHHHTTEEEBCC-----CCHHH-HHHTCSCTTTTTCCSEETTTT--SC-HHHHHH
T ss_pred CCCCCCHHHHHHHHHH-HHHHHHHHHHHHCCCEEECC-----CCHHH-HHCCCHHHHHHCCCCCCCCCC--CC-HHHHHH
T ss_conf 0010004678899998-87899987663528557678-----85554-525732235315652001579--78-999999
Q ss_pred HHHHHCCC
Q ss_conf 99970896
Q gi|254780234|r 161 FAEKHAIP 168 (404)
Q Consensus 161 ya~~~gIp 168 (404)
.++..|+|
T Consensus 168 La~~lg~p 175 (249)
T 3p52_A 168 LAKYLNLH 175 (249)
T ss_dssp HHHHTTCC
T ss_pred HHHHHCCH
T ss_conf 99996981
No 17
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=98.74 E-value=5.6e-08 Score=75.97 Aligned_cols=148 Identities=18% Similarity=0.123 Sum_probs=94.1
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHC
Q ss_conf 777899991477259999999987189869999945787--110689999999739807998200899999879999736
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRA 81 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~a 81 (404)
..|+||+++|||+||||++.+++.-.+-.|+|++++.+. +++.++++..|..+|. ++.++|...-+ +.....+..
T Consensus 24 g~k~vvvglSGGVDSav~A~La~~a~~~~v~~v~mp~~~~~~~~~~~A~~~a~~Lgi-~~~~i~~~~~~--~~~~~~~~~ 100 (268)
T 1xng_A 24 GFKKVVYGLSGGLDSAVVGVLCQKVFKENAHALLMPSSVSMPENKTDALNLCEKFSI-PYTEYSIAPYD--AIFSSHFKD 100 (268)
T ss_dssp TCCCEEEECCSSHHHHHHHHHHHHHHGGGEEEEECCCSSSCHHHHHHHHHHHHHHTC-CEEECCCHHHH--HHHHHHCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEECCCHHCCHHHHHHHHHHHHHHHH-CCCCCCHHHHH--HHHHHHHHH
T ss_conf 998199978688999999999998503226787135010571557999999998330-23013279999--888875012
Q ss_pred CCCCCCCCCCC--CCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH
Q ss_conf 86547874201--3012433599999998856892875001116821567999999858797077441006876379999
Q gi|254780234|r 82 NALYEGYYLLG--TAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQDLI 159 (404)
Q Consensus 82 na~Yeg~Ypl~--tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~~i 159 (404)
. .... -.-+|- -...+...|.+.|..++++ ||.---+-.++..-+-....++|+++ + ...+--
T Consensus 101 ~------~~~~~~n~~aR~-r~~~ly~~a~~~~~~v~gt-----~n~~e~~~g~~t~~gd~~~~~~Pl~~--L-~K~eVr 165 (268)
T 1xng_A 101 A------SLTRKGNFCARL-RMAFLYDYSLKSDSLVIGT-----SNKSERMLGYGTLFGDLACAINPIGE--L-FKTEVY 165 (268)
T ss_dssp C------CHHHHHHHHHHH-HHHHHHHHHHHHTCEEBCC-----CCHHHHHHTCSCTTTTTCCSEETTTT--S-CHHHHH
T ss_pred H------HHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCC-----CCCCCEEECCCCCHHHHCCCCCCCCC--C-CHHHHH
T ss_conf 4------567877889998-7888888899709824688-----77543103567655542668411469--7-099999
Q ss_pred HHHHHHCCCC
Q ss_conf 9999708967
Q gi|254780234|r 160 DFAEKHAIPI 169 (404)
Q Consensus 160 ~ya~~~gIpv 169 (404)
+.|+..|||-
T Consensus 166 ~LAr~lglP~ 175 (268)
T 1xng_A 166 ELARRLNIPK 175 (268)
T ss_dssp HHHHHTTCCH
T ss_pred HHHHHCCCCH
T ss_conf 9999809969
No 18
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=98.74 E-value=1.8e-07 Score=72.34 Aligned_cols=152 Identities=17% Similarity=0.257 Sum_probs=93.5
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHC
Q ss_conf 777899991477259999999987189869999945787--110689999999739807998200899999879999736
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRA 81 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~a 81 (404)
..++||+++|||+||||++..+. +.+.+|+++++.... .++.+++++-|..+|+ +++++|...-+ +.+. ..+..
T Consensus 28 ~~~~vvvglSGGVDSav~A~L~~-~a~~~v~~v~m~~~~~~~~~~~dA~~la~~Lgi-~~~~i~~~~~~-~~~~-~~~~~ 103 (249)
T 3fiu_A 28 PAEGFVIGLSGGIDSAVAASLAV-KTGLPTTALILPSDNNQHQDMQDALELIEMLNI-EHYTISIQPAY-EAFL-ASTQS 103 (249)
T ss_dssp TCSEEEEECCSSHHHHHHHHHHH-HTTSCEEEEECCCTTSCHHHHHHHHHHHHHHTC-EEEECCCHHHH-HHHH-HHTGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC-CCCHHHHHHHH-HHHH-HHHHH
T ss_conf 99829996779899999999999-829875252368763306899999999987167-63002465789-9999-99754
Q ss_pred CCCC-CCCCCCCCCH--HHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCC-CEEEEEECCCCCCCHHH
Q ss_conf 8654-7874201301--243359999999885689287500111682156799999985879-70774410068763799
Q gi|254780234|r 82 NALY-EGYYLLGTAI--ARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSD-IEIIAPWRHWSFKGRQD 157 (404)
Q Consensus 82 na~Y-eg~Ypl~tsl--aRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~-l~viaP~Rd~~~~sRe~ 157 (404)
-... +..+.....- +| +-...+...|...++-.++.| ..++.++ .+.+..-+ ...+.|.++ +. ..+
T Consensus 104 ~~~~~~~~~~~~~~N~~ar-~r~~~l~~~a~~~~~lv~gt~----n~se~~~--G~~tk~gd~~~di~Pl~~--L~-K~e 173 (249)
T 3fiu_A 104 FTNLQNNRQLVIKGNAQAR-LRMMYLYAYAQQYNRIVIGTD----NACEWYM--GYFTKFGDGAADILPLVN--LK-KSQ 173 (249)
T ss_dssp GC------CHHHHHHHHHH-HHHHHHHHHHHHHTEEEBCCC----CHHHHHH--TCSCTTTTTCCSBCTTTT--CC-HHH
T ss_pred HHCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHCCCEEECCC----CCCCHHC--CCCCCCCCCCCCHHHCCC--EE-HHH
T ss_conf 1033540569998767899-999899998741598401798----6431012--424545787754342268--07-999
Q ss_pred HHHHHHHHCCCC
Q ss_conf 999999708967
Q gi|254780234|r 158 LIDFAEKHAIPI 169 (404)
Q Consensus 158 ~i~ya~~~gIpv 169 (404)
--+.++..|+|-
T Consensus 174 Vr~la~~lglP~ 185 (249)
T 3fiu_A 174 VFELGKYLDVPK 185 (249)
T ss_dssp HHHHHHHTTCCH
T ss_pred HHHHHHHCCCCH
T ss_conf 999999819999
No 19
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Pyrococcus horikoshii OT3}
Probab=98.64 E-value=3.9e-07 Score=69.97 Aligned_cols=149 Identities=21% Similarity=0.235 Sum_probs=97.9
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCC-CEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCC
Q ss_conf 77899991477259999999987189-86999994578711068999999973980799820089999987999973686
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEKG-LEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANA 83 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~g-~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana 83 (404)
.++||+++|||+||||++.++.+--| ..|++++.+..+.++.++++..+..+|+ ++++++..+.|- .+. ..+..+.
T Consensus 22 ~~~vvvglSGGVDSav~A~La~~AlG~~~v~~v~~~~~~~~~~~~A~~~~~~lgi-~~~~i~i~~~~~-~~~-~~l~~~~ 98 (257)
T 2e18_A 22 NNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFENKDVEDAKLVAEKLGI-GYKVINIKPIVD-SFV-ENLELNL 98 (257)
T ss_dssp TTCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCSSCSTHHHHHHHHHHHHTC-EEEECCCHHHHH-HHH-HHHCSCC
T ss_pred CCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC-CCCEEECCHHHH-HHH-HHHHHHH
T ss_conf 9978996887799999999999863864168851576530347999999986378-730243047899-999-9864556
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCC-CEEEEEECCCCCCCHHHHHHHH
Q ss_conf 547874201301243359999999885689287500111682156799999985879-7077441006876379999999
Q gi|254780234|r 84 LYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSD-IEIIAPWRHWSFKGRQDLIDFA 162 (404)
Q Consensus 84 ~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~-l~viaP~Rd~~~~sRe~~i~ya 162 (404)
...-.+--.+|-- ...+...|...|+-++..| |.-. ....+.+..-+ ...++|..+ +. ..+--+.+
T Consensus 99 ---~~~~~~ni~ar~r-~~~l~~~a~~~~~~vl~t~-----n~se-~~~g~~t~~gd~~~~~~Pl~d--L~-K~eVr~La 165 (257)
T 2e18_A 99 ---DRKGLGNIMSRTR-MIMLYAHANSLGRIVLGTS-----NRSE-FLTGYFTKWGDGASDYAPIIN--LY-KTEVWEIA 165 (257)
T ss_dssp ---CHHHHHHHHHHHH-HHHHHHHHHHHTCEEECCC-----CHHH-HHHTCSCTTSTTCSSBCTTTT--SC-HHHHHHHH
T ss_pred ---HHHHHHHHHHHHH-HHHHHHHHHHCCCEEECCC-----CCCH-HHEECCCCCCCCCCCCCCCCC--CC-HHHHHHHH
T ss_conf ---6777887898886-8999999886397794478-----7342-320135556754577654568--84-99999999
Q ss_pred HHHCCCC
Q ss_conf 9708967
Q gi|254780234|r 163 EKHAIPI 169 (404)
Q Consensus 163 ~~~gIpv 169 (404)
+.-|+|-
T Consensus 166 ~~Lglp~ 172 (257)
T 2e18_A 166 KRIGVPE 172 (257)
T ss_dssp HHHTCCH
T ss_pred HHCCCCH
T ss_conf 9849996
No 20
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphatase, transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli K12} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=98.64 E-value=6.9e-07 Score=68.17 Aligned_cols=150 Identities=18% Similarity=0.301 Sum_probs=98.6
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--CCHHHHHHHHHHH-CCCEEEEEECHHHHHHHHHHHHHHHC
Q ss_conf 77899991477259999999987189869999945787--1106899999997-39807998200899999879999736
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--GEELKIASDKARL-LGAKEVYVKDLRREFVRDFVFPMFRA 81 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~~d~~~~~~~A~~-~Ga~~~~v~D~r~ef~~~~i~~~I~a 81 (404)
.+||++|.|||+|||||..+|..--|-.++|+.+|.|- ..|.+.+.+.... +|. ...++|+++.|... ++.
T Consensus 227 ~~kVi~~lSGGVDSsV~A~Ll~kAig~~l~cvfvD~GllRk~E~~~v~~~~~~~~~~-~~~~vda~~~Fl~~-----L~g 300 (525)
T 1gpm_A 227 DDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGL-NIVHVPAEDRFLSA-----LAG 300 (525)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCSCTTHHHHHHHHHTTTTCC-CEEEEECHHHHHHH-----HTT
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC-EEEEECCHHHHHHH-----HCC
T ss_conf 870799724882169999999873056068998278766467299999999986297-07997618888997-----548
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHH----HH-CCCCEEECHH----------HCCCCHH-HHHHHHHHHH--CCCCEE
Q ss_conf 865478742013012433599999998----85-6892875001----------1168215-6799999985--879707
Q gi|254780234|r 82 NALYEGYYLLGTAIARPLIAKYLVDIA----NE-TGADAIAHGS----------TGKGNDQ-VRFELSAYSL--NSDIEI 143 (404)
Q Consensus 82 na~Yeg~Ypl~tslaRplia~~lv~~a----~~-~ga~~iaHG~----------TgkGNDQ-vRFe~~~~~l--~P~l~v 143 (404)
-.--| --|-.|.+.-+++. ++ .+++.+|+|- .++|+.. +.-.-..--| .-++++
T Consensus 301 v~dPE--------~KRkiIG~~Fi~vf~~~~~~~~~~~~L~QGTlypDviEs~~~~~~~a~~IKsHHNvgglp~~~~~~l 372 (525)
T 1gpm_A 301 ENDPE--------AKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGL 372 (525)
T ss_dssp CCCHH--------HHHHHHHHHHHHHHHHHHHHSSSEEEEECCCCHHHHHHTTC----------------------CCEE
T ss_pred CCCHH--------HHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCE
T ss_conf 76888--------9604001789999999985025770884044244066541477898773476534676510146630
Q ss_pred EEEECCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 7441006876379999999970896756
Q gi|254780234|r 144 IAPWRHWSFKGRQDLIDFAEKHAIPIDK 171 (404)
Q Consensus 144 iaP~Rd~~~~sRe~~i~ya~~~gIpv~~ 171 (404)
+-|.|| |- .+|--+..++-|+|-..
T Consensus 373 iEPl~~--l~-KdEVR~lg~~Lglp~~~ 397 (525)
T 1gpm_A 373 VEPLKE--LF-KDEVRKIGLELGLPYDM 397 (525)
T ss_dssp ECTTTT--CC-HHHHHHHHHHTTCCHHH
T ss_pred ECHHHH--HH-HHHHHHHHHHHCCCHHH
T ss_conf 043888--85-89999999872998888
No 21
>2d13_A Hypothetical protein PH1257; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Pyrococcus horikoshii} SCOP: c.26.2.1 PDB: 3h7e_A* 1ru8_A
Probab=98.61 E-value=1.1e-06 Score=66.60 Aligned_cols=157 Identities=20% Similarity=0.259 Sum_probs=109.3
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEE-ECC-------CCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHH
Q ss_conf 77789999147725999999998718986999994-578-------7110689999999739807998200899999879
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIA-DLG-------QGEELKIASDKARLLGAKEVYVKDLRREFVRDFV 75 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~-d~G-------q~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i 75 (404)
.|.+|++.||||-||++++.++. ++|++|+++.. --. |....+-++..|..+|. +.+.+....
T Consensus 3 ~~~~v~vl~SGGKDS~lAl~~a~-~~G~~v~~L~t~~~~~~~s~~~h~~~~~ll~~qA~algi-PL~~~~~~~------- 73 (227)
T 2d13_A 3 GLADVAVLYSGGKDSNYALYWAL-KSGLRVRYLVSMVSENEESYMYHTPNVELTSLQARALGI-PIIKGFTKG------- 73 (227)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECCC---------CCTTHHHHHHHHTC-CEEEEEC---------
T ss_pred CCCCEEEECCCCHHHHHHHHHHH-HCCCEEEEEEEEECCCCCCEECCCCCHHHHHHHHHHCCC-CEEEEECCC-------
T ss_conf 86649999368699999999999-869927999997438888141557789999999997599-717874678-------
Q ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCH
Q ss_conf 99973686547874201301243359999999885689287500111682156799999985879707744100687637
Q gi|254780234|r 76 FPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGR 155 (404)
Q Consensus 76 ~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sR 155 (404)
.|+. -...+.+..++.+.++|++|.-..--..-|.|..+..+ .++.+.|. |+.. +
T Consensus 74 --------~~e~------------~~~~l~~~l~~~~v~~iv~Gdi~~~~~~~~~e~~~~~~--gl~~~~PL--W~~d-~ 128 (227)
T 2d13_A 74 --------EKEK------------EVEDLKNVLEGLKVDGIVAGALASRYQKERIENVAREL--GLKVYTPA--WEKD-P 128 (227)
T ss_dssp --------CTTS------------HHHHHHHHHHTBCCSEEECCCSSCHHHHHHHHHHHHHH--TCEEECTT--TTCC-H
T ss_pred --------CHHH------------HHHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHC--CCEEECCC--CCCC-H
T ss_conf --------6158------------99999999997175607862376288999999999874--98887332--4887-7
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 99999999708967566567886415724311545763245
Q gi|254780234|r 156 QDLIDFAEKHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLE 196 (404)
Q Consensus 156 e~~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Le 196 (404)
++.+.-+-+.|+.+-.... .++-.|+...|+.+.-..++
T Consensus 129 ~~ll~e~i~~G~~aiiv~v--~~~~L~~~~lGr~l~~~~~~ 167 (227)
T 2d13_A 129 YQYMLEIIKLGFKVVFVAV--SAYGLNESWLGRELNYKNLE 167 (227)
T ss_dssp HHHHHHHHHTTCEEEEEEE--CSTTCCGGGTTCBCCHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEE--CCCCCCHHHCCCCCCHHHHH
T ss_conf 9999999987990999997--45899968917733497899
No 22
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei 1710B}
Probab=98.54 E-value=6.1e-06 Score=61.39 Aligned_cols=153 Identities=14% Similarity=0.135 Sum_probs=87.4
Q ss_pred CCCEEEEEECCCHHHHHHHHHHH------HHCCCEEEEEEEECC--CCCHHHHHHH-HHHHCCCEEEEEECHHHHHHHHH
Q ss_conf 77789999147725999999998------718986999994578--7110689999-99973980799820089999987
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQ------VEKGLEVIVFIADLG--QGEELKIASD-KARLLGAKEVYVKDLRREFVRDF 74 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~------~e~g~eVi~~~~d~G--q~~d~~~~~~-~A~~~Ga~~~~v~D~r~ef~~~~ 74 (404)
.+++||++.|||+||||++..+. ...|+++.++++..- ...+..++++ -|..+|. +++++|.++.| +.+
T Consensus 45 g~k~vVvGlSGGVDSaV~A~L~~~a~g~~~~~g~~~~~v~~~~~~~~~~~~~da~~~~a~~lgi-~~~~i~i~~~~-~~~ 122 (285)
T 3dpi_A 45 GLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYGAQHDEADARRALAFVRAD-ETLTVDVKPAA-DAM 122 (285)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSCC---CHHHHHHHHHHCCS-EEEECCCHHHH-HHH
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC-CCEEEECCHHH-HHH
T ss_conf 9996999788889999999999999887346776637999847878865599999999985387-53055120588-888
Q ss_pred HHHHHHCC-CCCCCCCCCCCCHHHHHHHH----HHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCE-EEEEEC
Q ss_conf 99997368-65478742013012433599----9999988568928750011168215679999998587970-774410
Q gi|254780234|r 75 VFPMFRAN-ALYEGYYLLGTAIARPLIAK----YLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIE-IIAPWR 148 (404)
Q Consensus 75 i~~~I~an-a~Yeg~Ypl~tslaRplia~----~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~-viaP~R 148 (404)
+ ..+... ..+.+..+.-.++.. +.++ .+-.+|...|+-+++ -||.-.-+ ..+.++.-|.. -++|+.
T Consensus 123 ~-~~l~~~~~~~~~~~~~~~~~~N-i~aR~R~~~ly~~A~~~~~lVlg-----TgNksE~~-~Gy~tk~gD~~~di~PLg 194 (285)
T 3dpi_A 123 L-AALAAGGLAYLDHAQQDFVLGN-IKARERMIAQYAVAGARNGVVIG-----TDHAAESV-MGFFTKFGDGGADVLPLA 194 (285)
T ss_dssp H-HHHHHTTCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHTTEEEBC-----CCCHHHHH-HHHHHCCCCCCCSBCTTT
T ss_pred H-HHHHHCCCCCCCCCHHHHHHCC-HHHHHHHHHHHHHHHHCCCEEEE-----CCCCCCEE-EEEEEECCCCHHHHHHHH
T ss_conf 9-9987515657884122578615-79988878899998754988983-----79876103-653465176164798862
Q ss_pred CCCCCCHHHHHHHHHHHCCCC
Q ss_conf 068763799999999708967
Q gi|254780234|r 149 HWSFKGRQDLIDFAEKHAIPI 169 (404)
Q Consensus 149 d~~~~sRe~~i~ya~~~gIpv 169 (404)
+ + ...+-.+.|+..|+|-
T Consensus 195 d--L-~K~eVr~lAr~lglP~ 212 (285)
T 3dpi_A 195 G--L-TKRRVRALARMLGADE 212 (285)
T ss_dssp T--C-CHHHHHHHHHHTTCCH
T ss_pred C--C-CHHHHHHHHHHHCCCH
T ss_conf 7--8-9999999999848976
No 23
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway; 2.10A {Thermus thermophilus HB8} PDB: 2ywc_A*
Probab=98.51 E-value=9.7e-07 Score=67.12 Aligned_cols=148 Identities=24% Similarity=0.404 Sum_probs=99.3
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCC
Q ss_conf 77899991477259999999987189869999945787--1106899999997398079982008999998799997368
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRAN 82 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~an 82 (404)
.+||++|.|||+||||+..+|..- +-+.+|+.+|.|- ..|.+.+.+...++|. +..++|+.+.|.+. ++.=
T Consensus 209 ~~~Vi~~lSGGVDSsV~A~Ll~kA-~~~~~cvfVD~GllRk~E~~~v~~~~~~~~~-~~~~vda~~~Fl~~-----L~gv 281 (503)
T 2ywb_A 209 KDRVLLAVSGGVDSSTLALLLAKA-GVDHLAVFVDHGLLRLGEREEVEGALRALGV-NLLVVDAKERFLKA-----LKGV 281 (503)
T ss_dssp TSEEEEEECSSHHHHHHHHHHHHH-TCEEEEEEEECSCSCTTHHHHHHHHHHHTTC-CEEEEECHHHHHHH-----HTTC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHH-HHHEEEEEECCCCCCCCHHHHHHHHHHHCCC-CEEEEECHHHHHHH-----HCCC
T ss_conf 861799834870659999999997-6530899946876657609999999987498-58999604877786-----2598
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHH----HHHHHCC-CCEEECHHH---------CCCCHHHHHHHHHHHHC--CCCEEEEE
Q ss_conf 65478742013012433599999----9988568-928750011---------16821567999999858--79707744
Q gi|254780234|r 83 ALYEGYYLLGTAIARPLIAKYLV----DIANETG-ADAIAHGST---------GKGNDQVRFELSAYSLN--SDIEIIAP 146 (404)
Q Consensus 83 a~Yeg~Ypl~tslaRplia~~lv----~~a~~~g-a~~iaHG~T---------gkGNDQvRFe~~~~~l~--P~l~viaP 146 (404)
.--| --|-+|.+.-+ +.|++.+ ++.+|+|-. ++|.+.+.-.-...-|- =.++++-|
T Consensus 282 ~dPE--------~KRkiIG~~Fi~vfe~~~~~~~~~~~L~QGTlypDvIES~~~~~~~~iKsHHNvgglp~~~~~klvEP 353 (503)
T 2ywb_A 282 EDPE--------EKRKIIGREFVAAFSQVARERGPFRFLAQGTLYPDVIESAGGHGAAKIKSHHNVGGLPEDLEFELLEP 353 (503)
T ss_dssp CCHH--------HHHHHHHHHHHHHHHHHHHHHCCCSEEECCCCHHHHHC-----------------CCCSSCCCEEECT
T ss_pred CCHH--------HHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHCCHHHHH
T ss_conf 7958--------97432038999999999875489679952761365340367777777603156886446623004568
Q ss_pred ECCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 100687637999999997089675
Q gi|254780234|r 147 WRHWSFKGRQDLIDFAEKHAIPID 170 (404)
Q Consensus 147 ~Rd~~~~sRe~~i~ya~~~gIpv~ 170 (404)
.|+ | -.+|--+-.++-|+|-.
T Consensus 354 l~~--l-fKdEVR~lg~~Lglp~~ 374 (503)
T 2ywb_A 354 FRL--L-FKDEVRELALLLGLPDT 374 (503)
T ss_dssp TTT--C-CHHHHHHHHHHTTCCHH
T ss_pred HHH--H-HHHHHHHHHHHHCCCHH
T ss_conf 999--8-57899999998689899
No 24
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.31 E-value=1.6e-06 Score=65.56 Aligned_cols=152 Identities=14% Similarity=0.198 Sum_probs=95.7
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCC
Q ss_conf 7899991477259999999987189869999945787--11068999999973980799820089999987999973686
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANA 83 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana 83 (404)
+|+++++|||.||+|++.+++ +.+.++-.+++|.|- ++-++-+++-+...|. +..++........... .....
T Consensus 46 ~~~~vs~SgGkDS~VlLhL~~-k~~~~~~vvfvDTg~efpET~~~~~~~~~~~~l-~i~v~~~~~~~~~~~~---~~~~~ 120 (252)
T 2o8v_A 46 GEYVLSSSFGIQAAVSLHLVN-QIRPDIPVILTDTGYLFPETYRFIDELTDKLKL-NLKVYRATESAAWQEA---RYGKL 120 (252)
T ss_dssp SCEEEECCCSTTHHHHHHHHH-HHSTTCEEEECCCSCBCHHHHHHHHHHHHHTTC-EEEECCCSSCHHHHHH---HTCCG
T ss_pred CCEEEEECCCHHHHHHHHHHH-HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC-CEEEECCCCHHHHHHH---HCCCC
T ss_conf 988999468779999999999-618998679976899999999999999997398-6279668711688873---51676
Q ss_pred CCCCCCCCCCCHHHH---HHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH
Q ss_conf 547874201301243---35999999988568928750011168215679999998587970774410068763799999
Q gi|254780234|r 84 LYEGYYLLGTAIARP---LIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQDLID 160 (404)
Q Consensus 84 ~Yeg~Ypl~tslaRp---lia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ 160 (404)
.+.+ .....+. ....-+-++.++.+.+++.-|-. +.+.--|-...+-...+.+-.+.|+-+| +.++-.+
T Consensus 121 ~~~~----~~~~~~cc~~~K~~p~~~~l~~~~~~~~i~G~R-~~Es~~Ra~~~~~~~~~~~~kv~PI~~W---t~~DVw~ 192 (252)
T 2o8v_A 121 WEQG----VEGIEKYNDINKVEPMNRALKELNAQTWFAGLR-REQSGSRANLPVLAIQRGVFKVLPIIDW---DNRTIYQ 192 (252)
T ss_dssp GGSH----HHHHHHHHHHHTHHHHHHHHHHTTCSEEEECCC-STTTTCCTTSCSEEESSSSEEECGGGSC---CHHHHHH
T ss_pred CCCC----CCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCE-ECCCCCCCCCCCEECCCCCCCCCCHHHC---CHHHHHH
T ss_conf 6678----506778645775514999986328500013740-1786220148634315990130873769---8999999
Q ss_pred HHHHHCCCCC
Q ss_conf 9997089675
Q gi|254780234|r 161 FAEKHAIPID 170 (404)
Q Consensus 161 ya~~~gIpv~ 170 (404)
|++++|||+.
T Consensus 193 Yi~~~~lp~n 202 (252)
T 2o8v_A 193 YLQKHGLKYH 202 (252)
T ss_dssp HHHHTTCCCC
T ss_pred HHHHHCCCCC
T ss_conf 9998099988
No 25
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=98.23 E-value=2.5e-05 Score=57.00 Aligned_cols=113 Identities=21% Similarity=0.163 Sum_probs=75.2
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHC-------------CCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHH
Q ss_conf 789999147725999999998718-------------9869999945787110689999999739807998200899999
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEK-------------GLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVR 72 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~-------------g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~ 72 (404)
..|.+.+|||||||+++..++... +.++.+|+++.-..+|.+.+++.|..+|.. |+.+.+..+-..
T Consensus 227 vpvg~~LSGGlDSSlIaal~~k~~~~~~~~~~~~~~~~~~~~tfsig~~~~~d~~~a~~vA~~l~~~-h~~v~~~~~~~~ 305 (553)
T 1ct9_A 227 VPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTV-HHEIHFTVQEGL 305 (553)
T ss_dssp SCEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEESTTCHHHHHHHHHHHHHTCE-EEEEECCHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC-CEEEECCHHHHH
T ss_conf 7514773699743999999998631455554443122566534883289997689999999981997-769983889999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHH-HHHHHHHHCCCCEEECHHHCCCCHHH
Q ss_conf 879999736865478742013012433599-99999885689287500111682156
Q gi|254780234|r 73 DFVFPMFRANALYEGYYLLGTAIARPLIAK-YLVDIANETGADAIAHGSTGKGNDQV 128 (404)
Q Consensus 73 ~~i~~~I~ana~Yeg~Ypl~tslaRplia~-~lv~~a~~~ga~~iaHG~TgkGNDQv 128 (404)
+.+...|.+... |..+. .+..++. .+.+.+++.|+.++.-| -|-|.+
T Consensus 306 ~~l~~~i~~~e~-----p~~~~-~~~~~~~~~l~k~~~~~~~kVvLsG---eGaDEl 353 (553)
T 1ct9_A 306 DAIRDVIYHIET-----YDVTT-IRASTPMYLMSRKIKAMGIKMVLSG---EGSDEV 353 (553)
T ss_dssp HHHHHHHHHHCC-----CCHHH-HHHHHHHHHHHHHHHHTTCCEEECC---TTHHHH
T ss_pred HHHHHHHHHHHC-----CCCCC-CCHHHHHHHHHHHHHHCCCEEEEEC---CCCCCC
T ss_conf 999999999746-----78543-3101005788999996698899968---875102
No 26
>1kqp_A NAD+ synthase;, NH(3)-dependent NAD(+) synthetase; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=98.23 E-value=1.7e-05 Score=58.13 Aligned_cols=154 Identities=14% Similarity=0.143 Sum_probs=91.0
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHH-------H-CCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHH---HHH
Q ss_conf 777899991477259999999987-------1-89869999945787110689999999739807998200899---999
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQV-------E-KGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRRE---FVR 72 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~-------e-~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~e---f~~ 72 (404)
..++|||+.|||+|||+++..++. + ....|+++..--+...+.++++..+..+|....+.+|..+- |.+
T Consensus 37 g~~~vVvGlSGGIDSav~A~L~~~a~~~~~~~~g~~~v~~v~mp~~~~~~~~da~~~~~~~~~~~~~~i~I~~~~~~~~~ 116 (271)
T 1kqp_A 37 GAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQQDEDDAQLALKFIKPDKSWKFDIKSTVSAFSD 116 (271)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSSSCTTHHHHHHHHHHHCCSEEEECCCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
T ss_conf 89819997988888999999999999988760688579998468767656999999998607665168640888867665
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCC-CEEEEEECCCC
Q ss_conf 87999973686547874201301243359999999885689287500111682156799999985879-70774410068
Q gi|254780234|r 73 DFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSD-IEIIAPWRHWS 151 (404)
Q Consensus 73 ~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~-l~viaP~Rd~~ 151 (404)
. ....+..+ .. ....+-.-+| +-...+..+|.+.|+-+++.| |--..+- .+.++.-| ..-++|+.+
T Consensus 117 ~-~~~~~~~~--~~-~~~~~NiqaR-iR~~~Ly~~An~~g~lvlgTg-----NksE~~~-Gy~TkyGD~~~di~Pi~~-- 183 (271)
T 1kqp_A 117 Q-YQQETGDQ--LT-DFNKGNVKAR-TRMIAQYAIGGQEGLLVLGTD-----HAAEAVT-GFFTKYGDGGADLLPLTG-- 183 (271)
T ss_dssp H-HHHHHSCC--CC-HHHHHHHHHH-HHHHHHHHHHHHHTCEEBCCC-----CHHHHTT-TCSCTTTTTCCSBCTTTT--
T ss_pred H-HHHHCCCC--CC-HHHHHCCCCH-HHHHHHHHHHHHCCCEEECCC-----CCCCCEE-EEEEECCCCCCCCCCCCC--
T ss_conf 3-11210234--32-1445254214-455899876643696698389-----7102010-016775878745132335--
Q ss_pred CCCHHHHHHHHHHHCCCCCC
Q ss_conf 76379999999970896756
Q gi|254780234|r 152 FKGRQDLIDFAEKHAIPIDK 171 (404)
Q Consensus 152 ~~sRe~~i~ya~~~gIpv~~ 171 (404)
+ ...+--+.|+..|||-..
T Consensus 184 L-~K~eV~~la~~lgiP~~i 202 (271)
T 1kqp_A 184 L-TKRQGRTLLKELGAPERL 202 (271)
T ss_dssp C-CHHHHHHHHHHTTCCTHH
T ss_pred C-CHHHHHHHHHHHCCCHHH
T ss_conf 7-789999999983998777
No 27
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=98.19 E-value=2.2e-05 Score=57.32 Aligned_cols=112 Identities=21% Similarity=0.245 Sum_probs=74.4
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCC
Q ss_conf 78999914772599999999871898699999457871106899999997398079982008999998799997368654
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANALY 85 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~Y 85 (404)
.+|.+..|||||||.++..++ +.+-.+.||++..-..+|.+.+++.|..+|. +|+++.+..+-..+.+...|.....+
T Consensus 239 ~pvg~~LSGGlDSSlIaala~-~~~~~i~tfs~g~~~~de~~~A~~vA~~lg~-~h~~~~~~~~d~~~~l~~~i~~~e~~ 316 (503)
T 1q15_A 239 DTVGIPLSGGLDSSLVTALAS-RHFKKLNTYSIGTELSNEFEFSQQVADALGT-HHQMKILSETEVINGIIESIYYNEIF 316 (503)
T ss_dssp SEEEEECCSSHHHHHHHHHHT-TTCSEEEEEEEEETTBCCHHHHHHHHHHHTC-EEEEEEECHHHHHHHHHHHHHHHCCC
T ss_pred CCEEEEECCCCCHHHHHHHHH-HHCCCEEEECCCCCCCCHHHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 856898058742799999987-5135301101577677657999999999499-17410576788988899987540478
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHH
Q ss_conf 7874201301243359999999885689287500111682156
Q gi|254780234|r 86 EGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQV 128 (404)
Q Consensus 86 eg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQv 128 (404)
+ |++...+-|+ -.+.+.|++ ++.++- ||-|-|.+
T Consensus 317 ~---~~~~~~~~~~--~~l~k~a~~-~~kV~L---sG~GaDEl 350 (503)
T 1q15_A 317 D---GLSAEIQSGL--FNVYRQAQG-QVSCML---TGYGSDLL 350 (503)
T ss_dssp C---HHHHHHHHHH--HHHHHHHBT-TBSEEE---CCTTHHHH
T ss_pred C---CCCHHHHHHH--HHHHHHHHH-CCEEEE---CCCCHHHH
T ss_conf 7---8614678899--999999762-561886---24674676
No 28
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=98.18 E-value=3.1e-06 Score=63.44 Aligned_cols=152 Identities=15% Similarity=0.188 Sum_probs=91.1
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCC
Q ss_conf 7899991477259999999987189869999945787--11068999999973980799820089999987999973686
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANA 83 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana 83 (404)
.|+++++|||.||+|++..+. +.+.++-.+++|+|- ++-++-+++-+...|. +..++.....+..... ..+-
T Consensus 45 ~~~~vs~S~GkDS~Vll~L~~-~~~~~~~vvf~DTg~~fpET~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~----~~~~ 118 (215)
T 1sur_A 45 GEYVLSSSFGIQAAVSLHLVN-QIRPDIPVILTDTGYLFPETYRFIDELTDKLKL-NLKVYRATESAAWQEA----RYGK 118 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHHH-HHSTTCEEEEEECSCBCHHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHH----HHCC
T ss_pred CCEEEEECCCHHHHHHHHHHH-HCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC-EEEEEECCCHHHHHHH----HCCC
T ss_conf 988999558757999999997-149995189963899989999999999998498-0599962411798886----5177
Q ss_pred CCCCCCCCCCCHHHHHHH---HHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH
Q ss_conf 547874201301243359---99999988568928750011168215679999998587970774410068763799999
Q gi|254780234|r 84 LYEGYYLLGTAIARPLIA---KYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQDLID 160 (404)
Q Consensus 84 ~Yeg~Ypl~tslaRplia---~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ 160 (404)
++ +.-.....+++-. .-+-+..++.+.+++.-|-.. ...--|-...+-....++-.+.|+-+| +.++..+
T Consensus 119 ~~---~~~~~~~~~~~~~~K~~p~~~~l~~~~~~~~i~G~R~-~es~~Ra~~~~~~~~~~~~ki~Pi~~W---t~~DVw~ 191 (215)
T 1sur_A 119 LW---EQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRR-EQSGSRANLPVLAIQRGVFKVLPIIDW---DNRTIYQ 191 (215)
T ss_dssp GG---GSHHHHHHHHHHHHTHHHHHHHHHHTTEEEEECCCCT-TSSSTTTTCCSEEEETTEEEECTTTTC---CHHHHHH
T ss_pred CC---CCCCCHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCC-CCCHHHHCCCCEEECCCEEEEECHHHC---CHHHHHH
T ss_conf 66---6784022331552314079999851586264156612-673346518745305997999572869---9999999
Q ss_pred HHHHHCCCCC
Q ss_conf 9997089675
Q gi|254780234|r 161 FAEKHAIPID 170 (404)
Q Consensus 161 ya~~~gIpv~ 170 (404)
|+++||||+.
T Consensus 192 Yi~~~~lp~n 201 (215)
T 1sur_A 192 YLQKHGLKYH 201 (215)
T ss_dssp HHHHHTCCCC
T ss_pred HHHHCCCCCC
T ss_conf 9998199988
No 29
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic acid, AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=98.18 E-value=1.1e-05 Score=59.52 Aligned_cols=111 Identities=16% Similarity=0.068 Sum_probs=76.7
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHH-HHHHHHHHHHHHHCCCC
Q ss_conf 78999914772599999999871898699999457871106899999997398079982008-99999879999736865
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLR-REFVRDFVFPMFRANAL 84 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r-~ef~~~~i~~~I~ana~ 84 (404)
.+|.+..|||||||.++..++ +.+..+.++++.....+|.+.+++.|..+|. +|+.+.+. ++|. +.+..+|.+.-.
T Consensus 242 ~~vg~~LSGGlDSSlIaala~-k~~~~~~t~s~~~~~~dE~~~A~~vA~~lg~-~h~~i~i~~~~~~-~~l~~~i~~~e~ 318 (513)
T 1jgt_A 242 DTPLVVLSGGIDSSGVAACAH-RAAGELDTVSMGTDTSNEFREARAVVDHLRT-RHREITIPTTELL-AQLPYAVWASES 318 (513)
T ss_dssp CCCEEECCSSHHHHHHHHHHH-HHHSSCEEEEEECSSCCCHHHHHHHHHHHTC-EEEEEECCHHHHH-TTHHHHHHHHCC
T ss_pred CCCEEECCCCCCHHHHHHHHH-HHCCCCCEEECCCCCCCHHHHHHHHHHCCCC-CCEEEECCHHHHH-HHHHHHHHHHHC
T ss_conf 887697789834499999876-4124432574245456526677764210102-5337861899999-999999998732
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHH
Q ss_conf 47874201301243359999999885689287500111682156
Q gi|254780234|r 85 YEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQV 128 (404)
Q Consensus 85 Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQv 128 (404)
++ |.. .+..+...++..+.+.|+.++- ||-|-|.+
T Consensus 319 ~~---p~~---~~~~~~~~~l~k~~~~~~kVvL---sG~GaDEl 353 (513)
T 1jgt_A 319 VD---PDI---IEYLLPLTALYRALDGPERRIL---TGYGADIP 353 (513)
T ss_dssp CC---HHH---HHHHHHHHHHHHHCCSSCCEEE---CCTTTHHH
T ss_pred CH---HCC---CCCHHHHHHHHHCCCCCEEEEE---EECCHHHH
T ss_conf 02---102---5410124443201355503999---85460564
No 30
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=98.15 E-value=3.7e-05 Score=55.72 Aligned_cols=154 Identities=18% Similarity=0.174 Sum_probs=86.4
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHH----------CCCEEEEEEEECCCCCHHHHHH-HHHHHCCCEEEEEECHHHHHHHH
Q ss_conf 778999914772599999999871----------8986999994578711068999-99997398079982008999998
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVE----------KGLEVIVFIADLGQGEELKIAS-DKARLLGAKEVYVKDLRREFVRD 73 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e----------~g~eVi~~~~d~Gq~~d~~~~~-~~A~~~Ga~~~~v~D~r~ef~~~ 73 (404)
.|+|||+.|||+||||++.+++.- .++.+++++.-.++..+..++. ..+...|. .+..+|.+..|. .
T Consensus 40 ~k~vVlGLSGGVDSaV~A~L~~~Alg~~~v~~~~~~~~~~~v~mP~~~~~~~~d~~~a~~~~~~~-~~~~i~i~~~~~-~ 117 (275)
T 1wxi_A 40 IKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQPD-RVLTVNIKGAVL-A 117 (275)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSSCTTHHHHHHHHHHHCCS-EEEECCCHHHHH-H
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC-CCCCCCHHHHHH-H
T ss_conf 88599978887889999999999999887631555531899978986764258999999863076-553157017899-9
Q ss_pred HHHHHHHC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCC-CEEEEEECCCC
Q ss_conf 79999736-86547874201301243359999999885689287500111682156799999985879-70774410068
Q gi|254780234|r 74 FVFPMFRA-NALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSD-IEIIAPWRHWS 151 (404)
Q Consensus 74 ~i~~~I~a-na~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~-l~viaP~Rd~~ 151 (404)
+ ...+.. +... ..+-++..-+|. -...+-.+|...|.-+++ .||.-..+ ..+.++.-| ..-++|+++
T Consensus 118 ~-~~~~~~~~~~~-~~~~~~N~~aR~-R~~~ly~~A~~~~~lVlg-----TgNksE~~-~Gy~Tk~GD~~~di~Pl~~-- 186 (275)
T 1wxi_A 118 S-EQALREAGIEL-SDFVRGNEKARE-RMKAQYSIAGMTSGVVVG-----TDHAAEAI-TGFFTKYGDGGTDINPLYR-- 186 (275)
T ss_dssp H-HHHHHHHTCCC-CHHHHHHHHHHH-HHHHHHHHHHHTTEEEBC-----CCCHHHHT-TTCSCTTTTTCCSBCTTTT--
T ss_pred H-HHHHHHCCCCC-CCCCCCCHHHHH-HHHHHHHHHHHCCCEEEC-----CCCHHHHH-CCCCCCCCCCCCCHHHHHC--
T ss_conf 9-98765206766-632012025788-999999998445987875-----88487775-2871336776521455732--
Q ss_pred CCCHHHHHHHHHHHCCCCCCC
Q ss_conf 763799999999708967566
Q gi|254780234|r 152 FKGRQDLIDFAEKHAIPIDKN 172 (404)
Q Consensus 152 ~~sRe~~i~ya~~~gIpv~~~ 172 (404)
+ ...+--+.++.-|||-..-
T Consensus 187 L-~K~eVr~La~~lgiP~~Ii 206 (275)
T 1wxi_A 187 L-NKRQGKQLLAALACPEHLY 206 (275)
T ss_dssp C-CHHHHHHHHHHTTCCGGGT
T ss_pred C-CHHHHHHHHHHCCCCHHHC
T ss_conf 7-7899999998659996762
No 31
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=97.97 E-value=1.7e-05 Score=58.13 Aligned_cols=152 Identities=16% Similarity=0.188 Sum_probs=89.4
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHH---CCCEEEEEEEECCC--CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHH
Q ss_conf 778999914772599999999871---89869999945787--1106899999997398079982008999998799997
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVE---KGLEVIVFIADLGQ--GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMF 79 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e---~g~eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I 79 (404)
-+++||+||||.||+|++.+.++- .+..+-.+++|+|- ++-++-+++-+...|.. .++.-..+.+++. ..|.
T Consensus 46 f~~~vv~fSGGKDStVlLhLa~ka~~~~~~p~pvl~iDTg~~FpETi~f~d~v~~~~gl~-l~v~~~~~~~~~g-~~~~- 122 (325)
T 1zun_A 46 FDNPVMLYSIGKDSAVMLHLARKAFFPGKLPFPVMHVDTRWKFQEMYRFRDQMVEEMGLD-LITHINPDGVAQG-INPF- 122 (325)
T ss_dssp CSSEEEECCSSHHHHHHHHHHHHHHTTSCCSSCEEEECCSCCCHHHHHHHHHHHHTTTCC-EEEECC-------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC-CEEECCCHHHHCC-CCCC-
T ss_conf 599799954758999999999997342489835899548986299999999999982997-2251480677617-7865-
Q ss_pred HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHH-----------HHCC---------
Q ss_conf 36865478742013012433599999998856892875001116821567999999-----------8587---------
Q gi|254780234|r 80 RANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAY-----------SLNS--------- 139 (404)
Q Consensus 80 ~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~-----------~l~P--------- 139 (404)
..+.. .-.+.+....+.+...+.+.+++..|.-.........+..+. .-.|
T Consensus 123 -----~~~~~----~~~~~~K~~pl~~al~~~~~d~~i~G~RrdEs~~Rak~~~~s~r~~~~~~~~~~q~pe~w~~~~~~ 193 (325)
T 1zun_A 123 -----THGSA----KHTDIMKTEGLKQALDKHGFDAAFGGARRDEEKSRAKERVYSFRDSKHRWDPKNQRPELWNVYNGN 193 (325)
T ss_dssp --------CC----HHHHHHTHHHHHHHHHHHTCSEEECCCCTTSSGGGGGCCSEEEECTTCCBCGGGCCCCCSSCCCCC
T ss_pred -----CCCHH----HHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHCCCC
T ss_conf -----57868----864788778899999860876388424354433430263101002355455100586666521575
Q ss_pred ----CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf ----97077441006876379999999970896756
Q gi|254780234|r 140 ----DIEIIAPWRHWSFKGRQDLIDFAEKHAIPIDK 171 (404)
Q Consensus 140 ----~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~~ 171 (404)
+.-.+.|+-+| +..+-.+|.++++||+.-
T Consensus 194 ~~~~~~vrv~PI~dW---Te~DVW~YI~~~~Ip~np 226 (325)
T 1zun_A 194 VNKGESIRVFPLSNW---TELDIWQYIYLEGIPIVP 226 (325)
T ss_dssp CCTTCEEEECTTTTC---CHHHHHHHHHHHTCCCCS
T ss_pred CCCCCEEEEECCCCC---CHHHHHHHHHHHCCCCCC
T ss_conf 688875577255468---899999999981999886
No 32
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=97.86 E-value=2.7e-05 Score=56.78 Aligned_cols=149 Identities=13% Similarity=0.178 Sum_probs=88.3
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCC
Q ss_conf 7899991477259999999987189869999945787--11068999999973980799820089999987999973686
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANA 83 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana 83 (404)
++|+++||||-| ||++.++. +.+-+|-.+.+|.|- +|-++-+++-+..+|.. ..++.....+.+..+... ...
T Consensus 55 ~~i~vSfSGGKD-sVlL~L~~-~~~~~i~Vvf~DTG~efpET~~~~~~~~~~~~l~-i~v~~~~~~~~e~~~~~~-~~~- 129 (275)
T 2goy_A 55 DELWISFSGAED-VVLVDMAW-KLNRNVKVFSLDTGRLHPETYRFIDQVREHYGIA-IDVLSPDPRLLEPLVKEK-GLF- 129 (275)
T ss_dssp TTEEEECCSSTT-HHHHHHHH-HHCTTCCEEEECCSCCCHHHHHHHHHHHHHHTCC-CEEECCCHHHHHHHHHHH-CSC-
T ss_pred CCEEEECCCHHH-HHHHHHHH-HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCC-EEEEECCHHHHHHHHHHC-CCC-
T ss_conf 988998158699-99999999-8589971898358999899999999999984997-389937858999999866-875-
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEECHHHCCCCHHH--H------H--HHHHHHHCCCCEEEEEECCCCC
Q ss_conf 5478742013012433599999998856-89287500111682156--7------9--9999985879707744100687
Q gi|254780234|r 84 LYEGYYLLGTAIARPLIAKYLVDIANET-GADAIAHGSTGKGNDQV--R------F--ELSAYSLNSDIEIIAPWRHWSF 152 (404)
Q Consensus 84 ~Yeg~Ypl~tslaRplia~~lv~~a~~~-ga~~iaHG~TgkGNDQv--R------F--e~~~~~l~P~l~viaP~Rd~~~ 152 (404)
.+-.....+.+-..++....+.+ +.+++.-| .--+|- | + +..+....+.+-.+.|+-+|
T Consensus 130 -----~~~~~~~~~Cc~~~Kv~Pl~ral~~~~~witG---~Rr~es~~r~~~~~~~~~d~~~~~~~~~~~k~~PI~dW-- 199 (275)
T 2goy_A 130 -----SFYRDGHGECCGIRKIEPLKRKLAGVRAWATG---QRRDQSPGTRSQVAVLEIDGAFSTPEKPLYKFNPLSSM-- 199 (275)
T ss_dssp -----HHHHHCTHHHHHHHTHHHHHHHHHTCSEEECC---CCGGGTTSCSCCCCSEEECTTTCCSSSCCEEECTTTTC--
T ss_pred -----CCCCCCHHHHHHHHHHCCHHHHHHCCCEEEEC---CCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCHHCC--
T ss_conf -----43434668886555106256664202314405---65046766534673268606667766660588122018--
Q ss_pred CCHHHHHHHHHHHCCCCC
Q ss_conf 637999999997089675
Q gi|254780234|r 153 KGRQDLIDFAEKHAIPID 170 (404)
Q Consensus 153 ~sRe~~i~ya~~~gIpv~ 170 (404)
+.++...|+++||||+.
T Consensus 200 -t~~DVw~Yi~~~~lp~n 216 (275)
T 2goy_A 200 -TSEEVWGYIRMLELPYN 216 (275)
T ss_dssp -CHHHHHHHHHHTTCCCC
T ss_pred -CHHHHHHHHHHCCCCCC
T ss_conf -99999999998199988
No 33
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii OT3} SCOP: c.26.2.6 d.308.1.1
Probab=97.68 E-value=0.0007 Score=46.59 Aligned_cols=127 Identities=14% Similarity=0.183 Sum_probs=80.5
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCC
Q ss_conf 78999914772599999999871898699999457871106899999997398079982008999998799997368654
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANALY 85 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~Y 85 (404)
.|+++.+|||. |.|+ .||....|++|+.++.+.+ ++..+.+++-+..+ . .|
T Consensus 180 Gk~l~LlSGGi-SpVA-a~~~mKRG~~v~~v~f~~~-~~~~~kv~~l~~~l---------------~-----------~~ 230 (307)
T 1vbk_A 180 GRMIGILHDEL-SALA-IFLMMKRGVEVIPVYIGKD-DKNLEKVRSLWNLL---------------K-----------RY 230 (307)
T ss_dssp CEEEEECSSHH-HHHH-HHHHHHBTCEEEEEEESCS-SHHHHHHHHHHHHH---------------H-----------TT
T ss_pred CCEEEEECCCC-CHHH-HHHHHHCCCEEEEEEECCC-HHHHHHHHHHHHHH---------------H-----------HH
T ss_conf 83589833773-0999-9999966988999996897-88999999999999---------------9-----------75
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECH-HHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 7874201301243359999999885689287500-111682156799999985879707744100687637999999997
Q gi|254780234|r 86 EGYYLLGTAIARPLIAKYLVDIANETGADAIAHG-STGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQDLIDFAEK 164 (404)
Q Consensus 86 eg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG-~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ya~~ 164 (404)
.+.+-+-.-..++ -..++++|++.||.++..| |.|--..|. .++..-.-+-++.|+-|.- .|. -+|-|+.|++
T Consensus 231 ~~~~~~~~~~~~~--~~~~~~ia~~~~~~~ivtGeslgQVaSQt-~n~~~~~~~~~~pi~RPLi--g~D-K~EIi~~Ar~ 304 (307)
T 1vbk_A 231 SYGSKGFLVVAES--FDRVLKLIRDFGVKGVIKGLRPNDLNSEV-SEITEDFKMFPVPVYYPLI--ALP-EEYIKSVKER 304 (307)
T ss_dssp CTTSCCCCEEESS--HHHHHHHHHHHTCCEEECCCCGGGCCTTC-HHHHHHHHHCSSCEECHHH--HSC-HHHHHHHHHH
T ss_pred CCCCCEEEEECCC--HHHHHHHHHHCCCCEEEECCCHHHHHHHH-HHHHHHHHCCCCCCCCCCC--CCC-HHHHHHHHHH
T ss_conf 8998479997676--89999999984998999351525889999-9899998415987024837--899-8999999998
Q ss_pred HCC
Q ss_conf 089
Q gi|254780234|r 165 HAI 167 (404)
Q Consensus 165 ~gI 167 (404)
=|+
T Consensus 305 IGl 307 (307)
T 1vbk_A 305 LGL 307 (307)
T ss_dssp HTC
T ss_pred HCC
T ss_conf 686
No 34
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=97.19 E-value=0.0016 Score=44.01 Aligned_cols=144 Identities=17% Similarity=0.185 Sum_probs=85.3
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCC-EEEEEEEECC-C-CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 7778999914772599999999871898-6999994578-7-11068999999973980799820089999987999973
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGL-EVIVFIADLG-Q-GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFR 80 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~-eVi~~~~d~G-q-~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ 80 (404)
..++|||.-|||+||++++....+--|. .|+++++-.- + .+..+++++-|..+|. .+.+++..+-+ +.+. ..+.
T Consensus 325 g~~~~v~glSGGiDSal~a~la~~alg~~~v~~~~mP~~~ss~~t~~~a~~l~~~lg~-~~~~~~i~~~~-~~~~-~~~~ 401 (590)
T 3n05_A 325 GFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGL-NFRTVSIEPMF-DAYM-ASLG 401 (590)
T ss_dssp TCCCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCSSCCHHHHHHHHHHHHHHTC-EEEECCSHHHH-HHHH-HHHC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCC-CCCCEECHHHH-HHHH-HHCC
T ss_conf 9986999637993289999999985188651135468666740209999999997199-73214317999-9998-6213
Q ss_pred CC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCC-CEEEEEECCCCCCCHHHH
Q ss_conf 68-6547874201301243359999999885689287500111682156799999985879-707744100687637999
Q gi|254780234|r 81 AN-ALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSD-IEIIAPWRHWSFKGRQDL 158 (404)
Q Consensus 81 an-a~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~-l~viaP~Rd~~~~sRe~~ 158 (404)
.. ..+| +..|-.|- -.+..+|.+.|+=++..| |.-.-. +.+.++.-| ..-++|+-|..-+--.++
T Consensus 402 ~~~~~~e----N~qar~R~---~~l~~~a~~~~~lvl~t~-----n~sE~a-lG~~t~~gd~~~~~~p~~~l~Kt~v~~l 468 (590)
T 3n05_A 402 LTGLAEE----NLQSRLRG---TTLMAISNQEGHIVLAPG-----NKSELA-VGYSTLYGDSVGAYGPIKDVYKTSIFRL 468 (590)
T ss_dssp CCTHHHH----HHHHHHHH---HHHHHHHHHHTCEEBCCC-----CHHHHH-HTCCCSSCTTSCSBCTTTTSCHHHHHHH
T ss_pred CCCHHHH----HHHHHHHH---HHHHHHHHHCCCEEECCC-----CHHHHH-HCCCEECCCCCCCCEECCCCCHHHHHHH
T ss_conf 3413567----77887748---999998714693796378-----674676-3751113677632000378539999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780234|r 159 IDFAE 163 (404)
Q Consensus 159 i~ya~ 163 (404)
..|..
T Consensus 469 ~~~~~ 473 (590)
T 3n05_A 469 AEWRN 473 (590)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99985
No 35
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=97.09 E-value=0.00054 Score=47.43 Aligned_cols=149 Identities=15% Similarity=0.183 Sum_probs=83.3
Q ss_pred CEEEEEECCCHHHHHHHHHHHHH-CCC-EEEEEEEECCC--CCHHHHHHHHHHHCCCE-----EEEEECH---HHHHHHH
Q ss_conf 78999914772599999999871-898-69999945787--11068999999973980-----7998200---8999998
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVE-KGL-EVIVFIADLGQ--GEELKIASDKARLLGAK-----EVYVKDL---RREFVRD 73 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e-~g~-eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~-----~~~v~D~---r~ef~~~ 73 (404)
.++++++|+|.||.|+++.+..- .+. .+-.|.+|+|- ++-++.+++-+...|.. ..+..+. ..++...
T Consensus 42 ~~~~~~~SfGkdS~VlLhL~~~v~~~~~~~~VvfiDTG~efpET~e~ve~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (261)
T 2oq2_A 42 PHLFQTTAFGLTGLVTIDMLSKLSEKYYMPELLFIDTLHHFPQTLTLKNEIEKKYYQPKNQTIHVYKPDGCESEADFASK 121 (261)
T ss_dssp SSEEEECCCCHHHHHHHHHHHHHTTTSCCCEEEEECCSCBCHHHHHHHHHHHHHHTGGGTCCCEEECSTTCSSHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHH
T ss_conf 99189986878899999999985666788867995599988999999999999958654434314457556679999861
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHH---HHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHH--HCCCCEEEEEEC
Q ss_conf 7999973686547874201301243359---99999988568928750011168215679999998--587970774410
Q gi|254780234|r 74 FVFPMFRANALYEGYYLLGTAIARPLIA---KYLVDIANETGADAIAHGSTGKGNDQVRFELSAYS--LNSDIEIIAPWR 148 (404)
Q Consensus 74 ~i~~~I~ana~Yeg~Ypl~tslaRplia---~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~--l~P~l~viaP~R 148 (404)
+ ...+| .....|.+-. .-+-+..++.+.+++.-|- .+....-|-...+.. -.+.+-.+.|+-
T Consensus 122 ~------~~~~~------~~~~~~cc~~~Kv~Pl~r~l~~~~~~~~i~Gi-R~~es~~R~~~~~~~~~~~~~~~~v~Pi~ 188 (261)
T 2oq2_A 122 Y------GDFLW------EKDDDKYDYLAKVEPAHRAYKELHISAVFTGR-RKSQGSARSQLSIIEIDELNGILKINPLI 188 (261)
T ss_dssp H------CTTHH------HHCHHHHHHHHTHHHHHHHHHHTTCSEEECCC-CGGGCGGGGGCCSEEEETTTTEEEECTTT
T ss_pred C------CCCCC------CCCHHHHHHHHHCCHHHHHHHHCCCCEEEECC-CCCCCCCCCCCCCEEECCCCCCEEECHHH
T ss_conf 4------87644------46889876676105478999851887477510-20461313357510143789944662344
Q ss_pred CCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 0687637999999997089675
Q gi|254780234|r 149 HWSFKGRQDLIDFAEKHAIPID 170 (404)
Q Consensus 149 d~~~~sRe~~i~ya~~~gIpv~ 170 (404)
+| +.++..+|+.+||||+.
T Consensus 189 ~W---t~~dVw~Yi~~~~lp~n 207 (261)
T 2oq2_A 189 NW---TFEQVKQYIDANNVPYN 207 (261)
T ss_dssp TC---CHHHHHHHHHHHTCCCC
T ss_pred CC---CHHHHHHHHHHCCCCCC
T ss_conf 09---99999999998399988
No 36
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.015 Score=37.07 Aligned_cols=131 Identities=15% Similarity=0.174 Sum_probs=70.9
Q ss_pred CEEEEEECCCHHHHHHHHHHHHH---------------------CCCEEEEEEEECCCC--CHHHHHHHHHHHCCCEEEE
Q ss_conf 78999914772599999999871---------------------898699999457871--1068999999973980799
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVE---------------------KGLEVIVFIADLGQG--EELKIASDKARLLGAKEVY 62 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e---------------------~g~eVi~~~~d~Gq~--~d~~~~~~~A~~~Ga~~~~ 62 (404)
..|+++||||-||+|++.+...- .--.+.++.+|.|.+ +-.+-+.+-+...|. +.+
T Consensus 54 ~ei~~SFSGGKDStVlL~L~~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~yidt~~~FpE~~~fv~~~~~~~~l-~~~ 132 (306)
T 2wsi_A 54 GEISFSYNGGKDCQVLLLLYLSCLWEYFFIKAQNSQFDFEFQSFPMQRLPTVFIDQEETFPTLENFVLETSERYCL-SLY 132 (306)
T ss_dssp SSEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCCEEEEECCCTTCCHHHHHHHHHHHHHTTE-EEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC-EEE
T ss_conf 7489981583379999999999853134421245555654344557887579947999987899999999997294-599
Q ss_pred EECHHHH---HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCH----HHHHHHHHH
Q ss_conf 8200899---999879999736865478742013012433599999998856892875001116821----567999999
Q gi|254780234|r 63 VKDLRRE---FVRDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGND----QVRFELSAY 135 (404)
Q Consensus 63 v~D~r~e---f~~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGND----QvRFe~~~~ 135 (404)
+...... +..+.+...++.+ | +.+++--|. -+.-- +.-|...-
T Consensus 133 ~~~~~~~~~~~~~~~~~~~lk~~-------p---------------------~~~aii~G~-R~~Es~~R~~~~~~~~d- 182 (306)
T 2wsi_A 133 ESQRQSGASVNMADAFRDFIKIY-------P---------------------ETEAIVIGI-RHTDPFGEALKPIQRTD- 182 (306)
T ss_dssp ECCC-----CCHHHHHHHHHHHC-------T---------------------TCCEEECCC-CCCSSSCCCCCSEEECC-
T ss_pred EEECCCCHHHHHHHHHHHHHHHC-------C---------------------CCCEEEECC-CCCCCCHHCCCCCCCCC-
T ss_conf 98378437777568889999849-------9---------------------986899624-04675400158500205-
Q ss_pred HHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 85879707744100687637999999997089675
Q gi|254780234|r 136 SLNSDIEIIAPWRHWSFKGRQDLIDFAEKHAIPID 170 (404)
Q Consensus 136 ~l~P~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~ 170 (404)
.-.|+.-.+.|+.||. ..+-..|+.+++||+.
T Consensus 183 ~~~p~~~rv~PI~dWt---~~DVW~yi~~~~lpy~ 214 (306)
T 2wsi_A 183 SNWPDFMRLQPLLHWD---LTNIWSFLLYSNEPIC 214 (306)
T ss_dssp TTSCSCEEECTTTTCC---HHHHHHHHHHHCCCBC
T ss_pred CCCCCEEEECCHHHCC---HHHHHHHHHHCCCCCC
T ss_conf 9988638982236399---9999999997299988
No 37
>3dla_A Glutamine-dependent NAD(+) synthetase; glutaminase, ammonia tunneling, enzyme, glutamine-amido transferase, ATP-binding, ligase; HET: NXX ONL; 2.35A {Mycobacterium tuberculosis}
Probab=96.55 E-value=0.0056 Score=40.13 Aligned_cols=151 Identities=20% Similarity=0.115 Sum_probs=83.7
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCC------CEEEEEEEECCC--CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHH
Q ss_conf 777899991477259999999987189------869999945787--110689999999739807998200899999879
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKG------LEVIVFIADLGQ--GEELKIASDKARLLGAKEVYVKDLRREFVRDFV 75 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g------~eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i 75 (404)
..++|+|+.|||+||++++.....--| -.|+++++-.-. .+..+++++-|..+|+ .++.++..+.+ +.+.
T Consensus 360 g~~~~vlglSGGiDSal~a~la~~a~~~~~~~~~~v~~~~mps~~ss~~s~~~A~~la~~lg~-~~~~i~I~~~~-~~~~ 437 (680)
T 3dla_A 360 DYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGV-TFSEIDIGDTA-RLML 437 (680)
T ss_dssp TSCEEEEECCSSHHHHHHHHHHHHHHHHTTCCGGGEEEEECCC-----CTHHHHHHHHHHHTC-EEEECCCHHHH-HHHH
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC-CCCCCCHHHHH-HHHH
T ss_conf 987255223357531788999999763204775444898326444650339999988875498-64445579999-9999
Q ss_pred HHHHHCCCCCCCCCCCCCC----HHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHH--CCCCEEEEEECC
Q ss_conf 9997368654787420130----1243359999999885689287500111682156799999985--879707744100
Q gi|254780234|r 76 FPMFRANALYEGYYLLGTA----IARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSL--NSDIEIIAPWRH 149 (404)
Q Consensus 76 ~~~I~ana~Yeg~Ypl~ts----laRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l--~P~l~viaP~Rd 149 (404)
..|... .-.|.-.-..+ -||.= ...+..+|++.|.=++.. ||--.-.=. +.++ +-...-++|+-+
T Consensus 438 -~~~~~~-~~~~~~~~~~~~eN~qaR~R-~~~l~~~an~~~~lvl~t-----~N~sE~~~G-y~Tl~yGD~~~~~~pi~~ 508 (680)
T 3dla_A 438 -HTIGHP-YSVGEKVYDVTFENVQAGLR-TDYLFRIANQRGGIVLGT-----GDLSELALG-WSTYGVGDQMSHYNVNAG 508 (680)
T ss_dssp -HHTTC----------CCHHHHHHHHHH-HHHHHHHHHHHTEEEEEC-----CCHHHHHHT-CSCCSSSTTCCSEESSTT
T ss_pred -HHHHHH-HCCCCCCCCHHHHHHHHHHH-HHHHHHHHCCCCEEEECC-----CCCCHHHHC-CEECCCCCCCCCCCEECC
T ss_conf -986434-21787544146651104788-999998641278189778-----961036535-310045886757461179
Q ss_pred CCCCCHHHHHHHHHHH
Q ss_conf 6876379999999970
Q gi|254780234|r 150 WSFKGRQDLIDFAEKH 165 (404)
Q Consensus 150 ~~~~sRe~~i~ya~~~ 165 (404)
..-+---+...|+.++
T Consensus 509 l~Kt~v~~l~~~~n~~ 524 (680)
T 3dla_A 509 VPKTLIQHLIRWVISA 524 (680)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
T ss_conf 5599999999999765
No 38
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A*
Probab=96.28 E-value=0.0002 Score=50.51 Aligned_cols=29 Identities=24% Similarity=0.424 Sum_probs=23.7
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 79707744100687637999999997089675
Q gi|254780234|r 139 SDIEIIAPWRHWSFKGRQDLIDFAEKHAIPID 170 (404)
Q Consensus 139 P~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~ 170 (404)
|+.-.+.|+.||. .++-..|..+++||+.
T Consensus 189 p~~~rv~PI~dWt---~~DVW~Yi~~~~lpy~ 217 (308)
T 3fwk_A 189 PDFYRLQPLLHWN---LANIWSFLLYSNEPIC 217 (308)
T ss_dssp CSCEEECTTTTCC---HHHHHHHHHHHTCCCC
T ss_pred CCEEEEEEHHHCC---HHHHHHHHHHCCCCCC
T ss_conf 8728982036489---9999999998499987
No 39
>1xw8_A UPF0271 protein YBGL; NESG, northeast structural genomics consortium, structural genomics, protein structure initiative, PSI, X-RAY; 2.00A {Escherichia coli} SCOP: c.6.2.5
Probab=91.48 E-value=0.14 Score=30.02 Aligned_cols=147 Identities=15% Similarity=0.178 Sum_probs=98.1
Q ss_pred HHHHHHHHHCCCCEE---ECHHHC--CCCHHHH---HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 999999885689287---500111--6821567---99999985879707744100687637999999997089675665
Q gi|254780234|r 102 KYLVDIANETGADAI---AHGSTG--KGNDQVR---FELSAYSLNSDIEIIAPWRHWSFKGRQDLIDFAEKHAIPIDKNK 173 (404)
Q Consensus 102 ~~lv~~a~~~ga~~i---aHG~Tg--kGNDQvR---Fe~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~~~~ 173 (404)
..+..+|+..|...- .||+-. .-+|+-= +=.+++.++|++.+++|. -.+....|+++|+++-..-
T Consensus 87 ~al~~~a~~~g~~l~hVKpHGALYn~a~~d~~lA~~i~~ai~~~~~~l~l~~~~-------~s~~~~~A~~~Gl~~~~E~ 159 (252)
T 1xw8_A 87 GALATIARAQGGVMRHVKPHGMLYNQAAKEAQLADAIARAVYACDPALILVGLA-------GSELIRAGKQYGLTTREEV 159 (252)
T ss_dssp HHHHHHHHHTTCCEEEECCCHHHHHHHTTCHHHHHHHHHHHHHHCTTCEEEEET-------TSHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHCCCCCCEECCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCC-------CCHHHHHHHHCCCCEEEEE
T ss_conf 999999998499631025036999875137999999999999859415442488-------7499999987599779999
Q ss_pred CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCC-HHHCCCCCEEEEEEEECCEEEEECCEECCHHHHHHHHHHH
Q ss_conf 678864157243115457632458457682010014658-1227999638999995024787516231899999999888
Q gi|254780234|r 174 RGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVS-PEEAPDTPTTIRIDFQRGDPIAINGQVMSPEVLLEQLNQY 252 (404)
Q Consensus 174 ~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~-p~~ap~~pe~v~I~Fe~G~PVainG~~~~~~~li~~LN~i 252 (404)
=.++.|--|-+|.-|+.++..+.||.... +-+..+... .-.+ -.-+.|.|.++ -+-|-|..-..+++++.+.+.
T Consensus 160 FADR~Y~~dG~LvpR~~~gAvi~d~~~~~-~qv~~~~~~g~V~t-i~G~~i~i~ad---TICvHgDtp~Av~~a~~ir~~ 234 (252)
T 1xw8_A 160 FADRGYQADGSLVPRSQSGALIENEEQAL-AQTLEMVQHGRVKS-ITGEWATVAAQ---TVCLHGDGEHALAFARRLRSA 234 (252)
T ss_dssp CTTSCBCTTSSBCCTTTCC-----CTTHH-HHHHHHHHHSEEEC-TTSCEEECCCC---EEECCCCC-CCHHHHHHHHHH
T ss_pred EECCCCCCCCCEEECCCCCCCCCCHHHHH-HHHHHHHHCCCEEC-CCCCEECCCCC---EEEECCCCHHHHHHHHHHHHH
T ss_conf 86265789999886247787548999999-99999997798786-78998017888---799899987899999999999
Q ss_pred HHHCCCCC
Q ss_conf 64216374
Q gi|254780234|r 253 GRCNGIGR 260 (404)
Q Consensus 253 gg~~GvGr 260 (404)
-.++||-.
T Consensus 235 L~~~gi~I 242 (252)
T 1xw8_A 235 FAEKGIVV 242 (252)
T ss_dssp C----CCB
T ss_pred HHHCCCEE
T ss_conf 99889989
No 40
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=91.08 E-value=0.85 Score=24.46 Aligned_cols=65 Identities=15% Similarity=0.108 Sum_probs=45.7
Q ss_pred CCCCCEEEEEECCCHHHHHHHHHHHH---HCCCEEEEEEEECCCCC-----------------HHHHHHHHHHHCCCEEE
Q ss_conf 87777899991477259999999987---18986999994578711-----------------06899999997398079
Q gi|254780234|r 2 SRDVKKVVLAYSGGLDTSIILKWLQV---EKGLEVIVFIADLGQGE-----------------ELKIASDKARLLGAKEV 61 (404)
Q Consensus 2 ~~~~kkVvlaySGGLDTSv~i~~L~~---e~g~eVi~~~~d~Gq~~-----------------d~~~~~~~A~~~Ga~~~ 61 (404)
++ .=||+|+.+||.-||..+.-+++ ++|.++.--.+..++-+ -.+++++.+...|+ ++
T Consensus 4 ~k-~~kIlL~C~~GmSSsll~~km~~~a~~~~~~~~v~A~~~~~~~~~~~~~DviLL~PQv~~~~~~i~~~~~~~~i-pv 81 (108)
T 3nbm_A 4 SK-ELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGI-QI 81 (108)
T ss_dssp -C-CEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTC-EE
T ss_pred CC-CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCC-CE
T ss_conf 76-34699997999759999999999999769978999953899998864289999866799999999999877399-28
Q ss_pred EEECHHH
Q ss_conf 9820089
Q gi|254780234|r 62 YVKDLRR 68 (404)
Q Consensus 62 ~v~D~r~ 68 (404)
.++|..+
T Consensus 82 ~~I~~~~ 88 (108)
T 3nbm_A 82 VATRGME 88 (108)
T ss_dssp EECCHHH
T ss_pred EEECHHH
T ss_conf 8728787
No 41
>2dfa_A Hypothetical UPF0271 protein TTHB195; lactam utilization protein, structural genomics, NPPSFA; 1.90A {Thermus thermophilus HB8} SCOP: c.6.2.5
Probab=88.84 E-value=0.44 Score=26.51 Aligned_cols=146 Identities=14% Similarity=0.162 Sum_probs=96.0
Q ss_pred HHHHHHHHHCCCCE---EECHHHC--CCCHHHH---HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999988568928---7500111--6821567---99999985879707744100687637999999997089675665
Q gi|254780234|r 102 KYLVDIANETGADA---IAHGSTG--KGNDQVR---FELSAYSLNSDIEIIAPWRHWSFKGRQDLIDFAEKHAIPIDKNK 173 (404)
Q Consensus 102 ~~lv~~a~~~ga~~---iaHG~Tg--kGNDQvR---Fe~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~~~~ 173 (404)
..+..+++..|+.. =.||+-+ .-+|..= +=.+++.++|++.++.|. -....+.++++|+++-..-
T Consensus 92 ~al~~~a~~~g~~l~hVKpHGALYn~~~~d~~la~ai~~ai~~~~~~l~l~~~~-------~s~~~~~A~~~Gl~~~~E~ 164 (250)
T 2dfa_A 92 GALSAFLKAEGLPLHHVKPHGALYLKACRDRETARAIALAVKAFDPGLPLVVLP-------GTVYEEEARKAGLRVVLEA 164 (250)
T ss_dssp HHHHHHHHHTTCCCCCBCCCHHHHHHHHHCHHHHHHHHHHHHHHCTTCCEEECT-------TSHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC-------CCHHHHHHHHCCCCEEEEE
T ss_conf 999999998199752205027899999865999999999999859986799837-------8478999998699668999
Q ss_pred CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCC-HHHCCCCCEEEEEEEECCEEEEECCEECCHHHHHHHHHHH
Q ss_conf 678864157243115457632458457682010014658-1227999638999995024787516231899999999888
Q gi|254780234|r 174 RGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVS-PEEAPDTPTTIRIDFQRGDPIAINGQVMSPEVLLEQLNQY 252 (404)
Q Consensus 174 ~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~-p~~ap~~pe~v~I~Fe~G~PVainG~~~~~~~li~~LN~i 252 (404)
=.++.|--|-.|.-|+..+..+.||..- -+-+..+... .-.+ ..-+.|.+.++ -+-|-|..-..+++++.+.+.
T Consensus 165 FADR~Y~~dG~Lv~R~~~gAvi~d~~~~-~~qv~~~~~~g~V~t-~~G~~i~i~ad---TiCvHgDtp~Av~~a~~ir~~ 239 (250)
T 2dfa_A 165 FPERAYLRSGQLAPRSMPGSWITDPEEA-ARRALRMVLEGKVEA-LDGGEVAVRAD---TLCIHGDNPNAPEVARAVREA 239 (250)
T ss_dssp CTTBCBCTTSSBCCTTSTTCBCCCHHHH-HHHHHHHHHTSEEEB-TTSSEEECCCS---EEEEC---CCHHHHHHHHHHH
T ss_pred EECCCCCCCCCEEEECCCCCCCCCHHHH-HHHHHHHHHCCCEEE-CCCCEEECCCC---EEEECCCCHHHHHHHHHHHHH
T ss_conf 7326688999888632652201687999-999999997798891-68988743578---899899987899999999999
Q ss_pred HHHCCCC
Q ss_conf 6421637
Q gi|254780234|r 253 GRCNGIG 259 (404)
Q Consensus 253 gg~~GvG 259 (404)
--++||-
T Consensus 240 L~~~gi~ 246 (250)
T 2dfa_A 240 LEQAGVE 246 (250)
T ss_dssp HHTTTCE
T ss_pred HHHCCCE
T ss_conf 9988797
No 42
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=87.73 E-value=0.88 Score=24.34 Aligned_cols=61 Identities=15% Similarity=0.290 Sum_probs=42.6
Q ss_pred EEEEEECCCHHHHHHHHHHHH---HCCC--EEEEEEEE-------------CC-CCC-HHHHHHHHHHHCCCEEEEEECH
Q ss_conf 899991477259999999987---1898--69999945-------------78-711-0689999999739807998200
Q gi|254780234|r 7 KVVLAYSGGLDTSIILKWLQV---EKGL--EVIVFIAD-------------LG-QGE-ELKIASDKARLLGAKEVYVKDL 66 (404)
Q Consensus 7 kVvlaySGGLDTSv~i~~L~~---e~g~--eVi~~~~d-------------~G-q~~-d~~~~~~~A~~~Ga~~~~v~D~ 66 (404)
||+|+.+||.-||..+.-+++ ++|. +|.++... +| |-. ..+.+++.+...|. ++.++|-
T Consensus 6 kIlL~C~~G~STsllv~km~~~a~~~~~~~~I~A~~~~~~~~~~~~~DviLL~PQv~y~~~~i~~~~~~~~i-pV~~I~~ 84 (109)
T 2l2q_A 6 NILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIAETRLSEVVDRFDVVLLAPQSRFNKKRLEEITKPKGI-PIEIINT 84 (109)
T ss_dssp EEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEECSTTHHHHTTTCSEEEECSCCSSHHHHHHHHHHHHTC-CEEECCH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCC-CEEEECH
T ss_conf 898887897579999999999999869977999976899986622998999997388889999998415798-2999785
Q ss_pred HH
Q ss_conf 89
Q gi|254780234|r 67 RR 68 (404)
Q Consensus 67 r~ 68 (404)
++
T Consensus 85 ~~ 86 (109)
T 2l2q_A 85 ID 86 (109)
T ss_dssp HH
T ss_pred HH
T ss_conf 75
No 43
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 3hb9_A*
Probab=87.46 E-value=1.1 Score=23.58 Aligned_cols=131 Identities=19% Similarity=0.244 Sum_probs=71.8
Q ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHH-HCCCEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 87777899991477259999999987189869999945787110689999999-73980799820089999987999973
Q gi|254780234|r 2 SRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKAR-LLGAKEVYVKDLRREFVRDFVFPMFR 80 (404)
Q Consensus 2 ~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~-~~Ga~~~~v~D~r~ef~~~~i~~~I~ 80 (404)
|+.+|||.+|=.|=.-.-+ +.-+| +-|+++|++..|--. + +. ..=|.+.|.++.....+
T Consensus 1 m~~~~~~lianrg~ia~r~-~r~~~-~~g~~~v~v~s~~d~--~-------~~~~~~ad~~~~~~~~~~~~--------- 60 (1150)
T 3hbl_A 1 MKQIKKLLVANRGEIAIRI-FRAAA-ELDISTVAIYSNEDK--S-------SLHRYKADESYLVGSDLGPA--------- 60 (1150)
T ss_dssp --CCCEEEECCCHHHHHHH-HHHHH-HTTCEEEEEECGGGT--T-------CGGGGTSSEEEECCTTSCTT---------
T ss_pred CCCCCEEEEECCCHHHHHH-HHHHH-HCCCEEEEECCHHHH--C-------CCCHHHCCEEEECCCCCCHH---------
T ss_conf 9978889998971999999-99999-869939998184784--6-------88978878889828988633---------
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECC--CCCCCHHHH
Q ss_conf 686547874201301243359999999885689287500111682156799999985879707744100--687637999
Q gi|254780234|r 81 ANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRH--WSFKGRQDL 158 (404)
Q Consensus 81 ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd--~~~~sRe~~ 158 (404)
.-++-...++++|++.||++|--|- |=-+-...|=..+... .+.+|-|--+ ..+..|...
T Consensus 61 ---------------~~yl~~~~i~~~a~~~~~~ai~pgy-gflsen~~~a~~~~~~--gi~~iGp~~~~~~~~~~K~~~ 122 (1150)
T 3hbl_A 61 ---------------ESYLNIERIIDVAKQANVDAIHPGY-GFLSENEQFARRCAEE--GIKFIGPHLEHLDMFGDKVKA 122 (1150)
T ss_dssp ---------------GGGTCHHHHHHHHHHTTCSEEECTT-TTSTTCHHHHHHHHHT--TCEESSSCHHHHHHHHSHHHH
T ss_pred ---------------HCCCCHHHHHHHHHHHCCCEEECCC-CCCCCCHHHHHHHHHC--CCEEECCCHHHHHHHCCHHHH
T ss_conf ---------------2115999999999997929996584-4032499999999987--997989699999983599999
Q ss_pred HHHHHHHCCCCC
Q ss_conf 999997089675
Q gi|254780234|r 159 IDFAEKHAIPID 170 (404)
Q Consensus 159 i~ya~~~gIpv~ 170 (404)
-+.++++|||+.
T Consensus 123 k~~~~~~gvp~~ 134 (1150)
T 3hbl_A 123 RTTAIKADLPVI 134 (1150)
T ss_dssp HHHHHHTTCCBC
T ss_pred HHHHHHCCCCCC
T ss_conf 999998699848
No 44
>1v6t_A Hypothetical UPF0271 protein PH0986; TIM-barrel, lactam utilization protein, structural genomics; 1.70A {Pyrococcus horikoshii OT3} SCOP: c.6.2.5
Probab=87.16 E-value=0.32 Score=27.50 Aligned_cols=148 Identities=16% Similarity=0.208 Sum_probs=96.0
Q ss_pred HHHHHHHHHCCCCEE---ECHHHC--CCCHHHH---HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 999999885689287---500111--6821567---99999985879707744100687637999999997089675665
Q gi|254780234|r 102 KYLVDIANETGADAI---AHGSTG--KGNDQVR---FELSAYSLNSDIEIIAPWRHWSFKGRQDLIDFAEKHAIPIDKNK 173 (404)
Q Consensus 102 ~~lv~~a~~~ga~~i---aHG~Tg--kGNDQvR---Fe~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~~~~ 173 (404)
..+..+|+..|+..- .||+-. .-+|.-= +=.+++..+|++.++.|.. | ...+-|+++|+++-..-
T Consensus 92 ~al~~~a~~~g~~l~hVKPHGALYN~~~~D~~lA~ai~~ai~~~~~~l~l~~l~~-----s--~~~~~A~~~Gl~~~~E~ 164 (255)
T 1v6t_A 92 GALYAFAKAEGLELQHVKPHGALYNAMVKEEDLARAVIEGILDFDKDLILVTLSN-----S--RVADIAEEMGLKVAHEV 164 (255)
T ss_dssp HHHHHHHHHTTCCEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHCTTCEEEEETT-----C--HHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCC-----H--HHHHHHHHCCCCEEEEE
T ss_conf 9999999983990244231278888886299999999999998597641753584-----4--99999997399725999
Q ss_pred CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCC-HHHCCCCCEEEEEEEECCEEEEECCEECCHHHHHHHHHHH
Q ss_conf 678864157243115457632458457682010014658-1227999638999995024787516231899999999888
Q gi|254780234|r 174 RGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVS-PEEAPDTPTTIRIDFQRGDPIAINGQVMSPEVLLEQLNQY 252 (404)
Q Consensus 174 ~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~-p~~ap~~pe~v~I~Fe~G~PVainG~~~~~~~li~~LN~i 252 (404)
=.++.|.-|-.|.-|+.++..+.||..-. +-+..+... .-.+ ..-+.|.+.++ -+-|-|..-..+++++.+.+.
T Consensus 165 FADR~Y~~dG~Lv~R~~~gAvi~d~~~~~-~q~~~~~~~g~V~t-i~G~~I~i~ad---TICvHgDtp~Av~~a~~ir~~ 239 (255)
T 1v6t_A 165 FADRAYNPDGTLVPRGRPGAVIEDKEEIA-ERVISMVKDGGIRA-INGEWVDLKVD---TICVHGDNPKAVEITSYIRKV 239 (255)
T ss_dssp CTTBCBCTTSCBCC-----CBCCCHHHHH-HHHHHHHHHSEEEC-TTSCEEECCCS---EEECCCSSHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCEEECCCCCCCCCCHHHHH-HHHHHHHHCCCEEE-CCCCEEECCCC---EEEECCCCHHHHHHHHHHHHH
T ss_conf 75044889998863668655579999999-99999986798891-48988751689---899899987899999999999
Q ss_pred HHHCCCCCE
Q ss_conf 642163741
Q gi|254780234|r 253 GRCNGIGRI 261 (404)
Q Consensus 253 gg~~GvGr~ 261 (404)
--++||-..
T Consensus 240 L~~~gi~I~ 248 (255)
T 1v6t_A 240 LEEEGVKIV 248 (255)
T ss_dssp HHHTTCEEC
T ss_pred HHHCCCEEE
T ss_conf 998899997
No 45
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferase, sugar transport, phosphorylation; NMR {Escherichia coli K12} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=87.05 E-value=0.92 Score=24.22 Aligned_cols=41 Identities=22% Similarity=0.244 Sum_probs=32.4
Q ss_pred CCEEEEEECCCHHHHHHHHHHHH---HCCCEEEEEEEECCCCCH
Q ss_conf 77899991477259999999987---189869999945787110
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQV---EKGLEVIVFIADLGQGEE 45 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~---e~g~eVi~~~~d~Gq~~d 45 (404)
+|||+|+.+||.-||..+.-+++ ++|.++....+..++-++
T Consensus 3 ~k~IlL~C~~G~STs~l~~km~~~a~~~~~~~~i~A~~~~~~~~ 46 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGE 46 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEECSSSTTH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHH
T ss_conf 88899984896119999999999999879988999940788875
No 46
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=85.81 E-value=1.8 Score=22.05 Aligned_cols=130 Identities=18% Similarity=0.229 Sum_probs=66.9
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCC
Q ss_conf 77899991477259999999987189869999945787110689999999739807998200899999879999736865
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANAL 84 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~ 84 (404)
||||.+|=+|=.=-.+ +.-+| +.|+++|++..|-- .+.-.. .+ |.+.|.+..
T Consensus 1 ikkiLIanrGeiA~ri-ira~r-elGi~tVaV~s~~D--~~a~~~-----~~-ADe~~~i~~------------------ 52 (451)
T 2vpq_A 1 MKKVLIANRGEIAVRI-IRACR-DLGIQTVAIYSEGD--KDALHT-----QI-ADEAYCVGP------------------ 52 (451)
T ss_dssp -CEEEECCCHHHHHHH-HHHHH-HTTCEEEEEEEGGG--TTCHHH-----HH-SSEEEEEEC------------------
T ss_pred CCEEEEECCCHHHHHH-HHHHH-HCCCEEEEECCCHH--HCCCCH-----HH-CCEEEEECC------------------
T ss_conf 9689998970999999-99999-87995999848367--468897-----78-899998189------------------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHH---------------------------HCCCCHHHHHHHHHHHH
Q ss_conf 478742013012433599999998856892875001---------------------------11682156799999985
Q gi|254780234|r 85 YEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGS---------------------------TGKGNDQVRFELSAYSL 137 (404)
Q Consensus 85 Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~---------------------------TgkGNDQvRFe~~~~~l 137 (404)
+.+-..++-...++++|++.+||+|--|- .-.-.|..++-.....+
T Consensus 53 -------~~~~~syLd~~~Ii~ia~~~~~DaIhPGyGflsEn~~fa~~~~~~gi~fIGPs~~~i~~~gdK~~ar~~a~~~ 125 (451)
T 2vpq_A 53 -------TLSKDSYLNIPNILSIATSTGCDGVHPGYGFLAENADFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIKA 125 (451)
T ss_dssp -------SSGGGTTTCHHHHHHHHHHTTCSEEECCSSTTTTCHHHHHHHHTTTCEESSSCHHHHHHHHSHHHHHHHHHHT
T ss_pred -------CCCCCCCCCHHHHHHHHHHHCCCEEEECHHHHCCCHHHHHHHHHCCCEECCCCHHHHHHHHCHHHHHHHHHHC
T ss_conf -------8642343689999999999782999958666344667789999759846079799999864868999999986
Q ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 87970774410068763799999999708967566
Q gi|254780234|r 138 NSDIEIIAPWRHWSFKGRQDLIDFAEKHAIPIDKN 172 (404)
Q Consensus 138 ~P~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~~~ 172 (404)
+ +. +.|+......+-++..+.|++-|.|+=..
T Consensus 126 g--vP-v~pg~~~~~~~~~ea~~~a~~IGyPviIK 157 (451)
T 2vpq_A 126 N--VP-VVPGSDGLMKDVSEAKKIAKKIGYPVIIK 157 (451)
T ss_dssp T--CC-BCSBCSSCBSCHHHHHHHHHHHCSSEEEE
T ss_pred C--CC-CCCCCCCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 9--99-18997777799999999998739969999
No 47
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=84.94 E-value=2 Score=21.77 Aligned_cols=150 Identities=19% Similarity=0.125 Sum_probs=77.7
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHC----------------------------------C-CEEEEEEE------ECCC
Q ss_conf 77789999147725999999998718----------------------------------9-86999994------5787
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEK----------------------------------G-LEVIVFIA------DLGQ 42 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~----------------------------------g-~eVi~~~~------d~Gq 42 (404)
..+++|+.-|||+||+++......-- + .+|++++. --..
T Consensus 302 ~~~~~vlglSGGiDSal~a~la~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~mp~~y~s~~~~ 381 (634)
T 3ilv_A 302 RSKGFVLSLSGGADSSACAIMVAEMIRKGLKELGLTAFLQKSNMETLFDLPALQHLPFEEQAKKITAVFLTTAYQSTRNS 381 (634)
T ss_dssp TCCSEEEECCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCGGGCCSSCSSCTTSHHHHHHHHHHHEEEEEEECTTC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCC
T ss_conf 47776767862055769999999999987776332222245525555445665313334441037898658754467761
Q ss_pred -CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHC-CC-CCCC-----CCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf -110689999999739807998200899999879999736-86-5478-----742013012433599999998856892
Q gi|254780234|r 43 -GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRA-NA-LYEG-----YYLLGTAIARPLIAKYLVDIANETGAD 114 (404)
Q Consensus 43 -~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~a-na-~Yeg-----~Ypl~tslaRplia~~lv~~a~~~ga~ 114 (404)
.+-.+.+++-|..+|+ ++.+++..+.+ +.+. ..+.. .. ...+ .+-+.-+-.|. ..+...|++.|.=
T Consensus 382 ~d~t~~~A~~la~~lg~-~~~~i~I~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~eNiqaR~R~---~~l~~~an~~~~l 455 (634)
T 3ilv_A 382 GDETYTSAKTLAESIGA-TFYNWSVDEEI-EQYK-ATIENVIERPLTWEKDDITLQNIQARGRA---PIIWMLTNVKQAL 455 (634)
T ss_dssp CSHHHHHHHHHHHHHTC-EEEEEECHHHH-HHHH-HHHHHHTTSCCCTTTCHHHHHHHHHHTTH---HHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHHHCC-CEEEEEECHHH-HHHH-HHHHHHHCCCCCCCCCHHHHHHHHHHHHH---HHHHHHHHHCCEE
T ss_conf 68899999999997188-15788610899-9999-76443203676763003344414556779---9999977547979
Q ss_pred EEECHHHCCCCHHHHHHHHHHHHCCC-CEEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 87500111682156799999985879-7077441006876379999999970
Q gi|254780234|r 115 AIAHGSTGKGNDQVRFELSAYSLNSD-IEIIAPWRHWSFKGRQDLIDFAEKH 165 (404)
Q Consensus 115 ~iaHG~TgkGNDQvRFe~~~~~l~P~-l~viaP~Rd~~~~sRe~~i~ya~~~ 165 (404)
++..| |.-. .-+.+-+++-| +.-++|+-+..-+---+...|+.++
T Consensus 456 vl~Tg-----N~SE-~a~Gy~T~~GD~~~~~~pi~~l~Kt~v~~l~~~~~~~ 501 (634)
T 3ilv_A 456 LITTS-----NRSE-GDVGYATMDGDTAGGIAPIAGVDKDFIRSWLRWAEKN 501 (634)
T ss_dssp EBCCC-----CHHH-HHTTCSCTTTTTCSSBBTTTTSCHHHHHHHHHHHHHH
T ss_pred EECCC-----CCCC-CEECCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 98579-----8777-1041103158766666401687289999999996300
No 48
>2pfs_A USP, universal stress protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.25A {Nitrosomonas europaea atcc 19718}
Probab=84.52 E-value=2.1 Score=21.64 Aligned_cols=113 Identities=13% Similarity=0.055 Sum_probs=57.8
Q ss_pred CCCEEEEEECCCHHHHHHHHH---HHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHH---HHHHHH
Q ss_conf 777899991477259999999---98718986999994578711068999999973980799820089999---987999
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKW---LQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFV---RDFVFP 77 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~---L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~---~~~i~~ 77 (404)
.-|||++|.-|.-.+..++.| |....+.+++.+++----. ... ....+.........+++.. .+.+..
T Consensus 5 ~yk~ILvavD~s~~s~~al~~A~~lA~~~~a~l~~lhV~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 78 (150)
T 2pfs_A 5 VYHHILLAVDFSSEDSQVVQKVRNLASQIGARLSLIHVLDNIP-----MPD-TPYGTAIPLDTETTYDAMLDVEKQKLSQ 78 (150)
T ss_dssp SCSEEEEECCCCTTHHHHHHHHHHHHHHHTCEEEEEEEEC----------------CCCCSSSCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEEEECCC-----CCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 7886999973998999999999999998199788668985144-----554-4444455423799999999999999999
Q ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCH
Q ss_conf 9736865478742013012433599999998856892875001116821
Q gi|254780234|r 78 MFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGND 126 (404)
Q Consensus 78 ~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGND 126 (404)
.... .+.....+.+..--.++.+++.+++.++|.|.=|+.|++.-
T Consensus 79 ~~~~----~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~~~~~ 123 (150)
T 2pfs_A 79 IGNT----LGIDPAHRWLVWGEPREEIIRIAEQENVDLIVVGSHGRHGL 123 (150)
T ss_dssp HHHH----HTCCGGGEEEEESCHHHHHHHHHHHTTCSEEEEEEC-----
T ss_pred HHHH----CCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 8985----49975279998188899999999863876798727999965
No 49
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=84.14 E-value=2.2 Score=21.53 Aligned_cols=36 Identities=22% Similarity=0.481 Sum_probs=23.9
Q ss_pred CC-CCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 98-777789999147725999999998718986999994
Q gi|254780234|r 1 MS-RDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIA 38 (404)
Q Consensus 1 M~-~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~ 38 (404)
|+ +.+|||.+|=+|=.--.+ +.-++ +.|+++|++..
T Consensus 1 m~~~~~kkvLianrGeia~ri-~ra~r-elGi~tVav~s 37 (461)
T 2dzd_A 1 METRRIRKVLVANRGEIAIRV-FRACT-ELGIRTVAIYS 37 (461)
T ss_dssp --CCCCSEEEECSCHHHHHHH-HHHHH-HHTCEEEEEEC
T ss_pred CCCCCCCEEEEECCCHHHHHH-HHHHH-HCCCEEEEEEC
T ss_conf 998766689998972999999-99999-87996999928
No 50
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=81.61 E-value=0.82 Score=24.58 Aligned_cols=108 Identities=7% Similarity=0.116 Sum_probs=58.4
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHH---HHHHCCCEEEEEEEECCCC---------CHHHHHHHHHHHCCCEEEEEECHHH
Q ss_conf 987777899991477259999999---9871898699999457871---------1068999999973980799820089
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKW---LQVEKGLEVIVFIADLGQG---------EELKIASDKARLLGAKEVYVKDLRR 68 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~---L~~e~g~eVi~~~~d~Gq~---------~d~~~~~~~A~~~Ga~~~~v~D~r~ 68 (404)
|.+ .|||+++..+.-++..++.+ |....+++++.+++-...+ ++....++... +-+.
T Consensus 4 M~~-~kkILV~~D~s~~~~~al~~A~~lA~~~~a~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 72 (319)
T 3olq_A 4 MEK-YQNLLVVIDPNQDDQPALRRAVYIVQRNGGRIKAFLPVYDLSYDMTTLLSPDERNAMRKGVI----------NQKT 72 (319)
T ss_dssp -CC-SCEEEEECCTTCSCCHHHHHHHHHHHHHCCEEEEEEEECCGGGGCTTTSCHHHHHHHHHHHH----------HHHH
T ss_pred CCC-CCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH----------HHHH
T ss_conf 245-79399997698889999999999999809979999997468753334457015689999999----------9999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHCCCCEEECHHHCCCC
Q ss_conf 9999879999736865478742013012-43359999999885689287500111682
Q gi|254780234|r 69 EFVRDFVFPMFRANALYEGYYLLGTAIA-RPLIAKYLVDIANETGADAIAHGSTGKGN 125 (404)
Q Consensus 69 ef~~~~i~~~I~ana~Yeg~Ypl~tsla-Rplia~~lv~~a~~~ga~~iaHG~TgkGN 125 (404)
+..++........+ .+..+.+- -.-.+..+++.+++.++|.|.-|+.|++.
T Consensus 73 ~~l~~~~~~~~~~~------~~~~~~v~~~~~~~~~i~~~a~~~~~DLiV~G~~~~~~ 124 (319)
T 3olq_A 73 AWIKQQARYYLEAG------IQIDIKVIWHNRPYEAIIEEVITDKHDLLIKMAHQHDK 124 (319)
T ss_dssp HHHHHHHHHHHHTT------CCEEEEEEECSCHHHHHHHHHHHHTCSEEEEEEBCC--
T ss_pred HHHHHHHHHHHHCC------CCEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 99999998777549------95589999868858999999996598889741568763
No 51
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=80.66 E-value=1.5 Score=22.62 Aligned_cols=115 Identities=15% Similarity=0.121 Sum_probs=74.7
Q ss_pred CCCCCEE-EEEECC--CHHHHHHHHHHHHHCCCEEEEEEEEC----CCC--CHHHHHHHHHHHCCCEEEEEECHHHHHHH
Q ss_conf 8777789-999147--72599999999871898699999457----871--10689999999739807998200899999
Q gi|254780234|r 2 SRDVKKV-VLAYSG--GLDTSIILKWLQVEKGLEVIVFIADL----GQG--EELKIASDKARLLGAKEVYVKDLRREFVR 72 (404)
Q Consensus 2 ~~~~kkV-vlaySG--GLDTSv~i~~L~~e~g~eVi~~~~d~----Gq~--~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~ 72 (404)
+++.|+| |+.-|- |--+..++.+|+ +.||+|+.+.-.. |++ ..++++.+ ..+..++=...+++.
T Consensus 11 ~~~~KsIAVVGaS~~~~k~g~~v~~~l~-~~g~~V~pVnP~~~~I~G~~~y~sl~dip~------~iDlvvi~~p~~~~~ 83 (138)
T 1y81_A 11 SKEFRKIALVGASKNPAKYGNIILKDLL-SKGFEVLPVNPNYDEIEGLKCYRSVRELPK------DVDVIVFVVPPKVGL 83 (138)
T ss_dssp ---CCEEEEETCCSCTTSHHHHHHHHHH-HTTCEEEEECTTCSEETTEECBSSGGGSCT------TCCEEEECSCHHHHH
T ss_pred CCCCCEEEEECCCCCCCCHHHHHHHHHH-HCCCEEEEECCCCCEECCEECCCCCCCCCC------CCEEEEEEECHHHHH
T ss_conf 6104779999216999982999999999-789989998899848835254442012787------530799981788879
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHH
Q ss_conf 8799997368654787420130124335999999988568928750011168215679
Q gi|254780234|r 73 DFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRF 130 (404)
Q Consensus 73 ~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRF 130 (404)
+.+..+++.+.. .-|+.... ....+.+.+++.|..++..-|.|--|.-.|+
T Consensus 84 ~il~e~~~~g~k---~v~~q~G~----~~~e~~~~a~~~Gi~vigpnC~gv~~~~~kl 134 (138)
T 1y81_A 84 QVAKEAVEAGFK---KLWFQPGA----ESEEIRRFLEKAGVEYSFGRCIMVETSNKKI 134 (138)
T ss_dssp HHHHHHHHTTCC---EEEECTTS----CCHHHHHHHHHHTCEEECSCCHHHHC-----
T ss_pred HHHHHHHHCCCC---EEEEECCH----HHHHHHHHHHHCCCEEECCCCCEEEECCCCC
T ss_conf 999999756999---78960764----4199999999849989907905287156541
No 52
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, structural genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2
Probab=78.23 E-value=3.1 Score=20.42 Aligned_cols=36 Identities=28% Similarity=0.339 Sum_probs=29.4
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 9877778999914772599999999871898699999
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFI 37 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~ 37 (404)
|++++|||++.=..|.--|.++..|. +.|++|+++.
T Consensus 23 ~~~~kKKIlITGg~GfIG~~lv~~L~-~~g~~V~~~d 58 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLM-MDGHEVTVVD 58 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEE
T ss_pred HHCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEE
T ss_conf 00069889997788089999999999-7869899996
No 53
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=76.53 E-value=3.8 Score=19.80 Aligned_cols=153 Identities=21% Similarity=0.248 Sum_probs=93.6
Q ss_pred CCC--CCCEEEEEECCCHH----------HHHHHHHHHHHCCCEEEEEEEECCCC-CHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf 987--77789999147725----------99999999871898699999457871-106899999997398079982008
Q gi|254780234|r 1 MSR--DVKKVVLAYSGGLD----------TSIILKWLQVEKGLEVIVFIADLGQG-EELKIASDKARLLGAKEVYVKDLR 67 (404)
Q Consensus 1 M~~--~~kkVvlaySGGLD----------TSv~i~~L~~e~g~eVi~~~~d~Gq~-~d~~~~~~~A~~~Ga~~~~v~D~r 67 (404)
|-+ +.|||+++=||... +|=++.-|+ +.|+++|.+.-|--.- -|.+ . |.+.|+..+.
T Consensus 1 mp~~~~ikKVLIiGsG~i~IGqa~EfDys~~qai~alk-e~Gi~tVlVnsNpati~td~~--------~-AD~vYiePlt 70 (1073)
T 1a9x_A 1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALR-EEGYRVINVNSNPATIMTDPE--------M-ADATYIEPIH 70 (1073)
T ss_dssp CCCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHH-HHTCEEEEECSCTTCGGGCGG--------G-SSEEECSCCC
T ss_pred CCCCCCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHH-HCCCEEEEECCCHHHHCCCCC--------C-CCEEEECCCC
T ss_conf 98988888899988880231301013778999999999-879989998588446248844--------1-5067987899
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH--HHHCCCCEEECH--HHCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf 9999987999973686547874201301243359999999--885689287500--111682156799999985879707
Q gi|254780234|r 68 REFVRDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDI--ANETGADAIAHG--STGKGNDQVRFELSAYSLNSDIEI 143 (404)
Q Consensus 68 ~ef~~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~--a~~~ga~~iaHG--~TgkGNDQvRFe~~~~~l~P~l~v 143 (404)
-+++.+.+ ..-+..|+.-+ |=-.|+|. .+..+.+. ..+.|...|..- +--+.+|..+|-.....++ +.+
T Consensus 71 ~e~i~~Ii-~~e~pDaI~p~-~GgqtaLn---l~~~L~e~gil~~~gI~~iGps~~~I~~~~Dr~~~r~~m~~~g--vPv 143 (1073)
T 1a9x_A 71 WEVVRKII-EKERPDAVLPT-MGGQTALN---CALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIG--LET 143 (1073)
T ss_dssp HHHHHHHH-HHHCCSEEECS-SSHHHHHH---HHHHHHHTTHHHHHTCEECSSCHHHHHHHHSHHHHHHHHHHTT--CCC
T ss_pred HHHHHHHH-HHHCCCEEEEC-CCCHHHHH---HHHHHHHCCCHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCC--CCC
T ss_conf 99999999-98589999988-87847899---9999997596787798898899999997259999999999779--998
Q ss_pred EEEECCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 744100687637999999997089675665
Q gi|254780234|r 144 IAPWRHWSFKGRQDLIDFAEKHAIPIDKNK 173 (404)
Q Consensus 144 iaP~Rd~~~~sRe~~i~ya~~~gIpv~~~~ 173 (404)
.|+ +-..+-++.++.|++-|+||=..+
T Consensus 144 -~~s--~~v~s~eea~~~A~~IGyPViIrp 170 (1073)
T 1a9x_A 144 -ARS--GIAHTMEEALAVAADVGFPCIIRP 170 (1073)
T ss_dssp -CSE--EEESSHHHHHHHHHHHCSSEEEEE
T ss_pred -CCC--EEECCHHHHHHHHHHCCCCEEEEE
T ss_conf -997--220899999999986599889997
No 54
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=75.79 E-value=4 Score=19.67 Aligned_cols=42 Identities=29% Similarity=0.402 Sum_probs=30.8
Q ss_pred CCC-CCCEEEEEECC-----CH---HHHHHHHHHHHHCCCEEEEEEEECCCC
Q ss_conf 987-77789999147-----72---599999999871898699999457871
Q gi|254780234|r 1 MSR-DVKKVVLAYSG-----GL---DTSIILKWLQVEKGLEVIVFIADLGQG 43 (404)
Q Consensus 1 M~~-~~kkVvlaySG-----GL---DTSv~i~~L~~e~g~eVi~~~~d~Gq~ 43 (404)
|+. .||||.+-.|| |. ...+.+..|+ +.|++|.++..+.+|.
T Consensus 1 m~~~~MKKvaviLsg~g~~DG~E~~E~~~p~~~L~-raG~~V~~~sp~~~~~ 51 (232)
T 1vhq_A 1 MSLITMKKIGVILSGCGVYDGSEIHEAVLTLLAIS-RSGAQAVCFAPDKQQV 51 (232)
T ss_dssp -----CCEEEEECCSBSTTTSBCHHHHHHHHHHHH-HTTCEEEEEECSSBCS
T ss_pred CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH-HCCCEEEEEECCCCCC
T ss_conf 97656675999966887877502989999999999-8899799995799855
No 55
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural genomics, protein structure initiative; 2.10A {Bacillus halodurans}
Probab=75.40 E-value=4 Score=19.67 Aligned_cols=41 Identities=27% Similarity=0.225 Sum_probs=30.6
Q ss_pred CCCCCCEEEEEECCCHHHH----HHHHHHHHHCCCEEEEEEEECCC
Q ss_conf 9877778999914772599----99999987189869999945787
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTS----IILKWLQVEKGLEVIVFIADLGQ 42 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTS----v~i~~L~~e~g~eVi~~~~d~Gq 42 (404)
|+-+-|||+++.+|+.-+= -.+..|+ +.|++|+.+.-+-++
T Consensus 3 M~l~gK~I~lgITGs~a~~~~~l~li~~L~-~~g~~V~vI~S~~A~ 47 (201)
T 3lqk_A 3 MNFAGKHVGFGLTGSHCTYHEVLPQMERLV-ELGAKVTPFVTHTVQ 47 (201)
T ss_dssp CCCTTCEEEEECCSCGGGGGGTHHHHHHHH-HTTCEEEEECSSCSC
T ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHHHHH-HCCCEEEEEECHHHH
T ss_conf 887899899997585999999999999999-889969999774288
No 56
>2dgd_A 223AA long hypothetical arylmalonate decarboxylase; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=73.98 E-value=1.1 Score=23.77 Aligned_cols=97 Identities=13% Similarity=0.077 Sum_probs=60.2
Q ss_pred HHHHHHHHCCC-CEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCC
Q ss_conf 99999985879-70774410068763799999999708967566567886415724311545763245845768201001
Q gi|254780234|r 130 FELSAYSLNSD-IEIIAPWRHWSFKGRQDLIDFAEKHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYK 208 (404)
Q Consensus 130 Fe~~~~~l~P~-l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~ 208 (404)
.-.+++.|+.. +.+++||-++ --+...+|.+++|+.|..... +....+ .+....+|+.++.
T Consensus 99 ~~~AL~~lg~krIav~TPY~~~---v~~~~~~~~~~~G~eVv~~~~----l~~~~~-----------~~i~~~~~~~i~~ 160 (223)
T 2dgd_A 99 VYELLKKLNVRKLWIGTPYIKE---RTLEEVEWWRNKGFEIVGYDG----LGKIRG-----------IDISNTPIFTIYR 160 (223)
T ss_dssp HHHHHHHTTCCEEEEEESSCHH---HHHHHHHHHHTTTCEEEEEEE----CCCCSH-----------HHHHTCCHHHHHH
T ss_pred HHHHHHHCCCCEEEEECCCCHH---HHHHHHHHHHHCCEEEEEECC----CCCCCC-----------CCCCCCCHHHHHH
T ss_conf 9999997299807996788657---789999999967913752020----487765-----------4202399999999
Q ss_pred CCCCH-HHCCCCCEEEEEEEECCEEEEECCEECCHHHHHHHHHHHHHH
Q ss_conf 46581-227999638999995024787516231899999999888642
Q gi|254780234|r 209 MIVSP-EEAPDTPTTIRIDFQRGDPIAINGQVMSPEVLLEQLNQYGRC 255 (404)
Q Consensus 209 ~t~~p-~~ap~~pe~v~I~Fe~G~PVainG~~~~~~~li~~LN~igg~ 255 (404)
..+.. .+.|+ + ..|-|-+..|.-+++|..|.+.-|+
T Consensus 161 ~~~~~~~~~~~-a----------dav~iscT~l~t~~~i~~lE~~lg~ 197 (223)
T 2dgd_A 161 LVKRHLNEVLK-A----------DAVYIACTALSTYEAVQYLHEDLDM 197 (223)
T ss_dssp HHHTTHHHHTT-S----------SEEEECCTTSCCTTHHHHHHHHHTS
T ss_pred HHHHHHCCCCC-C----------CEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 99997411457-8----------7899941586388899999999898
No 57
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=73.94 E-value=4.4 Score=19.35 Aligned_cols=41 Identities=27% Similarity=0.220 Sum_probs=30.1
Q ss_pred CCCCCCEEEEEECCCHHHH----HHHHHHHHHCCCEEEEEEEECCC
Q ss_conf 9877778999914772599----99999987189869999945787
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTS----IILKWLQVEKGLEVIVFIADLGQ 42 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTS----v~i~~L~~e~g~eVi~~~~d~Gq 42 (404)
|+-+-|||+|+.+|+..+- -++..|+ +.|++|..+.-+-++
T Consensus 1 M~L~gKrI~lgiTGs~aa~~~~~~li~~L~-~~g~~V~vv~S~~A~ 45 (207)
T 3mcu_A 1 MSLKGKRIGFGFTGSHCTYEEVMPHLEKLI-AEGAEVRPVVSYTVQ 45 (207)
T ss_dssp -CCTTCEEEEEECSCGGGGTTSHHHHHHHH-HTTCEEEEEECC---
T ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHHHHH-HCCCEEEEEECHHHH
T ss_conf 988899999997484999999999999999-889969999865699
No 58
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=73.80 E-value=4.4 Score=19.33 Aligned_cols=94 Identities=9% Similarity=0.126 Sum_probs=57.3
Q ss_pred CCCCCEEEEEECCCHHHHHHHH---HHHHHCCCEEEEEEEECCCCC--HHHHHHHHHHHCCCEEEEEECHHHHHHHHHHH
Q ss_conf 8777789999147725999999---998718986999994578711--06899999997398079982008999998799
Q gi|254780234|r 2 SRDVKKVVLAYSGGLDTSIILK---WLQVEKGLEVIVFIADLGQGE--ELKIASDKARLLGAKEVYVKDLRREFVRDFVF 76 (404)
Q Consensus 2 ~~~~kkVvlaySGGLDTSv~i~---~L~~e~g~eVi~~~~d~Gq~~--d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~ 76 (404)
|+.+|||+++..+.-.+.-++. ||....+.+++.++++.-... .++...+.+...|.. .... .
T Consensus 4 M~~~k~ILV~vd~s~~~~~al~~A~~lA~~~~a~l~~l~v~~~~~~~~~l~~~~~~~~~~~~~-~~~~-~---------- 71 (290)
T 3mt0_A 4 MQAIRSILVVIEPDQLEGLALKRAQLIAGVTQSHLHLLVCEKRRDHSAALNDLAQELREEGYS-VSTN-Q---------- 71 (290)
T ss_dssp TTTCCEEEEECCSSCSCCHHHHHHHHHHHHHCCEEEEEEECSSSCCHHHHHHHHHHHHHTTCC-EEEE-E----------
T ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCC-EEEE-E----------
T ss_conf 125686999978987799999999999998599799999804489999999999999964995-5899-8----------
Q ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCC
Q ss_conf 9973686547874201301243359999999885689287500111682
Q gi|254780234|r 77 PMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGN 125 (404)
Q Consensus 77 ~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGN 125 (404)
...| ..+..+++.+++.+++.|.-|..+.+.
T Consensus 72 -------~~~~-----------~~~~~I~~~a~~~~~dlvv~g~~~~~~ 102 (290)
T 3mt0_A 72 -------AWKD-----------SLHQTIIAEQQAEGCGLIIKQHFPDNP 102 (290)
T ss_dssp -------ECSS-----------SHHHHHHHHHHHHTCSEEEEECCCSCT
T ss_pred -------ECCC-----------CHHHHHHHHHHHCCCCCEEECCCCCCC
T ss_conf -------4179-----------879999999996599733644677886
No 59
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp}
Probab=73.59 E-value=4.5 Score=19.29 Aligned_cols=34 Identities=21% Similarity=0.455 Sum_probs=21.4
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEE
Q ss_conf 777899991477259999999987189869999945
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIAD 39 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d 39 (404)
++|||.+|=.|=-=-- ++.-+| +.|+++|++..|
T Consensus 5 ~~kkiLianrGeiA~r-iiraar-elG~~tV~V~s~ 38 (446)
T 3ouz_A 5 EIKSILIANRGEIALR-ALRTIK-EMGKKAICVYSE 38 (446)
T ss_dssp CCCEEEECCCHHHHHH-HHHHHH-HTTCEEEEEEEG
T ss_pred CCCEEEEECCCHHHHH-HHHHHH-HCCCCEEEEECC
T ss_conf 4538999898699999-999999-869919999275
No 60
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=73.46 E-value=3 Score=20.56 Aligned_cols=167 Identities=14% Similarity=0.056 Sum_probs=80.6
Q ss_pred CCCCCCE-E--EEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCC----EEEEEECHHHHH-HH
Q ss_conf 9877778-9--99914772599999999871898699999457871106899999997398----079982008999-99
Q gi|254780234|r 1 MSRDVKK-V--VLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGA----KEVYVKDLRREF-VR 72 (404)
Q Consensus 1 M~~~~kk-V--vlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga----~~~~v~D~r~ef-~~ 72 (404)
||.+++| | |..-|+|+--+++..+++ .|+.|+.+.-+ .+.++.+.+.....+. ...+..|+.++- ++
T Consensus 1 Ms~~~~k~vAlITGas~GIG~aia~~la~--~G~~Vi~~~r~---~~~l~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~ 75 (250)
T 3nyw_A 1 MSLEKQKGLAIITGASQGIGAVIAAGLAT--DGYRVVLIARS---KQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKAD 75 (250)
T ss_dssp ----CCCCEEEEESTTSHHHHHHHHHHHH--HTCEEEEEESC---HHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHH
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEECC---HHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHH
T ss_conf 98879999999956973999999999998--79989999898---99999999999983588874589980189999999
Q ss_pred HHHHHHH---------HCCCCCCCCCCCCCCHHH------------HHHHHHHHHHHHHCCCCEEE-CHHHCCCCHHHHH
Q ss_conf 8799997---------368654787420130124------------33599999998856892875-0011168215679
Q gi|254780234|r 73 DFVFPMF---------RANALYEGYYLLGTAIAR------------PLIAKYLVDIANETGADAIA-HGSTGKGNDQVRF 130 (404)
Q Consensus 73 ~~i~~~I---------~ana~Yeg~Ypl~tslaR------------plia~~lv~~a~~~ga~~ia-HG~TgkGNDQvRF 130 (404)
..+.... -.||-.-..-++..++.. ..+.+.+++.+++.+-..|- =+|. .|
T Consensus 76 ~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IinisS~-~~------ 148 (250)
T 3nyw_A 76 TEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASR-AA------ 148 (250)
T ss_dssp HHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC----------
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCH-HH------
T ss_conf 99999999819963999876347898754899999999998859999999998999987799589997784-54------
Q ss_pred HHHHHHHCCCCEEEEEECC--CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCC
Q ss_conf 9999985879707744100--6876379999999970896756656788641572431154
Q gi|254780234|r 131 ELSAYSLNSDIEIIAPWRH--WSFKGRQDLIDFAEKHAIPIDKNKRGEAPFSIDTNLLHSS 189 (404)
Q Consensus 131 e~~~~~l~P~l~viaP~Rd--~~~~sRe~~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S 189 (404)
..-.|....|+.-.- ..|+ |.-. ..+..+||-|..- .|=-++.++|-..
T Consensus 149 ----~~~~~~~~~Y~asKaal~~lt-~sla-~El~~~gIrVn~i----~PG~v~T~~~~~~ 199 (250)
T 3nyw_A 149 ----KYGFADGGIYGSTKFALLGLA-ESLY-RELAPLGIRVTTL----CPGWVNTDMAKKA 199 (250)
T ss_dssp --------CCTTHHHHHHHHHHHHH-HHHH-HHHGGGTEEEEEE----EESSBCSHHHHHT
T ss_pred ----CCCCCCCHHHHHHHHHHHHHH-HHHH-HHHCCCCCEEEEE----ECCCCCCHHHHHH
T ss_conf ----668999747999999999999-9999-9855209199999----7298987588740
No 61
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata}
Probab=71.38 E-value=5 Score=18.94 Aligned_cols=109 Identities=17% Similarity=0.181 Sum_probs=60.3
Q ss_pred CEEEEEECCCHHHHHHHHHH---HHHCCCEEEEEEEECCC-----------CCHHHHHHHHHHHCCCEEEEEECHHHHHH
Q ss_conf 78999914772599999999---87189869999945787-----------11068999999973980799820089999
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWL---QVEKGLEVIVFIADLGQ-----------GEELKIASDKARLLGAKEVYVKDLRREFV 71 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L---~~e~g~eVi~~~~d~Gq-----------~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~ 71 (404)
|||++|.-|--++--++.|- ....+.+++.+++--.. ++..+...+.. .+...+..
T Consensus 3 ~~ILv~vD~S~~s~~al~~A~~la~~~~~~l~lv~v~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 72 (147)
T 3hgm_A 3 NRIMVPVDGSKGAVKALEKGVGLQQLTGAELYILCVFKHHSLLEASLSMARPEQLDIPDDAL----------KDYATEIA 72 (147)
T ss_dssp SEEEEECCSBHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHTBSSCCCGGGCCCTTHH----------HHHHHHHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH----------HHHHHHHH
T ss_conf 84999978999999999999999987299899999863776554432324524454479999----------99999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHH
Q ss_conf 98799997368654787420130124335999999988568928750011168215
Q gi|254780234|r 72 RDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQ 127 (404)
Q Consensus 72 ~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQ 127 (404)
+.+...+-..+. .+ ....+.+...-.++.+++.|++.++|.|.=|+.|++.-+
T Consensus 73 ~~~~~~~~~~~~--~~-~~~~~~v~~g~~~~~I~~~a~~~~~dliV~G~~~~~~~~ 125 (147)
T 3hgm_A 73 VQAKTRATELGV--PA-DKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQGTNGDK 125 (147)
T ss_dssp HHHHHHHHHTTC--CG-GGEEEEEEESCHHHHHHHHHHHTTCSEEEECSSCTTCCS
T ss_pred HHHHHHHHHHCC--CC-CEEEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCCCCC
T ss_conf 999999998289--97-469999963778998877520358888997179998654
No 62
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=71.30 E-value=3.6 Score=19.98 Aligned_cols=44 Identities=9% Similarity=0.084 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCE
Q ss_conf 725999999998718986999994578711068999999973980
Q gi|254780234|r 15 GLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAK 59 (404)
Q Consensus 15 GLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~ 59 (404)
|=|-=++..+|. +.|++|..+...-...++......++..++..
T Consensus 92 GGDGlv~AR~L~-~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~i~ 135 (265)
T 2o8n_A 92 GGDGLVCARHLK-LFGYQPTIYYPKRPNKPLFTGLVTQCQKMDIP 135 (265)
T ss_dssp HHHHHHHHHHHH-HTTCEEEEECCSCCSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHH-HCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
T ss_conf 699999999999-75990699994787775799999999876998
No 63
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidoreductase; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=69.89 E-value=5.4 Score=18.73 Aligned_cols=134 Identities=16% Similarity=0.115 Sum_probs=62.2
Q ss_pred CCEEEEEECCCHH---HHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHH-HHHHHHHHHHH
Q ss_conf 7789999147725---9999999987189869999945787110689999999739807998200899-99987999973
Q gi|254780234|r 5 VKKVVLAYSGGLD---TSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRRE-FVRDFVFPMFR 80 (404)
Q Consensus 5 ~kkVvlaySGGLD---TSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~e-f~~~~i~~~I~ 80 (404)
-|||+|+.+|+.- +--.+..|+ +.|++|..+.-+-++. -+...+...-..+ .+.|..+. ..-.++.-+=+
T Consensus 8 ~KkIllgiTGSiaa~k~~~li~~L~-~~g~~V~vv~T~~A~~----fi~~~~l~~l~~~-v~~~~~~~~~~~~Hi~l~~~ 81 (194)
T 1p3y_1 8 DKKLLIGICGSISSVGISSYLLYFK-SFFKEIRVVMTKTAED----LIPAHTVSYFCDH-VYSEHGENGKRHSHVEIGRW 81 (194)
T ss_dssp GCEEEEEECSCGGGGGTHHHHHHHT-TTSSEEEEEECHHHHH----HSCHHHHGGGSSE-EECTTCSSSCCCCHHHHHHH
T ss_pred CCEEEEEEECHHHHHHHHHHHHHHH-HCCCEEEEEEECCHHH----HCCHHHHHHHCCC-CCCCCCCCCCCCCHHHHHHH
T ss_conf 9969999948899999999999999-7899399999608544----3699888875287-31234001356544356564
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEEC---CCCCCCHHH
Q ss_conf 68654787420130124335999999988568928750011168215679999998587970774410---068763799
Q gi|254780234|r 81 ANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWR---HWSFKGRQD 157 (404)
Q Consensus 81 ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~R---d~~~~sRe~ 157 (404)
+.+ +..+ |+.+..+-++|. |-..|.+- ..+.+ ...=-+++|-- .|.-..-++
T Consensus 82 aD~-------~vVa---PaTaNtlaKiA~------------GiaDnllt--~~~la-~~~PviiaPaMn~~M~~~p~~~~ 136 (194)
T 1p3y_1 82 ADI-------YCII---PATANILGQTAN------------GVAMNLVA--TTVLA-HPHNTIFFPNMNDLMWNKTVVSR 136 (194)
T ss_dssp CSE-------EEEE---EECHHHHHHHHT------------TCCSSHHH--HHHHH-SSSCCEEEECCCHHHHTCHHHHH
T ss_pred CCE-------EEEC---CCCHHHHHHHHC------------CCCCCHHH--HHHHH-HCCCCEEEECCCHHHHHHHHHHH
T ss_conf 183-------5874---257458999837------------87476346--88997-46980688683899995378999
Q ss_pred HHHHHHHHCCCC
Q ss_conf 999999708967
Q gi|254780234|r 158 LIDFAEKHAIPI 169 (404)
Q Consensus 158 ~i~ya~~~gIpv 169 (404)
-++.+++.|+-+
T Consensus 137 ni~~L~~~G~~v 148 (194)
T 1p3y_1 137 NIEQLRKDGHIV 148 (194)
T ss_dssp HHHHHHHHTCEE
T ss_pred HHHHHHHCCCEE
T ss_conf 999999679999
No 64
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=69.85 E-value=5.4 Score=18.73 Aligned_cols=118 Identities=13% Similarity=0.171 Sum_probs=60.9
Q ss_pred HHCCCCEEECHHHC----CCCHHHH-HHH-------------------HHHHHCC-CCEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 85689287500111----6821567-999-------------------9998587-970774410068763799999999
Q gi|254780234|r 109 NETGADAIAHGSTG----KGNDQVR-FEL-------------------SAYSLNS-DIEIIAPWRHWSFKGRQDLIDFAE 163 (404)
Q Consensus 109 ~~~ga~~iaHG~Tg----kGNDQvR-Fe~-------------------~~~~l~P-~l~viaP~Rd~~~~sRe~~i~ya~ 163 (404)
...++|+|+.|||+ .|-++.+ |.. +++.++- .+.+++|+-++ -.+....|.+
T Consensus 63 ~~~~~d~I~~gCTs~s~~~G~~~~~~~~~~i~~~~g~pv~t~~~A~~~Al~~lg~krIav~tPY~~~---~~~~~~~~~~ 139 (240)
T 3ixl_A 63 QKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREATGLPCTTMSTAVLNGLRALGVRRVALATAYIDD---VNERLAAFLA 139 (240)
T ss_dssp HHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHSSCEEEHHHHHHHHHHHTTCSEEEEEESSCHH---HHHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHCCCCCEEECCCCHHH---HHHHHHHHHH
T ss_conf 2579999997686899952716799999988745799610679999999998099864543676489---9999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCH-HHCCCCCEEEEEEEECCEEEEECCEECCH
Q ss_conf 70896756656788641572431154576324584576820100146581-22799963899999502478751623189
Q gi|254780234|r 164 KHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVSP-EEAPDTPTTIRIDFQRGDPIAINGQVMSP 242 (404)
Q Consensus 164 ~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~p-~~ap~~pe~v~I~Fe~G~PVainG~~~~~ 242 (404)
++|+.|..... +-++. .++...-.|++++...... .+.|+ .+- |-+-+..|..
T Consensus 140 ~~G~~V~~~~~----~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~pd-~da----------I~iscT~~~t 193 (240)
T 3ixl_A 140 EESLVPTGCRS----LGITG-----------VEAMARVDTATLVDLCVRAFEAAPD-SDG----------ILLSSGGLLT 193 (240)
T ss_dssp HTTCEEEEEEE----CCCCC-----------HHHHHTCCHHHHHHHHHHHHHTSTT-CSE----------EEEECTTSCC
T ss_pred HCCCCCCCEEE----ECCCC-----------CCCCCEECHHHHHHHHHHHHHCCCC-CCE----------EEEECCCCHH
T ss_conf 73986232235----56776-----------6533234787799999998733888-768----------9985788618
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999888642
Q gi|254780234|r 243 EVLLEQLNQYGRC 255 (404)
Q Consensus 243 ~~li~~LN~igg~ 255 (404)
++++..|.+.-|+
T Consensus 194 ~~~i~~lE~~lg~ 206 (240)
T 3ixl_A 194 LDAIPEVERRLGV 206 (240)
T ss_dssp TTHHHHHHHHHSS
T ss_pred HHHHHHHHHHHCC
T ss_conf 8999999999898
No 65
>2x5e_A UPF0271 protein PA4511; unknown function; HET: CIT; 2.30A {Pseudomonas aeruginosa}
Probab=68.91 E-value=5.6 Score=18.58 Aligned_cols=95 Identities=14% Similarity=0.182 Sum_probs=67.1
Q ss_pred HHHHHHHHHCCCCE--E-ECHHHC--CCCHHHHHH---HHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999988568928--7-500111--682156799---999985879707744100687637999999997089675665
Q gi|254780234|r 102 KYLVDIANETGADA--I-AHGSTG--KGNDQVRFE---LSAYSLNSDIEIIAPWRHWSFKGRQDLIDFAEKHAIPIDKNK 173 (404)
Q Consensus 102 ~~lv~~a~~~ga~~--i-aHG~Tg--kGNDQvRFe---~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~~~~ 173 (404)
..+..+|+..|+.. | .||+-+ .-+|.-=.+ .+++.+.|++.++.+.- . .-....+.++++|+++-..-
T Consensus 98 ~al~~~a~~~g~~l~hVKpHGALYn~~~~D~~lA~ai~~ai~~~~~~l~l~~la~---~-~~~~~~~~A~~~Gl~~~~E~ 173 (252)
T 2x5e_A 98 GALDAFCRSLGTQVAYVKPHGALYNDLVGDDELLRAVLDACAAYRKGLPLMVLAL---A-DNGRELELADEADVPLLFEA 173 (252)
T ss_dssp HHHHHHHHHTTCCCCEECCCHHHHHHHTTCHHHHHHHHHHHHHHCTTCCEEEECC---S-CCHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC---C-CHHHHHHHHHHCCCCEEEEE
T ss_conf 9999999984991036531399999998619999999999998585642788624---7-60578889997799736899
Q ss_pred CCCCCCCCCHHHHCCCCCCCCCCCCCC
Q ss_conf 678864157243115457632458457
Q gi|254780234|r 174 RGEAPFSIDTNLLHSSSEGRVLEDPSQ 200 (404)
Q Consensus 174 ~~~~~yS~D~Nlwg~S~Egg~Ledp~~ 200 (404)
=.++.|--|-.|.-|+.++..+.||..
T Consensus 174 FADR~Y~~dG~Lv~R~~~gAvi~d~~~ 200 (252)
T 2x5e_A 174 FADRAYLPDGRLAPRRLGGAVHHDPQR 200 (252)
T ss_dssp ESSBCBCTTSSBCCTTSTTSBCCCHHH
T ss_pred EECCCCCCCCCEEECCCCCCEECCHHH
T ss_conf 753658889999654689842069999
No 66
>3ff4_A Uncharacterized protein; structural genomics, PSI- 2, protein structure initiative, midwest center for structural genomics; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=63.44 E-value=3.5 Score=20.02 Aligned_cols=103 Identities=14% Similarity=0.140 Sum_probs=62.0
Q ss_pred CCCCEEEE-EECC--CHHHHHHHHHHHHHCCCEEEEEEEECC----CC--CHHHHHHHHHHHCCCEEEEEECHHHHHHHH
Q ss_conf 77778999-9147--725999999998718986999994578----71--106899999997398079982008999998
Q gi|254780234|r 3 RDVKKVVL-AYSG--GLDTSIILKWLQVEKGLEVIVFIADLG----QG--EELKIASDKARLLGAKEVYVKDLRREFVRD 73 (404)
Q Consensus 3 ~~~kkVvl-aySG--GLDTSv~i~~L~~e~g~eVi~~~~d~G----q~--~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~ 73 (404)
..||+|++ .-|- +-.+-.++.+|+ +.||+|+.+.-.-+ ++ .+++. ....+..++=...+.+.+
T Consensus 2 ~~~K~iaVvGaS~~~~k~g~~v~~~L~-~~G~~V~pVnP~~~~I~G~~~~~sl~~-------p~~iD~v~i~~p~~~~~~ 73 (122)
T 3ff4_A 2 NAMKKTLILGATPETNRYAYLAAERLK-SHGHEFIPVGRKKGEVLGKTIINERPV-------IEGVDTVTLYINPQNQLS 73 (122)
T ss_dssp CCCCCEEEETCCSCTTSHHHHHHHHHH-HHTCCEEEESSSCSEETTEECBCSCCC-------CTTCCEEEECSCHHHHGG
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHH-HCCCEEEEECCCCCCCCEEEEEECCCC-------CCCCCEEEEEECHHHHHH
T ss_conf 976649999666999982999999999-789989998887761000589974556-------788757999958899899
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHH
Q ss_conf 799997368654787420130124335999999988568928750011
Q gi|254780234|r 74 FVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGST 121 (404)
Q Consensus 74 ~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~T 121 (404)
.+..++..+... -|+.... .-..+.+.|++.|..++ ++|+
T Consensus 74 ~v~e~~~~g~k~---vw~q~G~----~~e~~~~~a~~~Gi~vi-~~C~ 113 (122)
T 3ff4_A 74 EYNYILSLKPKR---VIFNPGT----ENEELEEILSENGIEPV-IGCT 113 (122)
T ss_dssp GHHHHHHHCCSE---EEECTTC----CCHHHHHHHHHTTCEEE-ESCH
T ss_pred HHHHHHHCCCCE---EEEECCC----CCHHHHHHHHHCCCEEE-CCCE
T ss_conf 999998539999---9993698----79999999999699799-5782
No 67
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=63.05 E-value=7.2 Score=17.81 Aligned_cols=37 Identities=22% Similarity=0.343 Sum_probs=25.0
Q ss_pred CCEEEEEECCCHHHHH---HHHHHHHHCCCEEEEEEEECCC
Q ss_conf 7789999147725999---9999987189869999945787
Q gi|254780234|r 5 VKKVVLAYSGGLDTSI---ILKWLQVEKGLEVIVFIADLGQ 42 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv---~i~~L~~e~g~eVi~~~~d~Gq 42 (404)
||||+|+.||+--.-+ ++..|+ +.|++|..+.-+-++
T Consensus 1 MkrI~lgITGasga~~a~~l~~~L~-k~g~~V~vv~T~~A~ 40 (189)
T 2ejb_A 1 MQKIALCITGASGVIYGIKLLQVLE-ELDFSVDLVISRNAK 40 (189)
T ss_dssp CCEEEEEECSSTTHHHHHHHHHHHH-HTTCEEEEEECHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHH-HCCCEEEEEECCCHH
T ss_conf 9889999742899999999999999-789979999642145
No 68
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=62.26 E-value=7.4 Score=17.72 Aligned_cols=114 Identities=19% Similarity=0.202 Sum_probs=51.5
Q ss_pred CCCEEEEE--ECCCHHHHHHHHHHHHHCCCEEEEEEEE-----CCCCCHHHHHHHHHHHCCCEEEEEECHHHH-HHHHHH
Q ss_conf 77789999--1477259999999987189869999945-----787110689999999739807998200899-999879
Q gi|254780234|r 4 DVKKVVLA--YSGGLDTSIILKWLQVEKGLEVIVFIAD-----LGQGEELKIASDKARLLGAKEVYVKDLRRE-FVRDFV 75 (404)
Q Consensus 4 ~~kkVvla--ySGGLDTSv~i~~L~~e~g~eVi~~~~d-----~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~e-f~~~~i 75 (404)
.|||++|- -+|=+- |.++..|. +.|++|+++.-+ .+.-+.+......-..-.. +++..|+++. .+.+ +
T Consensus 22 ~Mkk~~LITGatGfIG-s~l~~~Ll-~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~Dl~d~~~l~~-~ 97 (375)
T 1t2a_A 22 HMRNVALITGITGQDG-SYLAEFLL-EKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNM-KLHYGDLTDSTCLVK-I 97 (375)
T ss_dssp --CCEEEEETTTSHHH-HHHHHHHH-HTTCEEEEEECCCSSCCCTTTGGGC---------CE-EEEECCTTCHHHHHH-H
T ss_pred CCCCEEEEECCCCHHH-HHHHHHHH-HCCCEEEEEECCCCCCCHHHHHHHHHCHHHHCCCCC-EEEECCCCCHHHHHH-H
T ss_conf 7987699960862899-99999999-784989999798755551238887546465424780-899841578688788-8
Q ss_pred HHHHHCCCCC-CCCCC-CCCCHHHHHH--------HHHHHHHHHHCCCC---EEECHHH
Q ss_conf 9997368654-78742-0130124335--------99999998856892---8750011
Q gi|254780234|r 76 FPMFRANALY-EGYYL-LGTAIARPLI--------AKYLVDIANETGAD---AIAHGST 121 (404)
Q Consensus 76 ~~~I~ana~Y-eg~Yp-l~tslaRpli--------a~~lv~~a~~~ga~---~iaHG~T 121 (404)
+...+....+ ..-.. ...+...+.. ...+++.|++.+.. -+-+-||
T Consensus 98 ~~~~~~~~v~~~aa~~~~~~s~~~~~~~~~~Nv~gT~nll~~~~~~~~~~~~rfi~~SS 156 (375)
T 1t2a_A 98 INEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 156 (375)
T ss_dssp HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred HHHCCCCCEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 86238740132001256521430707777879999999999999818988878999603
No 69
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=62.00 E-value=7.5 Score=17.69 Aligned_cols=64 Identities=16% Similarity=0.010 Sum_probs=36.9
Q ss_pred CEEEEEECCCHHHHHHHHHH---H------HHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHH
Q ss_conf 78999914772599999999---8------718986999994578711068999999973980799820089999987
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWL---Q------VEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDF 74 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L---~------~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~ 74 (404)
|+|||.|--+-.|++|..=| + .+.|++|+++.+| +.+..++-+.+.|..--.+.|...++++.|
T Consensus 52 K~vVL~Fyp~~~tp~C~~el~~~~~~~~~~~~~g~~Vv~IS~d-----~~~~~~~~~~~~~l~fpllsD~~~~v~k~y 124 (179)
T 3ixr_A 52 QWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD-----SVKSHDSFCAKQGFTFPLVSDSDAILCKAF 124 (179)
T ss_dssp SEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC-----CHHHHHHHHHHHTCCSCEEECTTCHHHHHT
T ss_pred CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCC-----CHHHHHHHHCCCEEEEEEEECCCCHHHHHC
T ss_conf 9799999899999945899999998665553278379851678-----888898640362157876447985389984
No 70
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=61.82 E-value=7.5 Score=17.66 Aligned_cols=275 Identities=16% Similarity=0.129 Sum_probs=119.6
Q ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEE-CCCCCHHHHHHHHHHHCCCEEEEEECHHHH-HHHHHHHHHHH
Q ss_conf 7777899991477259999999987189869999945-787110689999999739807998200899-99987999973
Q gi|254780234|r 3 RDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIAD-LGQGEELKIASDKARLLGAKEVYVKDLRRE-FVRDFVFPMFR 80 (404)
Q Consensus 3 ~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d-~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~e-f~~~~i~~~I~ 80 (404)
..||||++-=..|.--|.++.+|. ++|++|+++.-. .+..+.+. .....+++..|+++. .+++ ++....
T Consensus 19 ~~MkkVLVTGasGfiG~~lv~~L~-~~g~~V~~id~~~~~~~~~l~-------~~~~i~~~~~Di~d~~~~~~-~~~~~~ 89 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLL-ERGDKVVGIDNFATGRREHLK-------DHPNLTFVEGSIADHALVNQ-LIGDLQ 89 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSSCCGGGSC-------CCTTEEEEECCTTCHHHHHH-HHHHHC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCCCCHHHHC-------CCCCCEEEEEECCCHHHHHH-HHHHCC
T ss_conf 997879990788789999999999-782989999799856787751-------48994899821679899999-975148
Q ss_pred C-----C-CCCCCC-CCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC-
Q ss_conf 6-----8-654787-4201301243359999999885689287500111682156799999985879707744100687-
Q gi|254780234|r 81 A-----N-ALYEGY-YLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSF- 152 (404)
Q Consensus 81 a-----n-a~Yeg~-Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~- 152 (404)
. . +.+... .+...-..-..-.+.+++.+++.++.-+-+.+|..-.....+ ......-.|......
T Consensus 90 ~~~v~~~aa~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~v~k~i~~sS~~~~~~~~~-------~~~~~~~~~~~~~~~~ 162 (333)
T 2q1w_A 90 PDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPI-------QQPVRLDHPRNPANSS 162 (333)
T ss_dssp CSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCC-------SSSBCTTSCCCCTTCH
T ss_pred CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCC-------CCCCCCCCCCCCCCHH
T ss_conf 755886103023563101136689999999999999819997999612269842324-------6775311345755304
Q ss_pred --CCHHHHHHHHHHHCCCCCCCCCCCCCCCCC------HHHHCCCCCCCCCCCCCC----CCCHHHCCCCCCHHHCCCCC
Q ss_conf --637999999997089675665678864157------243115457632458457----68201001465812279996
Q gi|254780234|r 153 --KGRQDLIDFAEKHAIPIDKNKRGEAPFSID------TNLLHSSSEGRVLEDPSQ----PAPEYVYKMIVSPEEAPDTP 220 (404)
Q Consensus 153 --~sRe~~i~ya~~~gIpv~~~~~~~~~yS~D------~Nlwg~S~Egg~Ledp~~----~~pe~~~~~t~~p~~ap~~p 220 (404)
.+....-.|++++|+++..-. ....|.-. ..+.-.-..+..+..... -.-+|+-.......+.+
T Consensus 163 ~~~sk~~~e~~~~~~~~~~~ilR-~~~vyGp~~~~~~~~~~i~~~~~g~~~~~g~~~r~~i~v~D~a~a~~~~~~~~--- 238 (333)
T 2q1w_A 163 YAISKSANEDYLEYSGLDFVTFR-LANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGV--- 238 (333)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEE-ESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHCCCCEEEEE-ECCEECCCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHCC---
T ss_conf 67775227899998299479862-14388899986665520013224842041564556650899999999997178---
Q ss_pred EEEEEEEECCEEEEE-CCEECCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCH
Q ss_conf 389999950247875-1623189999999988864216374100077320210001113737899999999998650899
Q gi|254780234|r 221 TTIRIDFQRGDPIAI-NGQVMSPEVLLEQLNQYGRCNGIGRIDIVENRFVGIKSRGVYETPGGTILLHAHRAIESISLDS 299 (404)
Q Consensus 221 e~v~I~Fe~G~PVai-nG~~~~~~~li~~LN~igg~~GvGr~d~vEnr~vG~KsR~vYEaPga~iL~~Ahr~LE~~~l~~ 299 (404)
.+.+.-| +|+..+..|+++.+.++.|....-..+ .+...-.|.| ...+|-
T Consensus 239 --------~~~~~ni~~~~~~si~el~~~i~~~~g~~~~~~~~--------~~~~~~~~~~-------------~~~~d~ 289 (333)
T 2q1w_A 239 --------GHGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPE--------IRELGPDDAP-------------SILLDP 289 (333)
T ss_dssp --------CCEEEECSCSCCEEHHHHHHHHHHHTTCSSCCCCE--------EEECCTTSCC-------------CCCBCC
T ss_pred --------CCCCEEECCCCCEEHHHHHHHHHHHHCCCCCCEEE--------ECCCCCCCCC-------------EEEECH
T ss_conf --------88961856999764999999999997899862474--------2578999988-------------775778
Q ss_pred HHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHCC
Q ss_conf 9999999999999998753514--698999999999997233
Q gi|254780234|r 300 GSAHLKDDLMSRYASIVYQGFW--FSPEREMLQALIDKSQEY 339 (404)
Q Consensus 300 ~~~~~K~~~~~~~a~lvy~G~w--f~p~~~~l~a~i~~~q~~ 339 (404)
.++++.+ | | +.|+.+.|..+|++-+++
T Consensus 290 --~K~~~~l----------G-w~p~~~l~e~l~~ti~w~k~~ 318 (333)
T 2q1w_A 290 --SRTIQDF----------G-KIEFTPLKETVAAAVAYFREY 318 (333)
T ss_dssp --HHHHHHH----------C-CCCCCCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHH----------C-CCCCCCHHHHHHHHHHHHHHH
T ss_conf --9999984----------9-998988999999999999981
No 71
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for structural proteomics; NMR {Agrobacterium tumefaciens str}
Probab=61.66 E-value=2.6 Score=20.99 Aligned_cols=22 Identities=14% Similarity=0.297 Sum_probs=17.7
Q ss_pred CCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 8763799999999708967566
Q gi|254780234|r 151 SFKGRQDLIDFAEKHAIPIDKN 172 (404)
Q Consensus 151 ~~~sRe~~i~ya~~~gIpv~~~ 172 (404)
.|.++|+.|+||+++||+..+.
T Consensus 57 ~F~skE~Ai~yA~k~g~~y~V~ 78 (106)
T 2jya_A 57 TFETQEQAEAYAQRKGIEYRVI 78 (106)
T ss_dssp EESSHHHHHHHHHHHTCEEEEC
T ss_pred EECCHHHHHHHHHHCCCEEEEE
T ss_conf 7589999999999869839997
No 72
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=61.65 E-value=7.6 Score=17.64 Aligned_cols=79 Identities=15% Similarity=0.039 Sum_probs=40.6
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHH------HHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHH
Q ss_conf 98777789999147725999999998------718986999994578711068999999973980799820089999987
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQ------VEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDF 74 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~------~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~ 74 (404)
||-+-|||.+...+ +|..+...+++ ++.|++++.+..+ +..+.....-+.+..-|..-.++.....+.....
T Consensus 1 ~s~~gk~Ig~i~~~-~~~~f~~~~~~g~~~~a~~~G~~~~~~~~~-~d~~~q~~~i~~~i~~~vDgiIi~~~~~~~~~~~ 78 (291)
T 3l49_A 1 MSLEGKTIGITAIG-TDHDWDLKAYQAQIAEIERLGGTAIALDAG-RNDQTQVSQIQTLIAQKPDAIIEQLGNLDVLNPW 78 (291)
T ss_dssp -CCTTCEEEEEESC-CSSHHHHHHHHHHHHHHHHTTCEEEEEECT-TCHHHHHHHHHHHHHHCCSEEEEESSCHHHHHHH
T ss_pred CCCCCCEEEEEECC-CCCHHHHHHHHHHHHHHHHCCCEEEEEECC-CCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH
T ss_conf 99889999999589-998899999999999999749999999389-9999999999999974999999778640315899
Q ss_pred HHHHHHC
Q ss_conf 9999736
Q gi|254780234|r 75 VFPMFRA 81 (404)
Q Consensus 75 i~~~I~a 81 (404)
+..+..+
T Consensus 79 l~~~~~~ 85 (291)
T 3l49_A 79 LQKINDA 85 (291)
T ss_dssp HHHHHHT
T ss_pred HHHHHHC
T ss_conf 9999986
No 73
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=60.73 E-value=7.9 Score=17.53 Aligned_cols=125 Identities=13% Similarity=0.002 Sum_probs=68.5
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEC------------CCCCHHHHHHHHHHHCCCEEEEEECHHH
Q ss_conf 9877778999914772599999999871898699999457------------8711068999999973980799820089
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADL------------GQGEELKIASDKARLLGAKEVYVKDLRR 68 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~------------Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ 68 (404)
|+.+|-||.+.=-|+.-...-++-|+...+.++++++ |. |...-.+++++-...... +.+++=.-.
T Consensus 1 m~m~~irigiiG~G~~~~~~h~~~l~~~~~~~lvav~-d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~i-D~V~I~tp~ 78 (359)
T 3m2t_A 1 MSLSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAAC-DSDLERARRVHRFISDIPVLDNVPAMLNQVPL-DAVVMAGPP 78 (359)
T ss_dssp --CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEE-CSSHHHHGGGGGTSCSCCEESSHHHHHHHSCC-SEEEECSCH
T ss_pred CCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEE-CCCHHHHHHHHHHCCCCCEECCHHHHHCCCCC-CEEEECCCH
T ss_conf 9853628999917199999999999839995899998-89999999999884998531899999659999-989987863
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHH
Q ss_conf 999987999973686547874201301243359999999885689287500111682156799999985
Q gi|254780234|r 69 EFVRDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSL 137 (404)
Q Consensus 69 ef~~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l 137 (404)
.+-.+++..+++++----=.=|++++++ -++.+++.|++.|...... -+.||+-.++.+
T Consensus 79 ~~H~~~~~~al~~Gk~V~~EKP~a~~~~---ea~~l~~~a~~~~~~~~v~-------~~~R~~p~~~~~ 137 (359)
T 3m2t_A 79 QLHFEMGLLAMSKGVNVFVEKPPCATLE---ELETLIDAARRSDVVSGVG-------MNFKFARPVRQL 137 (359)
T ss_dssp HHHHHHHHHHHHTTCEEEECSCSCSSHH---HHHHHHHHHHHHTCCEEEC-------CHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHH---HHHHHHHHHHHCCCCCCCC-------CCEEHHHHHHHH
T ss_conf 5435899999843980999853303179---9999886654113343342-------000003578999
No 74
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=59.72 E-value=8.2 Score=17.41 Aligned_cols=113 Identities=8% Similarity=0.065 Sum_probs=62.1
Q ss_pred CCCCCEEEEEECCCHHHHHHHHHH---HHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHH-------
Q ss_conf 877778999914772599999999---8718986999994578711068999999973980799820089999-------
Q gi|254780234|r 2 SRDVKKVVLAYSGGLDTSIILKWL---QVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFV------- 71 (404)
Q Consensus 2 ~~~~kkVvlaySGGLDTSv~i~~L---~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~------- 71 (404)
|.-||||++|.-|-=+|--++.|. ...++.+++.+++-- +...........+.. ...+..+++.
T Consensus 1 ~~~mk~ILv~~D~s~~s~~al~~A~~la~~~~a~l~llhv~~----~~~~~~~~~~~~~~~--~~~~~~e~~~~~~~~~l 74 (138)
T 1q77_A 1 SNAMKVLLVLTDAYSDCEKAITYAVNFSEKLGAELDILAVLE----DVYNLERANVTFGLP--FPPEIKEESKKRIERRL 74 (138)
T ss_dssp CCCCEEEEEEESTTCCCHHHHHHHHHHHTTTCCEEEEEEECH----HHHHHHHHHHHHCCC--CCTHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECC----CCCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHH
T ss_conf 986799999980998999999999998877398459999724----621132101235776--41889999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCH
Q ss_conf 9879999736865478742013012433599999998856892875001116821
Q gi|254780234|r 72 RDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGND 126 (404)
Q Consensus 72 ~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGND 126 (404)
++.+...-..+...+ +-+..-=.++.+++++++.++|.|-=||.|++--
T Consensus 75 ~~~~~~~~~~~~~~~------~~v~~G~~~~~I~~~a~e~~~DlIVmG~~~~~~l 123 (138)
T 1q77_A 75 REVWEKLTGSTEIPG------VEYRIGPLSEEVKKFVEGKGYELVVWACYPSAYL 123 (138)
T ss_dssp HHHHHHHHSCCCCCC------EEEECSCHHHHHHHHHTTSCCSEEEECSCCGGGT
T ss_pred HHHHHHHHCCCCEEE------EECCCCCHHHHHHHHHHHCCCCEEEECCCCCCHH
T ss_conf 999998423562278------7313699899999999974999999928998568
No 75
>3brs_A Periplasmic binding protein/LACI transcriptional regulator; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans isdg}
Probab=59.04 E-value=8.4 Score=17.34 Aligned_cols=66 Identities=12% Similarity=-0.041 Sum_probs=26.5
Q ss_pred HHHHHHHHHHCCCCEEECHHHCCC--CHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 999999988568928750011168--215679999998587970774410068763799999999708967
Q gi|254780234|r 101 AKYLVDIANETGADAIAHGSTGKG--NDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQDLIDFAEKHAIPI 169 (404)
Q Consensus 101 a~~lv~~a~~~ga~~iaHG~TgkG--NDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv 169 (404)
.+.+-+.|++.|.+.+-.++++.+ ..|.+.=..+.+..|+.-|+.|.-. ..-...++.+.+.|||+
T Consensus 26 ~~G~~~aa~~~g~~~~~~~~~~~~d~~~q~~~i~~li~~~~dgIii~~~~~---~~~~~~l~~a~~~gIpv 93 (289)
T 3brs_A 26 VEGAQMAAKEYEIKLEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAADY---EKTYDAAKEIKDAGIKL 93 (289)
T ss_dssp HHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHTCCSEEEECCSCT---TTTHHHHTTTGGGTCEE
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCH---HHHHHHHHHHHHCCCCE
T ss_conf 999999999829989999689988999999999999976999999968841---53699999999759987
No 76
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=58.37 E-value=5.3 Score=18.77 Aligned_cols=36 Identities=33% Similarity=0.526 Sum_probs=24.8
Q ss_pred CCCCCCEEEEEE-CCCHHHHHHHHHHHHHCCCEEEEEEEE
Q ss_conf 987777899991-477259999999987189869999945
Q gi|254780234|r 1 MSRDVKKVVLAY-SGGLDTSIILKWLQVEKGLEVIVFIAD 39 (404)
Q Consensus 1 M~~~~kkVvlay-SGGLDTSv~i~~L~~e~g~eVi~~~~d 39 (404)
|++ |+||++.= +|++-+.++-.++ +.|++|++++=+
T Consensus 1 m~~-m~KIlItGatG~iG~~l~~~Ll--~~g~~V~~l~R~ 37 (227)
T 3dhn_A 1 MEK-VKKIVLIGASGFVGSALLNEAL--NRGFEVTAVVRH 37 (227)
T ss_dssp --C-CCEEEEETCCHHHHHHHHHHHH--TTTCEEEEECSC
T ss_pred CCC-CCEEEEECCCCHHHHHHHHHHH--HCCCEEEEEECC
T ss_conf 999-9999998899889999999999--784989999868
No 77
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=58.32 E-value=8.6 Score=17.25 Aligned_cols=219 Identities=17% Similarity=0.163 Sum_probs=99.7
Q ss_pred CCCCCCEE-EEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHH
Q ss_conf 98777789-99914772599999999871898699999457871106899999997398079982008999998799997
Q gi|254780234|r 1 MSRDVKKV-VLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMF 79 (404)
Q Consensus 1 M~~~~kkV-vlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I 79 (404)
|++. |+| |+.=+|.+-+.++-.++ ++.+++|+++.=+.-... .+.....|+ +++..|+.+. +-+..++
T Consensus 2 M~~~-k~ILVtGatG~iG~~lv~~Ll-~~g~~~V~~l~R~~~~~~-----~~~l~~~~v-~~v~~D~~~~---~~~~~a~ 70 (299)
T 2wm3_A 2 MVDK-KLVVVFGGTGAQGGSVARTLL-EDGTFKVRVVTRNPRKKA-----AKELRLQGA-EVVQGDQDDQ---VIMELAL 70 (299)
T ss_dssp --CC-CEEEEETTTSHHHHHHHHHHH-HHCSSEEEEEESCTTSHH-----HHHHHHTTC-EEEECCTTCH---HHHHHHH
T ss_pred CCCC-CEEEEECCCCHHHHHHHHHHH-HCCCCEEEEEECCCCHHH-----HHHHHCCCC-EEEEEECCCC---CCCCCCC
T ss_conf 9999-889998998889999999999-589971999986853010-----134401897-8999443563---0011236
Q ss_pred -HCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHH
Q ss_conf -368654787--42013012433599999998856892875001116821567999999858797077441006876379
Q gi|254780234|r 80 -RANALYEGY--YLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQ 156 (404)
Q Consensus 80 -~ana~Yeg~--Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe 156 (404)
.+.+.+--. .+....-.-+.....+++.|+..|...+-+.++..-. .. +.. |..........
T Consensus 71 ~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~aa~~~g~~~~v~~s~~~~~----------~~-~~~----~~~~~~~~~~~ 135 (299)
T 2wm3_A 71 NGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIK----------KL-TAG----RLAAAHFDGKG 135 (299)
T ss_dssp TTCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHH----------HH-TTT----SCCCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC----------CC-CCC----CCCCHHHHHHH
T ss_conf 7754899857777643112556889999999998599679982354566----------78-766----54302444455
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC-C--CC-CCHHHCCCCCCHHHCC-------CCCEEEEE
Q ss_conf 999999970896756656788641572431154576324584-5--76-8201001465812279-------99638999
Q gi|254780234|r 157 DLIDFAEKHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDP-S--QP-APEYVYKMIVSPEEAP-------DTPTTIRI 225 (404)
Q Consensus 157 ~~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp-~--~~-~pe~~~~~t~~p~~ap-------~~pe~v~I 225 (404)
...+|.+++|++...-. .+.-. .|.++.-.---..... . .. .++..+.|+ +..+.- +.|..
T Consensus 136 ~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~d~~~~~~~~l~~~~~--- 207 (299)
T 2wm3_A 136 EVEEYFRDIGVPMTSVR---LPCYF-ENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGM-SVSDLGPVVLSLLKMPEK--- 207 (299)
T ss_dssp HHHHHHHHHTCCEEEEE---CCEEG-GGGGTTTCCEECTTSSSEEECCCCTTSCEEEE-CGGGHHHHHHHHHHSHHH---
T ss_pred HHHHHHHHCCCCEEEEE---ECEEE-CCCHHHHHHHHHHCCCCEEEECCCCCCCCCEE-EEHHHHHHHHHHHHCCHH---
T ss_conf 48999985189628996---05554-27324431234303650376226688642336-501389999999829232---
Q ss_pred EEECCEEEEECCEECCHHHHHHHHHHHHHH
Q ss_conf 995024787516231899999999888642
Q gi|254780234|r 226 DFQRGDPIAINGQVMSPEVLLEQLNQYGRC 255 (404)
Q Consensus 226 ~Fe~G~PVainG~~~~~~~li~~LN~igg~ 255 (404)
..|....+.|+..+.-++.+.+.+..|+
T Consensus 208 --~~g~~~~i~g~~~t~~e~~~~i~~~~G~ 235 (299)
T 2wm3_A 208 --YVGQNIGLSTCRHTAEEYAALLTKHTRK 235 (299)
T ss_dssp --HTTCEEECCSEEECHHHHHHHHHHHHSS
T ss_pred --HCCEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf --2996999679977899999999999889
No 78
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=56.87 E-value=9.1 Score=17.09 Aligned_cols=109 Identities=19% Similarity=0.262 Sum_probs=54.9
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 98777789999147725999999998718986999994578711068999999973980799820089999987999973
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFR 80 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ 80 (404)
|+++| ||.+-=+.|.=-|.++..|. +.|++|+++ |........ -...+. ++...|.++. +-++.++.
T Consensus 26 ~~~~M-KILVTGatGfIGs~Lv~~L~-~~g~~Vi~~--d~~~~~~~~-----~~~~~~-~~~~~Di~~~---~~~~~~~~ 92 (379)
T 2c5a_A 26 PSENL-KISITGAGGFIASHIARRLK-HEGHYVIAS--DWKKNEHMT-----EDMFCD-EFHLVDLRVM---ENCLKVTE 92 (379)
T ss_dssp TTSCC-EEEEETTTSHHHHHHHHHHH-HTTCEEEEE--ESSCCSSSC-----GGGTCS-EEEECCTTSH---HHHHHHHT
T ss_pred CCCCC-EEEEECCCCHHHHHHHHHHH-HCCCEEEEE--ECCCCCCHH-----HHCCCC-CEEEEECHHH---HHHHHHHC
T ss_conf 77999-79998999889999999999-783989999--689853213-----423667-4799121428---99998861
Q ss_pred -CCCCCC-----CC------CCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHC
Q ss_conf -686547-----87------4201301243359999999885689287500111
Q gi|254780234|r 81 -ANALYE-----GY------YLLGTAIARPLIAKYLVDIANETGADAIAHGSTG 122 (404)
Q Consensus 81 -ana~Ye-----g~------Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~Tg 122 (404)
..+.+. .. ++.-..-.-......+++.+++.++..+-+.+|.
T Consensus 93 ~~D~VihlA~~~~~~~~~~~~~~~~~~~N~~gt~~lle~~~~~~~~~~i~~SS~ 146 (379)
T 2c5a_A 93 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSA 146 (379)
T ss_dssp TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred CCCEEEECCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 899999975320133421000100134422657999998775212437762243
No 79
>2hun_A 336AA long hypothetical DTDP-glucose 4,6- dehydratase; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii OT3}
Probab=55.79 E-value=9.4 Score=16.97 Aligned_cols=159 Identities=14% Similarity=0.087 Sum_probs=68.2
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 98777789999147725999999998718986999994578711068999999973980799820089999987999973
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFR 80 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ 80 (404)
|.+ ||=+|..-+|=+-+.++-.+++...+++|+++. +...+.....++. .....-.+++..|+++.-..+-++. +
T Consensus 1 ~~~-MkILITGatGfiG~~l~~~L~~~~~~~~V~~~d-~~~~~~~~~~~~~-~~~~~~~~~i~~Di~~~~~~~~~~~--~ 75 (336)
T 2hun_A 1 MHS-MKLLVTGGMGFIGSNFIRYILEKHPDWEVINID-KLGYGSNPANLKD-LEDDPRYTFVKGDVADYELVKELVR--K 75 (336)
T ss_dssp --C-CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE-CCCTTCCGGGGTT-TTTCTTEEEEECCTTCHHHHHHHHH--T
T ss_pred CCC-CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEE-CCCCCCCHHHHHH-HHCCCCEEEEECCCCCHHHHHHHHH--C
T ss_conf 999-889998788789999999999669997899996-7987877788997-6307974999740557687678875--5
Q ss_pred CCCCCC-CCCCC-CCCHHHHH--------HHHHHHHHHHHCCCC-EEECHHHCCC---CHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 686547-87420-13012433--------599999998856892-8750011168---2156799999985879707744
Q gi|254780234|r 81 ANALYE-GYYLL-GTAIARPL--------IAKYLVDIANETGAD-AIAHGSTGKG---NDQVRFELSAYSLNSDIEIIAP 146 (404)
Q Consensus 81 ana~Ye-g~Ypl-~tslaRpl--------ia~~lv~~a~~~ga~-~iaHG~TgkG---NDQvRFe~~~~~l~P~l~viaP 146 (404)
....+. ..++. ..+...|. ....+++.|++.|+. .+-+.||..- +....+ .+-....|
T Consensus 76 ~d~vihlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~SS~~vy~~~~~~~~--------~E~~~~~p 147 (336)
T 2hun_A 76 VDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSF--------TENDRLMP 147 (336)
T ss_dssp CSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCB--------CTTBCCCC
T ss_pred CCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCC--------CCCCCCCC
T ss_conf 5705898551462265519999999999999999999998699879999056664488878998--------99898999
Q ss_pred ECCC---CCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 1006---8763799999999708967566
Q gi|254780234|r 147 WRHW---SFKGRQDLIDFAEKHAIPIDKN 172 (404)
Q Consensus 147 ~Rd~---~~~sRe~~i~ya~~~gIpv~~~ 172 (404)
.-.. ...+......|++++|+++..-
T Consensus 148 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~l 176 (336)
T 2hun_A 148 SSPYSATKAASDMLVLGWTRTYNLNASIT 176 (336)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 98679999999999999999839988999
No 80
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehydrogenase, reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=54.66 E-value=9.8 Score=16.84 Aligned_cols=217 Identities=15% Similarity=0.116 Sum_probs=101.3
Q ss_pred CCCCCCEE-EEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHH
Q ss_conf 98777789-99914772599999999871898699999457871106899999997398079982008999998799997
Q gi|254780234|r 1 MSRDVKKV-VLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMF 79 (404)
Q Consensus 1 M~~~~kkV-vlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I 79 (404)
||+.+|.| |+.=+|.+-++++-.+| +.|++|++++=|..... ..+-...-|+ +.+..|+.+.- +.+..+.
T Consensus 1 M~~~kktIlVtGaTG~iG~~lv~~Ll--~~G~~V~~l~R~~~~~~----~~~l~~~~gv-~~~~gD~~d~~--~~~~~~~ 71 (352)
T 1xgk_A 1 MAQQKKTIAVVGATGRQGASLIRVAA--AVGHHVRAQVHSLKGLI----AEELQAIPNV-TLFQGPLLNNV--PLMDTLF 71 (352)
T ss_dssp --CCCCCEEEESTTSHHHHHHHHHHH--HTTCCEEEEESCSCSHH----HHHHHTSTTE-EEEESCCTTCH--HHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHH--HCCCEEEEEECCCCCCC----HHHCCCCCCC-EEEEEECCCCH--HHHHHHH
T ss_conf 99999989998997189999999999--58995999977853001----2340114898-89997589958--8999987
Q ss_pred H-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHH
Q ss_conf 3-686547874201301243359999999885689287500111682156799999985879707744100687637999
Q gi|254780234|r 80 R-ANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQDL 158 (404)
Q Consensus 80 ~-ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~~ 158 (404)
. +.+.+....+. +.......+.+++.+.+.|..-+-+-++...+.. .+..... ..+.+....
T Consensus 72 ~g~~~v~~~~~~~--~~~~~~~~~~~~~aa~~~g~~~~~~~Ss~~~~~~----------~~~~~~~-----~~~~~k~~~ 134 (352)
T 1xgk_A 72 EGAHLAFINTTSQ--AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSL----------YGPWPAV-----PMWAPKFTV 134 (352)
T ss_dssp TTCSEEEECCCST--TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGG----------TSSCCCC-----TTTHHHHHH
T ss_pred CCCCEEEECCCCH--HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC----------CCCCCCC-----HHHHHHHHH
T ss_conf 5885899746721--1123467899999999809960999940223456----------7775553-----045778999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCC---CCCCCCCCCCCCCHHHCCCCCCHHHCCCCCEEEE-----------
Q ss_conf 99999708967566567886415724311545---7632458457682010014658122799963899-----------
Q gi|254780234|r 159 IDFAEKHAIPIDKNKRGEAPFSIDTNLLHSSS---EGRVLEDPSQPAPEYVYKMIVSPEEAPDTPTTIR----------- 224 (404)
Q Consensus 159 i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~---Egg~Ledp~~~~pe~~~~~t~~p~~ap~~pe~v~----------- 224 (404)
.+|.++.+++...-. |--.-+|+.+.-. ...... ...+.+..+ -.++.+-...
T Consensus 135 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~--~~~~~~~~~i~~~~Dva~~v~ 201 (352)
T 1xgk_A 135 ENYVRQLGLPSTFVY----AGIYNNNFTSLPYPLFQMELMP-------DGTFEWHAP--FDPDIPLPWLDAEHDVGPALL 201 (352)
T ss_dssp HHHHHTSSSCEEEEE----ECEEGGGCBSSSCSSCBEEECT-------TSCEEEEES--SCTTSCEEEECHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEE----EEEEECCCCCCCCCCCCCCCCC-------CCCEEEEEC--CCCCCCCCEEEHHHHHHHHHH
T ss_conf 999985489879996----5475224322343112333222-------562256513--689863022523999999999
Q ss_pred EEEE------CCEEEEECCEECCHHHHHHHHHHHHHHC
Q ss_conf 9995------0247875162318999999998886421
Q gi|254780234|r 225 IDFQ------RGDPIAINGQVMSPEVLLEQLNQYGRCN 256 (404)
Q Consensus 225 I~Fe------~G~PVainG~~~~~~~li~~LN~igg~~ 256 (404)
--++ .|.-+-+.|+.++..|+++.+.+..|+-
T Consensus 202 ~~l~~~~~~~~g~~~~~~~~~~t~~ei~~~~~~~~G~~ 239 (352)
T 1xgk_A 202 QIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRR 239 (352)
T ss_dssp HHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTSC
T ss_pred HHHHCCCHHCCCEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 99857803019979995699868999999999998898
No 81
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=54.28 E-value=9.9 Score=16.80 Aligned_cols=308 Identities=12% Similarity=0.037 Sum_probs=127.3
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEC----CCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHH
Q ss_conf 9877778999914772599999999871898699999457----871106899999997398079982008999998799
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADL----GQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVF 76 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~----Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~ 76 (404)
|++ ||||++-=..|.=-|.++.+|. +.|++|..+..|- +....++.+. .-+ .+++..|+++.- .+.
T Consensus 1 m~~-~k~ILITG~tGfiG~~l~~~Ll-~~g~~v~v~~~d~~~~~~~~~~~~~~~----~~~-~~~~~~Dl~d~~---~~~ 70 (348)
T 1oc2_A 1 MSQ-FKNIIVTGGAGFIGSNFVHYVY-NNHPDVHVTVLDKLTYAGNKANLEAIL----GDR-VELVVGDIADAE---LVD 70 (348)
T ss_dssp --C-CSEEEEETTTSHHHHHHHHHHH-HHCTTCEEEEEECCCTTCCGGGTGGGC----SSS-EEEEECCTTCHH---HHH
T ss_pred CCC-CCEEEEECCCCHHHHHHHHHHH-HCCCCEEEEEEECCCCCCCHHHHHHHH----CCC-CEEEECCCCCHH---HHH
T ss_conf 999-9889994788689999999999-779973999983787434477788861----588-089976278989---999
Q ss_pred HHHHCC-CCCCC-CC-CCCCCHHHHH--------HHHHHHHHHHHCCCCEEECHHH-CCCCHHHHHHHHHHHHCCC--CE
Q ss_conf 997368-65478-74-2013012433--------5999999988568928750011-1682156799999985879--70
Q gi|254780234|r 77 PMFRAN-ALYEG-YY-LLGTAIARPL--------IAKYLVDIANETGADAIAHGST-GKGNDQVRFELSAYSLNSD--IE 142 (404)
Q Consensus 77 ~~I~an-a~Yeg-~Y-pl~tslaRpl--------ia~~lv~~a~~~ga~~iaHG~T-gkGNDQvRFe~~~~~l~P~--l~ 142 (404)
.++... ..+-- .+ ....+...|. -...+++.++..++..+--++. -.|+...+-+.....-.|+ ..
T Consensus 71 ~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~Nv~g~~~~l~~~~~~~~k~i~~sss~vyg~~~~~e~~~~~~~~~~~~~~ 150 (348)
T 1oc2_A 71 KLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFT 150 (348)
T ss_dssp HHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBC
T ss_pred HHHCCCCEEEHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 87616875414245403221554846542318999999999987513441122200146677765456644567666656
Q ss_pred EEEEECCCC------CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCH---HHHC----CCCCCCCCC---CCCC----CC
Q ss_conf 774410068------76379999999970896756656788641572---4311----545763245---8457----68
Q gi|254780234|r 143 IIAPWRHWS------FKGRQDLIDFAEKHAIPIDKNKRGEAPFSIDT---NLLH----SSSEGRVLE---DPSQ----PA 202 (404)
Q Consensus 143 viaP~Rd~~------~~sRe~~i~ya~~~gIpv~~~~~~~~~yS~D~---Nlwg----~S~Egg~Le---dp~~----~~ 202 (404)
--.|.+-.+ +.+......|++++|+++..-. ....|.-.. ..+. ....+..+. +..+ --
T Consensus 151 e~~~~~P~s~Y~~sK~~~E~~~~~~~~~~~~~~~ilR-~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~r~fi~ 229 (348)
T 1oc2_A 151 AETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISN-CSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIH 229 (348)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEE-ECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE-ECCEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEE
T ss_conf 6788898997999999999999999997499779971-163638897754036899999980897058579985787686
Q ss_pred CHHHCCCCCCHHHCCCCCEEEEEEEECCEEEEECCEECCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHH
Q ss_conf 20100146581227999638999995024787516231899999999888642163741000773202100011137378
Q gi|254780234|r 203 PEYVYKMIVSPEEAPDTPTTIRIDFQRGDPIAINGQVMSPEVLLEQLNQYGRCNGIGRIDIVENRFVGIKSRGVYETPGG 282 (404)
Q Consensus 203 pe~~~~~t~~p~~ap~~pe~v~I~Fe~G~PVainG~~~~~~~li~~LN~igg~~GvGr~d~vEnr~vG~KsR~vYEaPga 282 (404)
-+|+-.......+.+.. .+.-.-.+|+..+..+++..+-+..+....- +..+.+|-.+...+. ..
T Consensus 230 v~D~~~ai~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~-~d---- 294 (348)
T 1oc2_A 230 TNDHSTGVWAILTKGRM---------GETYLIGADGEKNNKEVLELILEKMGQPKDA-YDHVTDRAGHDLRYA-ID---- 294 (348)
T ss_dssp HHHHHHHHHHHHHHCCT---------TCEEEECCSCEEEHHHHHHHHHHHTTCCTTC-SEEECCCTTCCCBCC-BC----
T ss_pred EHHHHHHHHHHHHHCCC---------CCCEEECCCCCCCHHHHHHHHHHHHCCCCCC-EEECCCCCCCCCEEE-EC----
T ss_conf 00899999999863045---------7761421799771899999999983899764-367899999975520-37----
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 999999999986508999999999999999998753514698999999999997233
Q gi|254780234|r 283 TILLHAHRAIESISLDSGSAHLKDDLMSRYASIVYQGFWFSPEREMLQALIDKSQEY 339 (404)
Q Consensus 283 ~iL~~Ahr~LE~~~l~~~~~~~K~~~~~~~a~lvy~G~wf~p~~~~l~a~i~~~q~~ 339 (404)
.-+|.+.|- . ......+++.+...+.-..-+=-|+.++.+++++=+++.|+-
T Consensus 295 --~~k~~~~LG-w--~P~~t~leegi~~~i~w~k~n~~~~~~~~~~~~~~~~~~~~~ 346 (348)
T 1oc2_A 295 --ASKLRDELG-W--TPQFTDFSEGLEETIQWYTDNQDWWKAEKEAVEANYAKTQEV 346 (348)
T ss_dssp --CHHHHHHHC-C--CCSCCCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCB
T ss_pred --HHHHHHHHC-C--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --899999978-9--886789999999999999987999988588887679988874
No 82
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=53.95 E-value=10 Score=16.77 Aligned_cols=40 Identities=15% Similarity=0.296 Sum_probs=29.0
Q ss_pred CCCCEEEEEECCCHHHHHHHHH-HH---HHCCCEEEEEEEECCC
Q ss_conf 7777899991477259999999-98---7189869999945787
Q gi|254780234|r 3 RDVKKVVLAYSGGLDTSIILKW-LQ---VEKGLEVIVFIADLGQ 42 (404)
Q Consensus 3 ~~~kkVvlaySGGLDTSv~i~~-L~---~e~g~eVi~~~~d~Gq 42 (404)
.++|||+++.+.|+-||..+.- |+ .+.|.++.....++.+
T Consensus 19 ~~KkkIlvvC~sGigTS~ll~~ki~~~~~~~gi~~~v~~~~~~e 62 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNE 62 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHH
T ss_conf 35318999999978999999999999999839874132303766
No 83
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, structural genomics; 2.00A {Exiguobacterium sibiricum 255-15}
Probab=51.30 E-value=11 Score=16.48 Aligned_cols=123 Identities=12% Similarity=0.157 Sum_probs=53.4
Q ss_pred EEEEEECCCHHHHHHHHHHHHH-CCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCC
Q ss_conf 8999914772599999999871-898699999457871106899999997398079982008999998799997368654
Q gi|254780234|r 7 KVVLAYSGGLDTSIILKWLQVE-KGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANALY 85 (404)
Q Consensus 7 kVvlaySGGLDTSv~i~~L~~e-~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~Y 85 (404)
..+|--|+|=..++ +.+++.. .+++|++.-.+--.+ +... +.++++++.-++ ++|
T Consensus 5 ~~ILi~~~g~~~~l-~~~~~~~~~~~~vi~~D~~~~~~---------~~~~-~D~~~~~p~~~~--~~~----------- 60 (331)
T 2pn1_A 5 PHLLITSAGRRAKL-VEYFVKEFKTGRVSTADCSPLAS---------ALYM-ADQHYIVPKIDE--VEY----------- 60 (331)
T ss_dssp CEEEEESCTTCHHH-HHHHHHHCCSSEEEEEESCTTCG---------GGGG-SSSEEECCCTTS--TTH-----------
T ss_pred CEEEEECCCHHHHH-HHHHHHCCCCCEEEEECCCCCCH---------HHHH-CCEEEECCCCCC--HHH-----------
T ss_conf 78999288618999-99999749999899988999985---------7884-598898799885--679-----------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHH-HHHHHHH-CCCCEEEEEE-CCC-CCCCHHHHHHH
Q ss_conf 787420130124335999999988568928750011168215679-9999985-8797077441-006-87637999999
Q gi|254780234|r 86 EGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRF-ELSAYSL-NSDIEIIAPW-RHW-SFKGRQDLIDF 161 (404)
Q Consensus 86 eg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRF-e~~~~~l-~P~l~viaP~-Rd~-~~~sRe~~i~y 161 (404)
...+.+++++.+.+.|-.++. +.+.+ -.....| ....+++.|= .-. ....+..+.++
T Consensus 61 ---------------~~~l~~i~~~~~id~iip~~d----~~~~~~a~~~~~l~~~g~~v~~~~~~~~~~~~dK~~~~~~ 121 (331)
T 2pn1_A 61 ---------------IDHLLTLCQDEGVTALLTLID----PELGLLAQATERFQAIGVTVIVSPYAACELCFDKYTMYEY 121 (331)
T ss_dssp ---------------HHHHHHHHHHHTCCEEEESSH----HHHHHHHHTHHHHHTTTCEECCCCHHHHHHHHBHHHHHHH
T ss_pred ---------------HHHHHHHHHHHCCCEEEECCC----HHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCHHHHHHH
T ss_conf ---------------999999999959999997886----5799999999999978998987989999987499999999
Q ss_pred HHHHCCCCCCC
Q ss_conf 99708967566
Q gi|254780234|r 162 AEKHAIPIDKN 172 (404)
Q Consensus 162 a~~~gIpv~~~ 172 (404)
++++|||+|.+
T Consensus 122 l~~~gip~p~~ 132 (331)
T 2pn1_A 122 CLRQGIAHART 132 (331)
T ss_dssp HHHHTCCCCCE
T ss_pred HHHCCCCCCCC
T ss_conf 99869983222
No 84
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=50.87 E-value=11 Score=16.43 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=12.1
Q ss_pred EEECHHHCCCCHHHHHHHHHHH--HCCCCEEE
Q ss_conf 8750011168215679999998--58797077
Q gi|254780234|r 115 AIAHGSTGKGNDQVRFELSAYS--LNSDIEII 144 (404)
Q Consensus 115 ~iaHG~TgkGNDQvRFe~~~~~--l~P~l~vi 144 (404)
++.+|..+..+.+-|....... -.|++++.
T Consensus 137 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 168 (288)
T 1gud_A 137 AIIEGKAGNASGEARRNGATEAFKKASQIKLV 168 (288)
T ss_dssp EEEECSTTCHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 86248843203789987167776513453100
No 85
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=50.63 E-value=11 Score=16.41 Aligned_cols=132 Identities=14% Similarity=0.166 Sum_probs=62.9
Q ss_pred CEEEEEECCCHHHHHHHHHHH--HHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCC
Q ss_conf 789999147725999999998--718986999994578711068999999973980799820089999987999973686
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQ--VEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANA 83 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~--~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana 83 (404)
+||+|+.||+...-.+..+++ .++|+||.++.-+-++. + +...+.+.-... .+.+..+... +.+.-+=++.+
T Consensus 3 ~kIll~vtGSiaa~k~~~li~~L~~~g~~V~vv~T~~A~~--f--v~~~~l~~~~~~-~~~~~~~~~~-~hi~l~~~aD~ 76 (181)
T 1g63_A 3 GKLLICATASINVININHYIVELKQHFDEVNILFSPSSKN--F--INTDVLKLFCDN-LYDEIKDPLL-NHINIVENHEY 76 (181)
T ss_dssp CCEEEEECSCGGGGGHHHHHHHHTTTSSCEEEEECGGGGG--T--SCGGGGGGTSSC-EECTTTCTTC-CHHHHHHTCSE
T ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEECHHHHH--H--CCHHHHHHHHCC-EEECCCCCCC-CCCHHHHHHCE
T ss_conf 7399999789999999999999997699379996089971--3--699999876131-1532655431-30010143323
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCC-CEEEEEEC---CCCCCCHHHHH
Q ss_conf 547874201301243359999999885689287500111682156799999985879-70774410---06876379999
Q gi|254780234|r 84 LYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSD-IEIIAPWR---HWSFKGRQDLI 159 (404)
Q Consensus 84 ~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~-l~viaP~R---d~~~~sRe~~i 159 (404)
.+.. |+.+..+-++|.- -..|.+- .-.|+.+ --+++|-- .|+-+.-++-+
T Consensus 77 ------~lIa----PaTaNTlaKiA~G------------iaDnllt----~~~l~~~~pvii~PaMn~~M~~~p~~~~nl 130 (181)
T 1g63_A 77 ------ILVL----PASANTINKIANG------------ICDNLLT----TVCLTGYQKLFIFPNMNIRMWGNPFLQKNI 130 (181)
T ss_dssp ------EEEE----EECHHHHHHHHTT------------CCCSHHH----HHHHHTGGGEEEEECCCHHHHTCHHHHHHH
T ss_pred ------EEEC----CCCHHHHHHHHCC------------CCCCHHH----HHHHHCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf ------6754----5898899998488------------8770777----788754997699848699998408999999
Q ss_pred HHHHHHCCCC
Q ss_conf 9999708967
Q gi|254780234|r 160 DFAEKHAIPI 169 (404)
Q Consensus 160 ~ya~~~gIpv 169 (404)
+.+++.|+-+
T Consensus 131 ~~L~~~G~~v 140 (181)
T 1g63_A 131 DLLKNNDVKV 140 (181)
T ss_dssp HHHHTTTCEE
T ss_pred HHHHHCCCEE
T ss_conf 9999789799
No 86
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=49.83 E-value=12 Score=16.32 Aligned_cols=113 Identities=19% Similarity=0.121 Sum_probs=56.8
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEE------EECCC-CCHHHHHHHHHHHCCCEEEEEECHHHHHHHH
Q ss_conf 9877778999914772599999999871898699999------45787-1106899999997398079982008999998
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFI------ADLGQ-GEELKIASDKARLLGAKEVYVKDLRREFVRD 73 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~------~d~Gq-~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~ 73 (404)
|+| ||++-=.-|.--|.++..|. +.|++|+++- ..... .+.+..... .....+ +++..|+++.-
T Consensus 1 M~k---KILITG~sGfiGs~l~~~Ll-~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~Dl~d~~--- 71 (348)
T 1ek6_A 1 MAE---KVLVTGGAGYIGSHTVLELL-EAGYLPVVIDNFHNAFRGGGSLPESLRRVQE-LTGRSV-EFEEMDILDQG--- 71 (348)
T ss_dssp CCS---EEEEETTTSHHHHHHHHHHH-HTTCCEEEEECSSSSCBCSSSSBHHHHHHHH-HHTCCC-EEEECCTTCHH---
T ss_pred CCC---EEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCCCCCCCCCCHHHHHHHHH-HCCCCC-EEEEEECCCCH---
T ss_conf 997---09997897289999999999-7859899997787422344320667888887-237883-79993556732---
Q ss_pred HHHHHHHC-C-------CCCCC-----CCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHC
Q ss_conf 79999736-8-------65478-----74201301243359999999885689287500111
Q gi|254780234|r 74 FVFPMFRA-N-------ALYEG-----YYLLGTAIARPLIAKYLVDIANETGADAIAHGSTG 122 (404)
Q Consensus 74 ~i~~~I~a-n-------a~Yeg-----~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~Tg 122 (404)
.+..+++. . |.+-+ .+|+.+--..-.....+++.+++.++.-+-+.+|.
T Consensus 72 ~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~~~~~~~~Nv~~t~~ll~~~~~~~vk~~i~~ss~ 133 (348)
T 1ek6_A 72 ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSA 133 (348)
T ss_dssp HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred HCCHHHHCCCCCEEEEEEECCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf 01002322675401220011662766769899999999999999987875287513664010
No 87
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=49.41 E-value=9.4 Score=16.99 Aligned_cols=37 Identities=24% Similarity=0.472 Sum_probs=25.6
Q ss_pred CCCEEEEEECCCHHHHHHHH-----HHHHHCCC-EEEEEEEECC
Q ss_conf 77789999147725999999-----99871898-6999994578
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILK-----WLQVEKGL-EVIVFIADLG 41 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~-----~L~~e~g~-eVi~~~~d~G 41 (404)
+|+||+++.+.|+-||.++. .|+ +.|. ++.-.++++.
T Consensus 17 ~m~KIlvvCgsGigTS~ml~~kik~~l~-e~gi~~v~v~~~~~~ 59 (110)
T 3czc_A 17 SMVKVLTACGNGMGSSMVIKMKVENALR-QLGVSDIESASCSVG 59 (110)
T ss_dssp -CEEEEEECCCCHHHHHHHHHHHHHHHH-HTTCCCEEEEEECHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHH-HCCCCEEEEEEECHH
T ss_conf 6208999999970299999999999999-859970599980177
No 88
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoid, oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=49.36 E-value=12 Score=16.27 Aligned_cols=104 Identities=9% Similarity=0.007 Sum_probs=55.0
Q ss_pred CCCCCCEEEEEE-CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHH
Q ss_conf 987777899991-4772599999999871898699999457871106899999997398079982008999998799997
Q gi|254780234|r 1 MSRDVKKVVLAY-SGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMF 79 (404)
Q Consensus 1 M~~~~kkVvlay-SGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I 79 (404)
|...++||++.= +|-+-+.++ .-|. +.|++|++++-+.....+.....+.....|+ +.+..|+.+.- .+..++
T Consensus 6 ~~~~k~KVlV~GaTG~iG~~lv-~~Ll-~~g~~V~vl~R~~~~~~~k~~~~~~l~~~gv-~~v~gD~~d~~---~l~~a~ 79 (346)
T 3i6i_A 6 VPSPKGRVLIAGATGFIGQFVA-TASL-DAHRPTYILARPGPRSPSKAKIFKALEDKGA-IIVYGLINEQE---AMEKIL 79 (346)
T ss_dssp -----CCEEEECTTSHHHHHHH-HHHH-HTTCCEEEEECSSCCCHHHHHHHHHHHHTTC-EEEECCTTCHH---HHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHH-HHHH-HCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-EEEEEECCCCC---HHHHHH
T ss_conf 9999991999898968999999-9999-6899489998999877557899988750893-89993055510---399996
Q ss_pred HCCCCCCCCCCCCCCHHHH--HHHHHHHHHHHHCCCC
Q ss_conf 3686547874201301243--3599999998856892
Q gi|254780234|r 80 RANALYEGYYLLGTAIARP--LIAKYLVDIANETGAD 114 (404)
Q Consensus 80 ~ana~Yeg~Ypl~tslaRp--lia~~lv~~a~~~ga~ 114 (404)
+... ...+.+++.++ ...+.+++.+.+.|..
T Consensus 80 ~g~~----~~~vi~~~~~~~~~~~~~li~A~~~ag~~ 112 (346)
T 3i6i_A 80 KEHE----IDIVVSTVGGESILDQIALVKAMKAVGTI 112 (346)
T ss_dssp HHTT----CCEEEECCCGGGGGGHHHHHHHHHHHCCC
T ss_pred HCCC----CCEEEECCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 2155----32378337863056667789999974965
No 89
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding protein, alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=49.08 E-value=12 Score=16.24 Aligned_cols=68 Identities=12% Similarity=0.087 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHCCC----CE-EECHHHCCCCHHHHHHHHHHHH--CCCCEEEEEEC-CCCCC-CHHHHHHHHHHHC
Q ss_conf 359999999885689----28-7500111682156799999985--87970774410-06876-3799999999708
Q gi|254780234|r 99 LIAKYLVDIANETGA----DA-IAHGSTGKGNDQVRFELSAYSL--NSDIEIIAPWR-HWSFK-GRQDLIDFAEKHA 166 (404)
Q Consensus 99 lia~~lv~~a~~~ga----~~-iaHG~TgkGNDQvRFe~~~~~l--~P~l~viaP~R-d~~~~-sRe~~i~ya~~~g 166 (404)
..++.+++.+...+. .. +-.|..+..+.+-|.+....+| +|++++..... +|+.. +++...++++++.
T Consensus 128 ~~a~~l~~~~~~~~~g~~~~i~~i~G~~~~~~~~~R~~G~~~al~~~~~~~i~~~~~~~~~~~~a~~~~~~lL~~~p 204 (350)
T 3h75_A 128 RMLKELLHKLGPVPAGHGIELLAFSGLKVTPAAQLRERGLRRALAEHPQVHLRQLVYGEWNRERAYRQAQQLLKRYP 204 (350)
T ss_dssp HHHHHHHHHHCCCCSSCCEEEEEEESCTTSHHHHHHHHHHHHHHHHCTTEEEEEEEECTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999998646444688647999958867727889888999999977997402555432568999999999983599
No 90
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, lyase; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=48.75 E-value=12 Score=16.21 Aligned_cols=64 Identities=19% Similarity=0.163 Sum_probs=32.8
Q ss_pred CCCCEE-EEEECCCHHHHHHHHHHHHHCCCEEEEEEEE-----CCCCCHHHHHHHHHHHCCCEEEEEECHHHH
Q ss_conf 777789-9991477259999999987189869999945-----787110689999999739807998200899
Q gi|254780234|r 3 RDVKKV-VLAYSGGLDTSIILKWLQVEKGLEVIVFIAD-----LGQGEELKIASDKARLLGAKEVYVKDLRRE 69 (404)
Q Consensus 3 ~~~kkV-vlaySGGLDTSv~i~~L~~e~g~eVi~~~~d-----~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~e 69 (404)
+.+|+| |..-+|-+- |.++..|. +.||+|+++.-. .+--+++..........+. +++..|+++.
T Consensus 26 ~~kK~~LVTGatGfIG-s~L~~~Ll-~~gy~V~g~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~ 95 (381)
T 1n7h_A 26 EPRKIALITGITGQDG-SYLTEFLL-GKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALM-KLHYADLTDA 95 (381)
T ss_dssp --CCEEEEETTTSHHH-HHHHHHHH-HTTCEEEEEECCCSSCCCTTTTTTC--------CCE-EEEECCTTCH
T ss_pred CCCCEEEEECCCCHHH-HHHHHHHH-HCCCEEEEEECCCCCCCHHHHHHHHHCHHHCCCCCE-EEEECCCCCH
T ss_conf 9999899925662899-99999999-785989999788865551326664324334156754-8998406898
No 91
>3ksm_A ABC-type sugar transport system, periplasmic component; PSI- II, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis kctc 2396}
Probab=47.21 E-value=13 Score=16.05 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHCCCCEEECHHHCCCCH---HHH-HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 599999998856892875001116821---567-99999985879707744100687637999999997089675
Q gi|254780234|r 100 IAKYLVDIANETGADAIAHGSTGKGND---QVR-FELSAYSLNSDIEIIAPWRHWSFKGRQDLIDFAEKHAIPID 170 (404)
Q Consensus 100 ia~~lv~~a~~~ga~~iaHG~TgkGND---QvR-Fe~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~ 170 (404)
+.+.+-+.|++.|.+.+-.++. ..+| |.+ ++..+..-.++.-+++|+.... -.+.++.+++.||||-
T Consensus 18 ~~~g~~~~a~~~g~~~~~~~~~-~~~d~~~q~~~i~~~l~~~~~Dgiii~~~~~~~---~~~~i~~~~~~~Ipvv 88 (276)
T 3ksm_A 18 VYLGAQKAADEAGVTLLHRSTK-DDGDIAGQIQILSYHLSQAPPDALILAPNSAED---LTPSVAQYRARNIPVL 88 (276)
T ss_dssp HHHHHHHHHHHHTCEEEECCCS-STTCHHHHHHHHHHHHHHSCCSEEEECCSSTTT---THHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHCCCEEEEEECC-CCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHH---HHHHHHHHHHCCCCEE
T ss_conf 9999999999829999999589-986899999999999982799899992798577---7999999997799499
No 92
>1q8f_A Pyrimidine nucleoside hydrolase; open alpha-beta structure, NH-fold; 1.70A {Escherichia coli} SCOP: c.70.1.1 PDB: 3b9x_A*
Probab=46.22 E-value=13 Score=15.94 Aligned_cols=40 Identities=18% Similarity=0.354 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC
Q ss_conf 987777899991477259999999987189869999945787
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ 42 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq 42 (404)
|+| +||++=-=+|.|-.++|.++......+|.++|+--|-
T Consensus 1 M~k--~kvIiDtD~G~DD~~AL~lal~~p~~~l~gIt~v~GN 40 (313)
T 1q8f_A 1 MEK--RKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGN 40 (313)
T ss_dssp --C--EEEEEEECCCHHHHHHHHHHHHCTTEEEEEEEECSSS
T ss_pred CCC--CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCC
T ss_conf 998--7899989998799999999977899889999995597
No 93
>3dzb_A Prephenate dehydrogenase; domain SWAP, PSI2, NYSGXRC, tyrosine biosynthesis, EC:1.3.12.-, structural genomics; 2.46A {Streptococcus thermophilus lmg 18311}
Probab=46.12 E-value=13 Score=15.93 Aligned_cols=61 Identities=18% Similarity=0.178 Sum_probs=41.0
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHH
Q ss_conf 98777789999147725999999998718986999994578711068999999973980799820089
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRR 68 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ 68 (404)
|+.++|||.+.=.|-.-+|++..+.+...+++|+++ |.- ....+.|.+.|+.....-+..+
T Consensus 1 m~m~~k~I~IIG~GlmG~Sia~al~~~~~~~~V~~~--D~~-----~~~~~~a~~~g~id~~~~~~~~ 61 (317)
T 3dzb_A 1 MSLSKKTIYIAGLGLIGGSLALGIKRDHPDYEILGY--NRS-----DYSRNIALERGIVDRATGDFKE 61 (317)
T ss_dssp -----CEEEESCCSHHHHHHHHHHHTTCTTSEEEEE--CSC-----HHHHHHHHHTCSCSEEESCHHH
T ss_pred CCCCCCEEEEEEECHHHHHHHHHHHHCCCCCEEEEE--ECC-----HHHHHHHHHCCCCCCCCCCHHH
T ss_conf 997888799992188999999999960999889999--699-----9999999986997400388988
No 94
>1vkr_A Mannitol-specific PTS system enzyme iiabc components; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli O157} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=46.03 E-value=11 Score=16.55 Aligned_cols=40 Identities=20% Similarity=0.319 Sum_probs=27.5
Q ss_pred CCCCEEEEEECCCHHHHHHHHHHH----HHCCCEE-EEEEEECCC
Q ss_conf 777789999147725999999998----7189869-999945787
Q gi|254780234|r 3 RDVKKVVLAYSGGLDTSIILKWLQ----VEKGLEV-IVFIADLGQ 42 (404)
Q Consensus 3 ~~~kkVvlaySGGLDTSv~i~~L~----~e~g~eV-i~~~~d~Gq 42 (404)
.+++||++++..|+-||.++.-.- .+.|.+. ..-+.++++
T Consensus 11 ~~vkkIlvVC~~G~GSS~ml~~~i~~~l~~~~i~~~~v~~~~~~~ 55 (125)
T 1vkr_A 11 SHVRKIIVACDAGMGSSAMGAGVLRKKIQDAGLSQISVTNSAINN 55 (125)
T ss_dssp CCCCEEEECCSSSSHHHHHHHHHHHHHHHHTTCTTSEEEECCTTC
T ss_pred HHHCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEHHC
T ss_conf 652789999999965799999999999998499832788732520
No 95
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=45.61 E-value=8.8 Score=17.20 Aligned_cols=105 Identities=13% Similarity=0.101 Sum_probs=65.1
Q ss_pred EEEECC--CHHHHHHHHHHHHHCCCEEEEEEEECC-CC-------CHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHH
Q ss_conf 999147--725999999998718986999994578-71-------10689999999739807998200899999879999
Q gi|254780234|r 9 VLAYSG--GLDTSIILKWLQVEKGLEVIVFIADLG-QG-------EELKIASDKARLLGAKEVYVKDLRREFVRDFVFPM 78 (404)
Q Consensus 9 vlaySG--GLDTSv~i~~L~~e~g~eVi~~~~d~G-q~-------~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~ 78 (404)
|+.-|- +--+-..+.+|+ +.||.+..+..+.. +. ..+.++. +..+..++=...+.+.+.+..+
T Consensus 18 VVGaS~~~~k~g~~v~~~L~-~~g~~~~~v~p~~~~~~i~g~~~~~sl~dip------~~vDlv~i~vp~~~v~~~v~e~ 90 (140)
T 1iuk_A 18 VLGAHKDPSRPAHYVPRYLR-EQGYRVLPVNPRFQGEELFGEEAVASLLDLK------EPVDILDVFRPPSALMDHLPEV 90 (140)
T ss_dssp EETCCSSTTSHHHHHHHHHH-HTTCEEEEECGGGTTSEETTEECBSSGGGCC------SCCSEEEECSCHHHHTTTHHHH
T ss_pred EEEECCCCCCCHHHHHHHHH-HCCCCEEEECCCCCCCEECCEEECCCHHHCC------CCCCEEEEEECHHHHHHHHHHH
T ss_conf 98106999983999999999-7899338878777653556827206567648------9873899980889999999999
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHH
Q ss_conf 736865478742013012433599999998856892875001116821567
Q gi|254780234|r 79 FRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVR 129 (404)
Q Consensus 79 I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvR 129 (404)
+..++. .-|+.... .-+.+++.|++.|..+|...|.+- ...|
T Consensus 91 ~~~g~~---~v~~q~G~----~~~e~~~~a~~~Gi~vI~~~C~~v--e~~~ 132 (140)
T 1iuk_A 91 LALRPG---LVWLQSGI----RHPEFEKALKEAGIPVVADRCLMV--EHKR 132 (140)
T ss_dssp HHHCCS---CEEECTTC----CCHHHHHHHHHTTCCEEESCCHHH--HHHH
T ss_pred HHCCCC---EEEECCCC----CCHHHHHHHHHCCCEEECCCCCHH--HHHH
T ss_conf 962989---89989896----899999999995997992894276--9999
No 96
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=45.56 E-value=13 Score=15.87 Aligned_cols=48 Identities=23% Similarity=0.301 Sum_probs=21.6
Q ss_pred ECHHHCCCCHHHHHHHHHHHHC--CCCEEEEEECCCCC---CCHHHHHHHHHHH
Q ss_conf 5001116821567999999858--79707744100687---6379999999970
Q gi|254780234|r 117 AHGSTGKGNDQVRFELSAYSLN--SDIEIIAPWRHWSF---KGRQDLIDFAEKH 165 (404)
Q Consensus 117 aHG~TgkGNDQvRFe~~~~~l~--P~l~viaP~Rd~~~---~sRe~~i~ya~~~ 165 (404)
.-|..+..+.+.|.+....++. |+.++.. +....+ .+++....+++.+
T Consensus 134 ~~g~~~~~~~~~R~~g~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~ 186 (306)
T 2vk2_A 134 LQGTVGASVAIDRKKGFAEAIKNAPNIKIIR-SQSGDFTRSKGKEVMESFIKAE 186 (306)
T ss_dssp EECSTTCHHHHHHHHHHHHHTTTCTTEEEEE-EEECTTCHHHHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHCCCCCCEE-EEECCCCHHHHHHHHHHHHHHH
T ss_conf 3277776089999999999998669985014-5522100478999999999873
No 97
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=45.30 E-value=14 Score=15.85 Aligned_cols=21 Identities=24% Similarity=0.444 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHCCCCEEECH
Q ss_conf 359999999885689287500
Q gi|254780234|r 99 LIAKYLVDIANETGADAIAHG 119 (404)
Q Consensus 99 lia~~lv~~a~~~ga~~iaHG 119 (404)
+=...++++|++.||++|..|
T Consensus 61 l~~~~i~~~a~~~~~dai~pg 81 (681)
T 3n6r_A 61 IVIDKVMAAIRATGAQAVHPG 81 (681)
T ss_dssp SCHHHHHHHHHHTCCSCCBCC
T ss_pred CCHHHHHHHHHHCCCCEEECC
T ss_conf 389999999998099999368
No 98
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=44.94 E-value=14 Score=15.81 Aligned_cols=38 Identities=21% Similarity=0.221 Sum_probs=23.9
Q ss_pred CCCCCCEEEEEECC--CHHH--HHHHHHHHHHCCCEEEEEEEE
Q ss_conf 98777789999147--7259--999999987189869999945
Q gi|254780234|r 1 MSRDVKKVVLAYSG--GLDT--SIILKWLQVEKGLEVIVFIAD 39 (404)
Q Consensus 1 M~~~~kkVvlaySG--GLDT--Sv~i~~L~~e~g~eVi~~~~d 39 (404)
||+..|||+++-+| |-=+ -.+...|+ ++|+||.-++..
T Consensus 2 ~~~~~kkili~t~GtGGHi~~a~ala~~L~-~~g~eV~~i~~~ 43 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLM-AQGWQVRWLGTA 43 (364)
T ss_dssp -----CEEEEECCSSHHHHHHHHHHHHHHH-TTTCEEEEEECT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHHHH-HCCCEEEEEEEC
T ss_conf 999997699986897999999999999999-688989999838
No 99
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=44.59 E-value=14 Score=15.77 Aligned_cols=103 Identities=14% Similarity=0.022 Sum_probs=49.3
Q ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCC
Q ss_conf 77778999914772599999999871898699999457871106899999997398079982008999998799997368
Q gi|254780234|r 3 RDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRAN 82 (404)
Q Consensus 3 ~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~an 82 (404)
+-|++-||-.=-|.=-|.++..|. ++|++|++++=+. +..+.+ ...|+ +..+.|..+.-.. ..
T Consensus 2 ~~M~~~vlItGaGfIGs~lv~~Ll-~~G~~V~~l~R~~---~~~~~l----~~~~~-~~~~~d~~~~~~~--------~~ 64 (286)
T 3ius_A 2 NAMTGTLLSFGHGYTARVLSRALA-PQGWRIIGTSRNP---DQMEAI----RASGA-EPLLWPGEEPSLD--------GV 64 (286)
T ss_dssp ---CCEEEEETCCHHHHHHHHHHG-GGTCEEEEEESCG---GGHHHH----HHTTE-EEEESSSSCCCCT--------TC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEECCH---HHHHHH----HHCCC-EEEECCCCCHHHH--------HH
T ss_conf 988983899896199999999999-7899899994883---655788----75696-7996462001331--------01
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHC
Q ss_conf 6547874201301243359999999885689287500111
Q gi|254780234|r 83 ALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTG 122 (404)
Q Consensus 83 a~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~Tg 122 (404)
.......+-.....-..-.......+...+...+.+.+|.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ss~ 104 (286)
T 3ius_A 65 THLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTT 104 (286)
T ss_dssp CEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 0001013432134317778999999974787389995551
No 100
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=44.32 E-value=14 Score=15.74 Aligned_cols=158 Identities=16% Similarity=0.044 Sum_probs=72.9
Q ss_pred CCEEEEEECCCHHHHH------HHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHH
Q ss_conf 7789999147725999------9999987189869999945787110689999999739807998200899999879999
Q gi|254780234|r 5 VKKVVLAYSGGLDTSI------ILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPM 78 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv------~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~ 78 (404)
..||.+.+...=|.=+ +-... ++.||+++.+ +.+..++....-+.+...|+.-.++.........+.+..+
T Consensus 2 ~~kIg~i~~~~~~p~~~~~~~g~~~~a-~~~g~~~i~~--~~~d~~~~~~~i~~~i~~~vdgiIi~~~~~~~~~~~~~~a 78 (306)
T 8abp_A 2 NLKLGFLVKQPEEPWFQTEWKFADKAG-KDLGFEVIKI--AVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKA 78 (306)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHHH-HHHTEEEEEE--ECCSHHHHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHHH
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHH-HHCCCEEEEE--CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 749999969998889999999999999-9739999997--5999999999999999769998999468842249999999
Q ss_pred HHCCC-------CCC--------CCCCCCCC--HHHHHHHHHHHHHHHHCCCC---EEECHHHCC--CCHHHHHHHHHHH
Q ss_conf 73686-------547--------87420130--12433599999998856892---875001116--8215679999998
Q gi|254780234|r 79 FRANA-------LYE--------GYYLLGTA--IARPLIAKYLVDIANETGAD---AIAHGSTGK--GNDQVRFELSAYS 136 (404)
Q Consensus 79 I~ana-------~Ye--------g~Ypl~ts--laRplia~~lv~~a~~~ga~---~iaHG~Tgk--GNDQvRFe~~~~~ 136 (404)
..++. ... .....++. -+=-..++.+++...+.|.. .++...++. .+.+.|++....+
T Consensus 79 ~~~giPvV~~d~~~~~~~~~~~~~~~~v~~d~~~~G~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~R~~g~~~~ 158 (306)
T 8abp_A 79 RGYDMKVIAVDDQFVNAKGKPMDTVPLVMLAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMDA 158 (306)
T ss_dssp HHTTCEEEEESSCCBCTTSCBCTTSCEEEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEECTTSHHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEECCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 97599789997123445667667653661457999999999999971744665653699991797660799999999999
Q ss_pred H----CCCCEEE-EEECCCCCC-CHHHHHHHHHHH
Q ss_conf 5----8797077-441006876-379999999970
Q gi|254780234|r 137 L----NSDIEII-APWRHWSFK-GRQDLIDFAEKH 165 (404)
Q Consensus 137 l----~P~l~vi-aP~Rd~~~~-sRe~~i~ya~~~ 165 (404)
+ .|..+++ .+.-+|+.. .++....++.+|
T Consensus 159 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (306)
T 8abp_A 159 LKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQH 193 (306)
T ss_dssp HHHHTCCGGGEEEEECSSSSHHHHHHHHHHHHTTC
T ss_pred HHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 99709986320012244514679999999988648
No 101
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, cytoplasm, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=44.20 E-value=9.4 Score=16.96 Aligned_cols=17 Identities=6% Similarity=0.280 Sum_probs=7.0
Q ss_pred CCEEEEEEEECCCCCCC
Q ss_conf 61599987727831088
Q gi|254780234|r 350 KGNVMVVGRESNKSLYS 366 (404)
Q Consensus 350 kG~~~v~gr~S~~sLy~ 366 (404)
.|.++++..--|...|.
T Consensus 269 ~G~i~v~diGiP~~v~~ 285 (306)
T 3d3j_A 269 AGRIYLCDIGIPQQVFQ 285 (306)
T ss_dssp GCEEEEECCCCCHHHHH
T ss_pred CCEEEEECCCCCHHHHH
T ss_conf 68599976889989999
No 102
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomerase; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=44.19 E-value=14 Score=15.73 Aligned_cols=111 Identities=16% Similarity=0.208 Sum_probs=58.3
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHH-HHHHHHHHHHHCCC
Q ss_conf 77899991477259999999987189869999945787110689999999739807998200899-99987999973686
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRRE-FVRDFVFPMFRANA 83 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~e-f~~~~i~~~I~ana 83 (404)
||||++-=..|.--|.++.+|. +.|++|+++. ++......+.++. ....+-.+++..|+++. .... ++...+...
T Consensus 1 M~KILVTGgtGfIG~~lv~~Ll-~~g~~V~~~d-~~~~~~~~~~~~~-~~~~~~~~~i~~Di~d~~~l~~-~~~~~~~D~ 76 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFAL-SQGIDLIVFD-NLSRKGATDNLHW-LSSLGNFEFVHGDIRNKNDVTR-LITKYMPDS 76 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEE-CCCSTTHHHHHHH-HHTTCCCEEEECCTTCHHHHHH-HHHHHCCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEE-CCCCCCCHHHHHH-HHCCCCCEEEECCCCCHHHHHH-HHHHCCCCE
T ss_conf 9889992887489999999999-7839899997-9886651667887-5027981899761689899999-874326747
Q ss_pred CCC-CCCCCCC-CHHHHHH--------HHHHHHHHHHCCCCEEECH
Q ss_conf 547-8742013-0124335--------9999999885689287500
Q gi|254780234|r 84 LYE-GYYLLGT-AIARPLI--------AKYLVDIANETGADAIAHG 119 (404)
Q Consensus 84 ~Ye-g~Ypl~t-slaRpli--------a~~lv~~a~~~ga~~iaHG 119 (404)
.+. ......+ ....|.. .+.+++.+++.++.....-
T Consensus 77 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~~~ 122 (347)
T 1orr_A 77 CFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 122 (347)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9982332331222348788775499999999998764135566566
No 103
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=43.50 E-value=13 Score=16.03 Aligned_cols=68 Identities=21% Similarity=0.221 Sum_probs=36.3
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHH
Q ss_conf 987777899991477259999999987189869999945787110689999999739807998200899
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRRE 69 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~e 69 (404)
|+.+.|+|++-=.-|.=-|-++.+|. +.|++|+++.-+....+......+......-.+.+-.|+.+.
T Consensus 1 m~~~~k~VlITGatGfiG~~l~~~Ll-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~ 68 (337)
T 2c29_D 1 MGSQSETVCVTGASGFIGSWLVMRLL-ERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADE 68 (337)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTST
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCH
T ss_conf 99999889998898699999999999-783989999788652788998874015667659996505562
No 104
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=43.30 E-value=14 Score=15.64 Aligned_cols=60 Identities=18% Similarity=0.191 Sum_probs=33.7
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHH--CCCE-EEEEECHHHH
Q ss_conf 78999914772599999999871898699999457871106899999997--3980-7998200899
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARL--LGAK-EVYVKDLRRE 69 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~--~Ga~-~~~v~D~r~e 69 (404)
|+|++-=..|.=-|.++..|. +.|++|+++.-+... .+.+...... .+.. ..+..|+++.
T Consensus 12 k~VLVTG~tGfIGs~l~~~Ll-~~G~~V~~~vr~~~~---~~~l~~~~~~~~~~~~~~~~~~Dl~~~ 74 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLL-EHGYKVRGTARSASK---LANLQKRWDAKYPGRFETAVVEDMLKQ 74 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSHHH---HHHHHHHHHHHSTTTEEEEECSCTTST
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCHH---HHHHHHHHHCCCCCCCCEEEECCCCCH
T ss_conf 999998997899999999999-785989999678206---899987441115554547886756898
No 105
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=42.90 E-value=15 Score=15.60 Aligned_cols=47 Identities=17% Similarity=0.087 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf 599999999871898699999457871106899999997398079982008
Q gi|254780234|r 17 DTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLR 67 (404)
Q Consensus 17 DTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r 67 (404)
.--....-|.+..|.+|.++++- . +.+.+.+++..+|+.+.|++|-.
T Consensus 23 Ellt~A~~La~~~g~~v~av~~G--~--~~~~~a~~l~~~Ga~~V~~~~~~ 69 (217)
T 3ih5_A 23 ELLTKGRSLANELNCQLEAVVAG--T--GLKEIEKQILPYGVDKLHVFDAE 69 (217)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEE--S--CCTTTHHHHGGGTCSEEEEEECG
T ss_pred HHHHHHHHHHHHCCCEEEEEEEC--C--CHHHHHHHHHHCCCCEEEEEECC
T ss_conf 99999999998639909999967--9--73888887752387338998243
No 106
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=41.90 E-value=15 Score=15.49 Aligned_cols=98 Identities=13% Similarity=0.171 Sum_probs=63.4
Q ss_pred HHHHHHHCCC--EEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf 9999871898--69999945787110689999999739807998200899999879999736865478742013012433
Q gi|254780234|r 22 LKWLQVEKGL--EVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANALYEGYYLLGTAIARPL 99 (404)
Q Consensus 22 i~~L~~e~g~--eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~Yeg~Ypl~tslaRpl 99 (404)
...||+.+|. +|+++++ | +...+..-++|+..||.+.+.+.- +.|. |.-++ .
T Consensus 46 Al~lkE~~g~~~~Vt~ls~--G-p~~a~~~Lr~alAmGaD~av~v~d-~~~~---------------~~d~~-------a 99 (264)
T 1o97_C 46 AMKIKESSDTDVEVVVVSV--G-PDRVDESLRKCLAKGADRAVRVWD-DAAE---------------GSDAI-------V 99 (264)
T ss_dssp HHHHHHHCSSCCEEEEEEE--S-CGGGHHHHHHHHHTTCSEEEEECC-GGGT---------------TCCHH-------H
T ss_pred HHHHHHCCCCCEEEEEEEE--C-CHHHHHHHHHHHHHCCCEEEEEEC-CCCC---------------CCCHH-------H
T ss_conf 9999844799569999981--5-088899999999727972699960-5777---------------87899-------9
Q ss_pred HHHHHHHHHHHCCCCEEECHH--HCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf 599999998856892875001--1168215679999998587970774
Q gi|254780234|r 100 IAKYLVDIANETGADAIAHGS--TGKGNDQVRFELSAYSLNSDIEIIA 145 (404)
Q Consensus 100 ia~~lv~~a~~~ga~~iaHG~--TgkGNDQvRFe~~~~~l~P~l~via 145 (404)
+|+.+..+.++.+.|.|--|. +--.+-|+=..++-..=-|.+....
T Consensus 100 tA~~LA~~i~~~~~DLIl~G~qs~D~~tgqvg~~lAe~Lg~p~vt~v~ 147 (264)
T 1o97_C 100 VGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEE
T ss_conf 999999999743999999914346999883428999981998156788
No 107
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.50A {Geobacter metallireducens gs-15}
Probab=41.68 E-value=12 Score=16.21 Aligned_cols=31 Identities=26% Similarity=0.312 Sum_probs=21.9
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 987777899991477259999999987189869999
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVF 36 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~ 36 (404)
|+. ||.+.=.|.+-+.++ ..|. +.|++|+.+
T Consensus 1 m~M---kI~ViGaGaiG~~~a-~~L~-~aG~~Vtlv 31 (312)
T 3hn2_A 1 MSL---RIAIVGAGALGLYYG-ALLQ-RSGEDVHFL 31 (312)
T ss_dssp ------CEEEECCSTTHHHHH-HHHH-HTSCCEEEE
T ss_pred CCC---EEEEECCCHHHHHHH-HHHH-HCCCCEEEE
T ss_conf 988---899999289999999-9998-369956999
No 108
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=40.61 E-value=16 Score=15.36 Aligned_cols=115 Identities=20% Similarity=0.190 Sum_probs=59.8
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHH---HHCCCEEEEEEE-ECCC----------------CCHHHHHHHHHHHCCCEE
Q ss_conf 98777789999147725999999998---718986999994-5787----------------110689999999739807
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQ---VEKGLEVIVFIA-DLGQ----------------GEELKIASDKARLLGAKE 60 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~---~e~g~eVi~~~~-d~Gq----------------~~d~~~~~~~A~~~Ga~~ 60 (404)
|+.=-|||++|+.|.=.+--++.|-. ...+.+++.+++ +.-. ....+...+.....
T Consensus 1 ~~~m~k~ILv~vD~S~~s~~al~~a~~~A~~~~a~l~llhv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 76 (162)
T 1mjh_A 1 MSVMYKKILYPTDFSETAEIALKHVKAFKTLKAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNK---- 76 (162)
T ss_dssp --CCCCEEEEECCSCHHHHHHHHHHHHTCCSSCCEEEEEEEEEGGGTC-----------------CHHHHHHHHHH----
T ss_pred CCHHCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----
T ss_conf 9622295899988998999999999999874499699999842565554433222245332220177889999999----
Q ss_pred EEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHH
Q ss_conf 9982008999998799997368654787420130124335999999988568928750011168215
Q gi|254780234|r 61 VYVKDLRREFVRDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQ 127 (404)
Q Consensus 61 ~~v~D~r~ef~~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQ 127 (404)
..+-.+++.+++.-.+-..+.-++. ...-+. .++.+++.|++.++|.|.=|+.|.++-.
T Consensus 77 --~~~~a~~~l~~~~~~~~~~~v~~~~----~~~~G~--~~~~I~~~a~~~~~DlIVvG~~~~~~~~ 135 (162)
T 1mjh_A 77 --LTEEAKNKMENIKKELEDVGFKVKD----IIVVGI--PHEEIVKIAEDEGVDIIIMGSHGKTNLK 135 (162)
T ss_dssp --HHHHHHHHHHHHHHHHHHTTCEEEE----EEEEEC--HHHHHHHHHHHTTCSEEEEESCCSSCCT
T ss_pred --HHHHHHHHHHHHHHHHHHCCCEEEE----EEEECC--HHHHHHHHHCCCCCCEEEECCCCCCCCC
T ss_conf --9999999999999988765976999----999367--8999998733565898998478998655
No 109
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=40.24 E-value=16 Score=15.32 Aligned_cols=28 Identities=29% Similarity=0.363 Sum_probs=10.9
Q ss_pred EEEEEECCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 89999147725999999998718986999
Q gi|254780234|r 7 KVVLAYSGGLDTSIILKWLQVEKGLEVIV 35 (404)
Q Consensus 7 kVvlaySGGLDTSv~i~~L~~e~g~eVi~ 35 (404)
||.+.=.--.--.++...| +..|++|.+
T Consensus 9 rILvVDD~~~~~~~l~~~L-~~~g~~v~~ 36 (136)
T 1dcf_A 9 KVLVMDENGVSRMVTKGLL-VHLGCEVTT 36 (136)
T ss_dssp EEEEECSCHHHHHHHHHHH-HHTTCEEEE
T ss_pred EEEEEECCHHHHHHHHHHH-HHCCCEEEE
T ss_conf 9999939899999999999-987999999
No 110
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=39.23 E-value=17 Score=15.21 Aligned_cols=13 Identities=8% Similarity=-0.072 Sum_probs=7.7
Q ss_pred HHHHHHHHHCCCC
Q ss_conf 9999999708967
Q gi|254780234|r 157 DLIDFAEKHAIPI 169 (404)
Q Consensus 157 ~~i~ya~~~gIpv 169 (404)
....++++.|+.+
T Consensus 68 ~aa~~L~~~G~~~ 80 (94)
T 1wv9_A 68 VAALYLEAEGYEA 80 (94)
T ss_dssp HHHHHHHHHTCCE
T ss_pred HHHHHHHHCCCCE
T ss_conf 9999999869939
No 111
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=39.06 E-value=17 Score=15.19 Aligned_cols=116 Identities=11% Similarity=0.056 Sum_probs=69.4
Q ss_pred EEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHH---------------
Q ss_conf 89999147725999999998718986999994578711068999999973980799820089999---------------
Q gi|254780234|r 7 KVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFV--------------- 71 (404)
Q Consensus 7 kVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~--------------- 71 (404)
||.+.=.|..-+..+.+++....+.+|++++ |. +.+.+++-+.+.|......-|..+-+.
T Consensus 4 rv~iiG~G~~g~~h~~~~~~~~~~~~l~~v~-d~----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 78 (344)
T 3mz0_A 4 RIGVIGTGAIGKEHINRITNKLSGAEIVAVT-DV----NQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPA 78 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCSSEEEEEEE-CS----SHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCEEEEEE-CC----CHHHHHHHHHHHCCCCCEECCHHHHHCCCCCCEEEECCCCCC
T ss_conf 4999998299999999998428996899998-99----999999999985899806799999955999888996265211
Q ss_pred -HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHH
Q ss_conf -98799997368654787420130124335999999988568928750011168215679
Q gi|254780234|r 72 -RDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRF 130 (404)
Q Consensus 72 -~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRF 130 (404)
.+++..+++++--.-=.-|+++++ --++.+++.|++.+...+.-|...+-+..++.
T Consensus 79 H~~~~~~al~~gkhv~~EKP~a~~~---~e~~~l~~~a~~~~~~~~~v~~~~R~~p~~~~ 135 (344)
T 3mz0_A 79 HESSVLKAIKAQKYVFCEKPLATTA---EGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQ 135 (344)
T ss_dssp HHHHHHHHHHTTCEEEECSCSCSSH---HHHHHHHHHHHHHSSCCEEECCGGGGSHHHHH
T ss_pred HHHHHHHHHHCCCCEEECCCCCCCC---HHHHHHHHHHHHHCCCEEEEEEEEEECHHHHH
T ss_conf 5999999985499726468742120---04789999987520430575421220137899
No 112
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=38.98 E-value=17 Score=15.18 Aligned_cols=39 Identities=21% Similarity=0.297 Sum_probs=26.3
Q ss_pred CCCCEEEEEECCCHHH---HHHHHHHHHHCCCEEEEEEEECC
Q ss_conf 7777899991477259---99999998718986999994578
Q gi|254780234|r 3 RDVKKVVLAYSGGLDT---SIILKWLQVEKGLEVIVFIADLG 41 (404)
Q Consensus 3 ~~~kkVvlaySGGLDT---Sv~i~~L~~e~g~eVi~~~~d~G 41 (404)
+.++||+|+.+|+.-. ...+.+|....|++|.++.-.-.
T Consensus 17 ~~k~~ILl~vtGsIAayk~~~lv~~L~~~~g~~V~vv~T~sA 58 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERA 58 (206)
T ss_dssp CSSEEEEEEECSSGGGGTHHHHHHHHC---CEEEEEEECTGG
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECHHH
T ss_conf 688669999704899998999999998656978999988689
No 113
>2ax3_A Hypothetical protein TM0922; putative carbohydrate kinase, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.27A {Thermotoga maritima MSB8} SCOP: c.72.1.4 c.104.1.1
Probab=38.65 E-value=11 Score=16.40 Aligned_cols=100 Identities=13% Similarity=0.233 Sum_probs=59.1
Q ss_pred CEEEEEEC-C--CHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCC
Q ss_conf 78999914-7--72599999999871898699999457871106899999997398079982008999998799997368
Q gi|254780234|r 6 KKVVLAYS-G--GLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRAN 82 (404)
Q Consensus 6 kkVvlayS-G--GLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~an 82 (404)
+||++... | |=|-=++..+|. +.|++|..+...---..+.....+.+.++|.. ..- ..... .+...
T Consensus 53 ~~v~vl~G~GNNGGDglv~Ar~L~-~~g~~V~v~~~~~~~~~~~~~~~~~~~~~g~~-~~~-~~~~~--------~~~~~ 121 (502)
T 2ax3_A 53 YRFLVLCGGGNNGGDGFVVARNLL-GVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGK-VVE-QFEPS--------ILNEF 121 (502)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHT-TTSSEEEEEECCSSCCHHHHHHHHHHHHTTCC-EES-CCCGG--------GGGGC
T ss_pred CEEEEEECCCCCHHHHHHHHHHHH-HCCCCEEEEEECCCCCHHHHHHHHHHHHCCCC-EEC-CCCCC--------CCCCC
T ss_conf 989999899978999999999998-68994799995899998999999999986996-663-56621--------15556
Q ss_pred CCCCCCCCCCCCHHHHHHH--HHHHHHHHHCCCCEEE
Q ss_conf 6547874201301243359--9999998856892875
Q gi|254780234|r 83 ALYEGYYLLGTAIARPLIA--KYLVDIANETGADAIA 117 (404)
Q Consensus 83 a~Yeg~Ypl~tslaRplia--~~lv~~a~~~ga~~ia 117 (404)
-+.-+ =.++|.+.||+-. ..+++..++.++..||
T Consensus 122 dliVD-al~GtG~~~~l~~~~~~~i~~iN~~~~~vva 157 (502)
T 2ax3_A 122 DVVVD-AIFGTGLRGEITGEYAEIINLVNKSGKVVVS 157 (502)
T ss_dssp SEEEE-ESCCTTCCSCCCHHHHHHHHHHHHSCCEEEE
T ss_pred CEEEE-CCEECCCCCCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 57985-2453155765447899999997630482798
No 114
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=38.57 E-value=8.4 Score=17.32 Aligned_cols=93 Identities=15% Similarity=0.131 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHCCCEEEEEEEECC------CC--CHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 5999999998718986999994578------71--106899999997398079982008999998799997368654787
Q gi|254780234|r 17 DTSIILKWLQVEKGLEVIVFIADLG------QG--EELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANALYEGY 88 (404)
Q Consensus 17 DTSv~i~~L~~e~g~eVi~~~~d~G------q~--~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~Yeg~ 88 (404)
-+..++.+|+ +.||+++.+..+-. ++ .+++++. +..++.++=...+++.+.+..++..+..-
T Consensus 28 ~g~~v~~~L~-~~g~~~~~v~p~~~~~~i~G~~~y~sl~~ip------~~vDlvvi~~p~~~v~~~~~~~~~~g~k~--- 97 (145)
T 2duw_A 28 PSYRVMKYLL-DQGYHVIPVSPKVAGKTLLGQQGYATLADVP------EKVDMVDVFRNSEAAWGVAQEAIAIGAKT--- 97 (145)
T ss_dssp HHHHHHHHHH-HHTCCEEEECSSSTTSEETTEECCSSTTTCS------SCCSEEECCSCSTHHHHHHHHHHHHTCCE---
T ss_pred CHHHHHHHHH-HCCCCEEEECCCCCCCCCCCEEEECCHHHCC------CCCEEEEEECCHHHHHHHHHHHHHCCCCE---
T ss_conf 3999999999-6799448878875443218815752464589------98649999637325899999999749987---
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCC
Q ss_conf 42013012433599999998856892875001116
Q gi|254780234|r 89 YLLGTAIARPLIAKYLVDIANETGADAIAHGSTGK 123 (404)
Q Consensus 89 Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~Tgk 123 (404)
-|+.... .-..++++|++.|..+|...|.|-
T Consensus 98 v~~q~g~----~~~~~~~~a~~~Gi~vigpnClgv 128 (145)
T 2duw_A 98 LWLQLGV----INEQAAVLAREAGLSVVMDRCPAI 128 (145)
T ss_dssp EECCTTC----CCHHHHHHHHTTTCEEECSCCHHH
T ss_pred EEECCCH----HHHHHHHHHHHCCCEEECCCCCEE
T ss_conf 8732516----649999999995998995997364
No 115
>3fz0_A Nucleoside hydrolase, putative; NH fold, open alpha/beta structure, glycosidase; HET: BTB; 2.50A {Trypanosoma brucei}
Probab=38.39 E-value=17 Score=15.12 Aligned_cols=40 Identities=23% Similarity=0.350 Sum_probs=34.0
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC
Q ss_conf 987777899991477259999999987189869999945787
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ 42 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq 42 (404)
|++ |||++=--.|.|-.++|.++......||.++|+--|.
T Consensus 4 m~~--kkvIiDtD~G~DDa~Al~~al~~~~~~l~gIt~v~GN 43 (360)
T 3fz0_A 4 MVH--RKLIIDTDCGGDDAIAIMLAMTQPDVEVIAITVVWGN 43 (360)
T ss_dssp -CE--EEEEEEECCCHHHHHHHHHHHTSTTEEEEEEEECCSS
T ss_pred CCC--CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf 777--6599989996689999999987899889999877798
No 116
>2fn9_A Ribose ABC transporter, periplasmic ribose- binding protein; RBP, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima MSB8} PDB: 2fn8_A*
Probab=37.61 E-value=18 Score=15.04 Aligned_cols=57 Identities=14% Similarity=0.179 Sum_probs=29.3
Q ss_pred CEEEEEECCCHHHHHHHHHHH------HHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEE
Q ss_conf 789999147725999999998------71898699999457871106899999997398079982
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQ------VEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVK 64 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~------~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~ 64 (404)
.||.|.... +++.+-....+ .+.||+++-+..+ ++.+.....-+.+...|..-.++.
T Consensus 3 g~Igvvvp~-~~~~f~~~~~~gi~~~a~~~g~~~~~~~~~-~~~~~~~~~i~~l~~~~vdgii~~ 65 (290)
T 2fn9_A 3 GKMAIVIST-LNNPWFVVLAETAKQRAEQLGYEATIFDSQ-NDTAKESAHFDAIIAAGYDAIIFN 65 (290)
T ss_dssp CEEEEEESC-SSSHHHHHHHHHHHHHHHHTTCEEEEEECT-TCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEEECC-CCCHHHHHHHHHHHHHHHHCCCEEEEEECC-CCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 989999288-989999999999999999869989999699-998999999999997499855301
No 117
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, PSI-2, protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=37.19 E-value=18 Score=14.99 Aligned_cols=104 Identities=18% Similarity=0.261 Sum_probs=54.1
Q ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHH-C
Q ss_conf 777789999147725999999998718986999994578711068999999973980799820089999987999973-6
Q gi|254780234|r 3 RDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFR-A 81 (404)
Q Consensus 3 ~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~-a 81 (404)
+.||=.|+.=||++-+.++-.++ +.|++|++++=+. +.. .+ ....++.+....|..+.+.+ +++ +
T Consensus 20 ~~MkIlI~GasG~iG~~lv~~Ll--~~g~~V~~l~R~~---~k~---~~-~~~~~~~~~~~~d~~~~~~~-----a~~~~ 85 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELK--NKGHEPVAMVRNE---EQG---PE-LRERGASDIVVANLEEDFSH-----AFASI 85 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH--HTTCEEEEEESSG---GGH---HH-HHHTTCSEEEECCTTSCCGG-----GGTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH--HCCCEEEEEECCH---HHH---HH-HHHCCCCCCCCCCHHHHHHH-----HCCCC
T ss_conf 99908999998889999999999--7859899998887---881---35-55235533113430333333-----12454
Q ss_pred CCCCCCC-CCCCCCHHHHHH-----HHHHHHHHHHCCCCEEECHH
Q ss_conf 8654787-420130124335-----99999998856892875001
Q gi|254780234|r 82 NALYEGY-YLLGTAIARPLI-----AKYLVDIANETGADAIAHGS 120 (404)
Q Consensus 82 na~Yeg~-Ypl~tslaRpli-----a~~lv~~a~~~ga~~iaHG~ 120 (404)
.+++--- .+-......+.. +..+++.|++.++.-+.+-+
T Consensus 86 d~vi~~~~~~~~~~~~~~~~~~~~~~~~li~aa~~~~v~~~v~~s 130 (236)
T 3e8x_A 86 DAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVS 130 (236)
T ss_dssp SEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEEE
T ss_conf 533311034677786521343123416788888755966899994
No 118
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genomics, protein structure initiative, PSI; HET: NAD; 1.95A {Listeria innocua}
Probab=36.93 E-value=18 Score=14.97 Aligned_cols=118 Identities=13% Similarity=0.109 Sum_probs=63.6
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCE--------------EEEEECH
Q ss_conf 98777789999147725999999998718986999994578711068999999973980--------------7998200
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAK--------------EVYVKDL 66 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~--------------~~~v~D~ 66 (404)
|+.++=||++.=.|+.-.. -++.++...+++|++++ |.-+. . .+.+...++. +.+++=.
T Consensus 1 m~mk~~rigiIG~G~~g~~-h~~~~~~~~~~~l~av~-d~~~~----~-~~~~~~~~~~~~~~~~ell~~~~iD~V~i~t 73 (359)
T 3e18_A 1 MSLKKYQLVIVGYGGMGSY-HVTLASAADNLEVHGVF-DILAE----K-REAAAQKGLKIYESYEAVLADEKVDAVLIAT 73 (359)
T ss_dssp --CCCEEEEEECCSHHHHH-HHHHHHTSTTEEEEEEE-CSSHH----H-HHHHHTTTCCBCSCHHHHHHCTTCCEEEECS
T ss_pred CCCCCCCEEEECCCHHHHH-HHHHHHHCCCCEEEEEE-CCCHH----H-HHHHHHCCCCCCCCHHHHHCCCCCCEEEECC
T ss_conf 9988771999946799999-99999858995899998-89999----9-9999862997019999995599989899878
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHH
Q ss_conf 899999879999736865478742013012433599999998856892875001116821567
Q gi|254780234|r 67 RREFVRDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVR 129 (404)
Q Consensus 67 r~ef~~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvR 129 (404)
...+-.+++..+++++----=.-|++.+++ -++.+++.+++.|..+.. |.+.+-+..++
T Consensus 74 p~~~h~~~~~~al~~gkhv~~EKP~a~~~~---e~~~l~~~~~~~~~~~~v-~~~~r~~p~~~ 132 (359)
T 3e18_A 74 PNDSHKELAISALEAGKHVVCEKPVTMTSE---DLLAIMDVAKRVNKHFMV-HQNRRWDEDFL 132 (359)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEESSCCSSHH---HHHHHHHHHHHHTCCEEE-ECGGGGCHHHH
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCHHH---HHHHHHHHHHHCCCCCCC-CCCCCCCCCCH
T ss_conf 805523567888853981999578642087---887889999752765422-22211475220
No 119
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=35.19 E-value=19 Score=14.78 Aligned_cols=60 Identities=20% Similarity=0.287 Sum_probs=38.2
Q ss_pred CCEE--EEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCE-EEEEECHHHH
Q ss_conf 7789--999147725999999998718986999994578711068999999973980-7998200899
Q gi|254780234|r 5 VKKV--VLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAK-EVYVKDLRRE 69 (404)
Q Consensus 5 ~kkV--vlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~-~~~v~D~r~e 69 (404)
|||| |..=|+|+--.++..++ +.|+.|+...-| .+.++...+.....|.. ..+..|+.++
T Consensus 1 MkKvalVTGas~GIG~aiA~~la--~~Ga~V~i~~r~---~~~~~~~~~~l~~~g~~~~~~~~Dvt~~ 63 (256)
T 1geg_A 1 MKKVALVTGAGQGIGKAIALRLV--KDGFAVAIADYN---DATAKAVASEINQAGGHAVAVKVDVSDR 63 (256)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH--HTTCEEEEEESC---HHHHHHHHHHHHHTTCCEEEEECCTTSH
T ss_pred CCCEEEECCCCCHHHHHHHHHHH--HCCCEEEEEECC---HHHHHHHHHHHHHCCCCEEEEEECCCCH
T ss_conf 99899991665589999999999--879989999798---9999999999996399299999428999
No 120
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=34.97 E-value=19 Score=14.75 Aligned_cols=57 Identities=21% Similarity=0.254 Sum_probs=37.3
Q ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCE-EEEEECHHHH
Q ss_conf 9999147725999999998718986999994578711068999999973980-7998200899
Q gi|254780234|r 8 VVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAK-EVYVKDLRRE 69 (404)
Q Consensus 8 VvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~-~~~v~D~r~e 69 (404)
+|..=|+|+--.++..+. ++|+.|+...-| .+.++...+...+.|.. ..+..|+.++
T Consensus 11 lITGas~GIG~aiA~~la--~~Ga~V~i~~r~---~~~l~~~~~~i~~~g~~~~~~~~Dvs~~ 68 (252)
T 3h7a_A 11 AVIGAGDYIGAEIAKKFA--AEGFTVFAGRRN---GEKLAPLVAEIEAAGGRIVARSLDARNE 68 (252)
T ss_dssp EEECCSSHHHHHHHHHHH--HTTCEEEEEESS---GGGGHHHHHHHHHTTCEEEEEECCTTCH
T ss_pred EEECCCHHHHHHHHHHHH--HCCCEEEEEECC---HHHHHHHHHHHHHCCCEEEEEECCCCCH
T ss_conf 997585589999999999--879999999899---9999999999996398399997776899
No 121
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=34.81 E-value=19 Score=14.74 Aligned_cols=100 Identities=16% Similarity=0.250 Sum_probs=58.8
Q ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99991477259999999987189869999945787110689999999739807998200899999879999736865478
Q gi|254780234|r 8 VVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANALYEG 87 (404)
Q Consensus 8 VvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~Yeg 87 (404)
+|+.=||-+-+.++-.+++...|++|++++=|......+ ...|+ +.+..|+.+. +.+..+++.- ..
T Consensus 3 lVtGaTG~iG~~vv~~L~~~~~g~~V~~~~R~~~~~~~l-------~~~~v-~~~~~D~~d~---~~l~~a~~g~---d~ 68 (286)
T 2zcu_A 3 AITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQAL-------AAQGI-TVRQADYGDE---AALTSALQGV---EK 68 (286)
T ss_dssp EEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHH-------HHTTC-EEEECCTTCH---HHHHHHTTTC---SE
T ss_pred EEECCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHH-------HHCCC-EEEEECCCCH---HHHHHHHHHC---CE
T ss_conf 999988579999999998449998799997896871344-------20897-8999618886---6699999637---66
Q ss_pred CCCCCC-CH-HHHHHHHHHHHHHHHCCCCEEECHHH
Q ss_conf 742013-01-24335999999988568928750011
Q gi|254780234|r 88 YYLLGT-AI-ARPLIAKYLVDIANETGADAIAHGST 121 (404)
Q Consensus 88 ~Ypl~t-sl-aRplia~~lv~~a~~~ga~~iaHG~T 121 (404)
-+.+.+ +. .+.-..+.+++.|++-|+.-+.+.|+
T Consensus 69 v~~~~~~~~~~~~~~~~~~i~aa~~~gv~~~v~~S~ 104 (286)
T 2zcu_A 69 LLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp EEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 999515443301678999999999669747865312
No 122
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=34.69 E-value=19 Score=14.72 Aligned_cols=121 Identities=12% Similarity=0.154 Sum_probs=59.5
Q ss_pred HHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 99999871898699999457871106899999997398079982008999998799997368654787420130124335
Q gi|254780234|r 21 ILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANALYEGYYLLGTAIARPLI 100 (404)
Q Consensus 21 ~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~Yeg~Ypl~tslaRpli 100 (404)
++.--+ +.+|-|-+|.+. .-+.+..+-+-|...++ +.++.=....+ .|. +-..+
T Consensus 9 ll~~A~-~~~yAV~AfNv~--~~e~~~avi~AAe~~~s-PvIlq~~~~~~--~~~--------------------~~~~~ 62 (286)
T 1gvf_A 9 LLQDAQ-ANGYAVPAFNIH--NAETIQAILEVCSEMRS-PVILAGTPGTF--KHI--------------------ALEEI 62 (286)
T ss_dssp HHHHHH-HHTCCEEEEECC--SHHHHHHHHHHHHHHTC-CCEEEECTTHH--HHS--------------------CHHHH
T ss_pred HHHHHH-HCCCEEEEEEEC--CHHHHHHHHHHHHHHCC-CEEEECCHHHH--HHC--------------------CHHHH
T ss_conf 999999-889379997779--99999999999999699-98998677788--567--------------------89999
Q ss_pred HHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEE------EECCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 999999988568928750011168215679999998587970774------4100687637999999997089675665
Q gi|254780234|r 101 AKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIA------PWRHWSFKGRQDLIDFAEKHAIPIDKNK 173 (404)
Q Consensus 101 a~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~via------P~Rd~~~~sRe~~i~ya~~~gIpv~~~~ 173 (404)
+..+...|++-+..+..|-=-| +| ||...+++.....=+- |+ +.++.--.+..+||..+|++|.+..
T Consensus 63 ~~~~~~~a~~~~VPV~lHlDH~--~~---~e~i~~ai~~GftSVMiD~S~l~~-eeNi~~Tk~vv~~ah~~gv~VEaEl 135 (286)
T 1gvf_A 63 YALCSAYSTTYNMPLALHLDHH--ES---LDDIRRKVHAGVRSAMIDGSHFPF-AENVKLVKSVVDFCHSQDCSVEAEL 135 (286)
T ss_dssp HHHHHHHHHHTTSCBEEEEEEE--CC---HHHHHHHHHTTCCEEEECCTTSCH-HHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCC--CC---HHHHHHHHHCCCCEEEEECCCCCH-HHHHHHHHHHHHHHHHHCCEEEEEE
T ss_conf 9999999873699889876536--88---789999861688648764898999-9999999999999986424267644
No 123
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=34.43 E-value=20 Score=14.69 Aligned_cols=64 Identities=8% Similarity=0.176 Sum_probs=39.9
Q ss_pred CCCCEEEEEE-CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHH--HHHHHHHCCCEEEEEECHHHH
Q ss_conf 7777899991-477259999999987189869999945787110689--999999739807998200899
Q gi|254780234|r 3 RDVKKVVLAY-SGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKI--ASDKARLLGAKEVYVKDLRRE 69 (404)
Q Consensus 3 ~~~kkVvlay-SGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~--~~~~A~~~Ga~~~~v~D~r~e 69 (404)
++|+||++-= +|.+-+.++ ..|. +.|++|.++.=+.....+.+. ..+.-...|+ +++..|+.+.
T Consensus 2 ~~M~KILItGatG~iG~~l~-~~L~-~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~~v-~~v~~D~~d~ 68 (321)
T 3c1o_A 2 SHMEKIIIYGGTGYIGKFMV-RASL-SFSHPTFIYARPLTPDSTPSSVQLREEFRSMGV-TIIEGEMEEH 68 (321)
T ss_dssp --CCCEEEETTTSTTHHHHH-HHHH-HTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTC-EEEECCTTCH
T ss_pred CCCCEEEEECCCCHHHHHHH-HHHH-HCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCE-EEEEEECCCH
T ss_conf 99888999899828999999-9999-789908999899866556778887876414981-9999645770
No 124
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=34.32 E-value=20 Score=14.68 Aligned_cols=72 Identities=14% Similarity=0.055 Sum_probs=35.2
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCC---CCCCCCCCCCCCHHHCCCCCCHHH
Q ss_conf 79707744100687637999999997089675665678864157243115457---632458457682010014658122
Q gi|254780234|r 139 SDIEIIAPWRHWSFKGRQDLIDFAEKHAIPIDKNKRGEAPFSIDTNLLHSSSE---GRVLEDPSQPAPEYVYKMIVSPEE 215 (404)
Q Consensus 139 P~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~E---gg~Ledp~~~~pe~~~~~t~~p~~ 215 (404)
...+|+- -|=+...|.-.-.+++++|+.|.... +..+-+--..-+ .-++-|-. =|--+-|..++..++
T Consensus 123 ~~~~VLv--VDD~~~~~~~i~~~L~~~g~~v~~a~------~g~eal~~l~~~~~~DlIllD~~-MP~~dG~e~~~~iR~ 193 (259)
T 3luf_A 123 QQIEVLV--VDDSRTSRHRTMAQLRKQLLQVHEAS------HAREALATLEQHPAIRLVLVDYY-MPEIDGISLVRMLRE 193 (259)
T ss_dssp TTCEEEE--ECSCHHHHHHHHHHHHTTTCEEEEES------SHHHHHHHHHHCTTEEEEEECSC-CSSSCHHHHHHHHHH
T ss_pred CCCEEEE--ECCCHHHHHHHHHHHHHCCCCEEECC------HHHHHHHHHHCCCCCEEEEECCC-CCCCCHHHHHHHHHH
T ss_conf 7625787--53888999999999983466245324------05689999844899659996477-767548999999983
Q ss_pred CCCC
Q ss_conf 7999
Q gi|254780234|r 216 APDT 219 (404)
Q Consensus 216 ap~~ 219 (404)
-|..
T Consensus 194 ~~~~ 197 (259)
T 3luf_A 194 RYSK 197 (259)
T ss_dssp HCCT
T ss_pred CCCC
T ss_conf 7889
No 125
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein structure initiative, structural genomics; 1.97A {Lactobacillus brevis atcc 367}
Probab=33.25 E-value=20 Score=14.56 Aligned_cols=156 Identities=12% Similarity=0.094 Sum_probs=67.6
Q ss_pred CCCCEEEEEECCCHHHHHH-------HHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHH
Q ss_conf 7777899991477259999-------999987189869999945787110689999999739807998200899999879
Q gi|254780234|r 3 RDVKKVVLAYSGGLDTSII-------LKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFV 75 (404)
Q Consensus 3 ~~~kkVvlaySGGLDTSv~-------i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i 75 (404)
++-+.|.|.+.. ++..+. -.-+ .+.||.++-+.++ +..+.....-+.....+..-+++.+... ++.+
T Consensus 5 ~~S~~Igvivp~-~~~~f~~~~i~gi~~~~-~~~gy~~~i~~~~-~~~~~~~~~i~~l~~~~vdgiIl~~~~~---~~~~ 78 (276)
T 3jy6_A 5 QSSKLIAVIVAN-IDDYFSTELFKGISSIL-ESRGYIGVLFDAN-ADIEREKTLLRAIGSRGFDGLILQSFSN---PQTV 78 (276)
T ss_dssp CCCCEEEEEESC-TTSHHHHHHHHHHHHHH-HTTTCEEEEEECT-TCHHHHHHHHHHHHTTTCSEEEEESSCC---HHHH
T ss_pred CCCCEEEEEECC-CCCHHHHHHHHHHHHHH-HHCCCEEEEEECC-CCHHHHHHHHHHHHHCCCCEEEEECCCC---HHHH
T ss_conf 789999999399-98989999999999999-9869999999489-9989999999999966998999953689---6999
Q ss_pred HHHHHCCC--CCCCCCCCCC-----CHHHHHHHHHHHHHHHHCCCCEEEC--HHHCCC-CHHHHHHHHHHHHCCCCEEEE
Q ss_conf 99973686--5478742013-----0124335999999988568928750--011168-215679999998587970774
Q gi|254780234|r 76 FPMFRANA--LYEGYYLLGT-----AIARPLIAKYLVDIANETGADAIAH--GSTGKG-NDQVRFELSAYSLNSDIEIIA 145 (404)
Q Consensus 76 ~~~I~ana--~Yeg~Ypl~t-----slaRplia~~lv~~a~~~ga~~iaH--G~TgkG-NDQvRFe~~~~~l~P~l~via 145 (404)
..+++.+. ..-++++-.. ...=.-.+..+++...+.|..-|+- |...-. +-|.||+....+ .++..+ .
T Consensus 79 ~~~~~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~~r~~g~~~a-~~~~~~-~ 156 (276)
T 3jy6_A 79 QEILHQQMPVVSVDREMDACPWPQVVTDNFEAAKAATTAFRQQGYQHVVVLTSELELSRTRQERYRGILAA-AQDVDV-L 156 (276)
T ss_dssp HHHHTTSSCEEEESCCCTTCSSCEEECCHHHHHHHHHHHHHTTTCCEEEEEEECSTTCHHHHHHHHHHHTT-CSEEEE-E
T ss_pred HHHHHCCCCEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHH-HHHCCC-C
T ss_conf 99997499999976777888988899647998777778898735662138705731101387899999999-875597-5
Q ss_pred EECCCCCC---CHHHHHHHHHHHC
Q ss_conf 41006876---3799999999708
Q gi|254780234|r 146 PWRHWSFK---GRQDLIDFAEKHA 166 (404)
Q Consensus 146 P~Rd~~~~---sRe~~i~ya~~~g 166 (404)
++...++. +.+..-++++++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~~~~ 180 (276)
T 3jy6_A 157 EVSESSYNHSEVHQRLTQLITQND 180 (276)
T ss_dssp EECSSSCCHHHHHHHHHHHHHSSS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 321356767889999999876401
No 126
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium LT2} SCOP: c.93.1.1 PDB: 1tm2_A 3ejw_A*
Probab=32.90 E-value=21 Score=14.53 Aligned_cols=14 Identities=14% Similarity=0.159 Sum_probs=5.5
Q ss_pred HHHHHHHHHCCCCE
Q ss_conf 99999988568928
Q gi|254780234|r 102 KYLVDIANETGADA 115 (404)
Q Consensus 102 ~~lv~~a~~~ga~~ 115 (404)
+.+-+.|++.|.+.
T Consensus 23 ~G~~~~a~~~g~~v 36 (316)
T 1tjy_A 23 NGAQEAGKALGIDV 36 (316)
T ss_dssp HHHHHHHHHHTCEE
T ss_pred HHHHHHHHHCCCEE
T ss_conf 99999999829989
No 127
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=32.82 E-value=21 Score=14.52 Aligned_cols=67 Identities=15% Similarity=0.064 Sum_probs=37.8
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCC-HHHHHHHHHHHCCCEEEEEECHHHHH
Q ss_conf 98777789999147725999999998718986999994578711-06899999997398079982008999
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGE-ELKIASDKARLLGAKEVYVKDLRREF 70 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~-d~~~~~~~A~~~Ga~~~~v~D~r~ef 70 (404)
|++ ++||++-=+.|.=-+.++..|. +.|++|++++-+....+ +...........|+ +.+..|+.+..
T Consensus 1 m~~-k~KILVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~~~~~~~~~~~~~~~~~~~v-~~v~~D~~~~~ 68 (313)
T 1qyd_A 1 MDK-KSRVLIVGGTGYIGKRIVNASI-SLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA-KLIEASLDDHQ 68 (313)
T ss_dssp -CC-CCCEEEESTTSTTHHHHHHHHH-HTTCCEEEECCSCCSSCHHHHHHHHHHHTTTC-EEECCCSSCHH
T ss_pred CCC-CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCCCCCHHHHHHHHHHCCCCC-EEEEEECCCCH
T ss_conf 989-9989998998489999999999-78896999989974356566777765204896-89996421104
No 128
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B
Probab=32.43 E-value=21 Score=14.47 Aligned_cols=148 Identities=18% Similarity=0.217 Sum_probs=81.1
Q ss_pred HHHHHHHHHHCCCEEEEEE--EECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 9999999871898699999--45787110689999999739807998200899999879999736865478742013012
Q gi|254780234|r 19 SIILKWLQVEKGLEVIVFI--ADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANALYEGYYLLGTAIA 96 (404)
Q Consensus 19 Sv~i~~L~~e~g~eVi~~~--~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~Yeg~Ypl~tsla 96 (404)
-++..||+ ..||+|.-++ -|++ |.|.++|.+.|.+. .++-+.+.+.|.-.+=.-|..+-..||-.|--
T Consensus 48 D~l~R~l~-~~G~~V~~v~nitDid-----dKi~~~A~~~g~~~---~e~~~~~~~~f~~~~~~L~i~~~~~~~r~t~~- 117 (461)
T 1li5_A 48 DVVARYLR-FLGYKLKYVRNITDID-----DKIIKRANENGESF---VAMVDRMIAEMHKDFDALNILRPDMEPRATHH- 117 (461)
T ss_dssp HHHHHHHH-HHTCEEEEEECBBCCS-----HHHHHHHHHTTCCH---HHHHHHHHHHHHHHHHHTTCCCCSBCCBGGGC-
T ss_pred HHHHHHHH-HCCCCEEEEEEECCCC-----HHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHCCCCCCEEECCCHH-
T ss_conf 99999999-7599518997416123-----89999999849599---99999999999999999579999874111489-
Q ss_pred HHHHHHHHHHHHHHCCCCEEE-CHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 433599999998856892875-0011168215679999998587970774410068763799999999708967566567
Q gi|254780234|r 97 RPLIAKYLVDIANETGADAIA-HGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQDLIDFAEKHAIPIDKNKRG 175 (404)
Q Consensus 97 Rplia~~lv~~a~~~ga~~ia-HG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~~~~~~ 175 (404)
-+-|. .+++...+.|.-+.. .|+ |-|+.. . .|+..-+ ++.+..+......+..+..|+
T Consensus 118 i~~~i-~~i~~L~~~g~aY~~~~g~-------vyf~~~--~-~~~yg~l---------~~~~~~~~~~~~~~~~~~~K~- 176 (461)
T 1li5_A 118 IAEII-ELTEQLIAKGHAYVADNGD-------VMFDVP--T-DPTYGVL---------SRQDLDQLQAGARVDVVDDKR- 176 (461)
T ss_dssp HHHHH-HHHHHHHHTTSEEECTTSC-------EEECGG--G-CTTTTTT---------TTC----------------CC-
T ss_pred HHHHH-HHHHHHHHCCCEEEECCCC-------EECCCC--C-CCCCCCC---------CCCCCCCCCCCCCCCCCCCCC-
T ss_conf 99999-9999998679889726886-------733565--5-3011551---------100200012467656565678-
Q ss_pred CCCCCCCHHHHCCCCCCC-CCCCCCC
Q ss_conf 886415724311545763-2458457
Q gi|254780234|r 176 EAPFSIDTNLLHSSSEGR-VLEDPSQ 200 (404)
Q Consensus 176 ~~~yS~D~Nlwg~S~Egg-~Ledp~~ 200 (404)
-..|=-||..+-.|. ..+.||.
T Consensus 177 ---~~~DF~Lwk~~~~~e~~w~spWG 199 (461)
T 1li5_A 177 ---NPMDFVLWKMSKEGEPSWPSPWG 199 (461)
T ss_dssp ---STTCEEEEEECCTTSCCBCCTTC
T ss_pred ---CHHHHHHCCCCCCCCCCCCCCCC
T ss_conf ---83646653878899876678877
No 129
>2pfy_A Putative exported protein; extracytoplasmic solute receptor, tripartite ATP independent periplasmic transport, pyroglutamic acid; 1.95A {Bordetella pertussis tohama I}
Probab=31.41 E-value=22 Score=14.36 Aligned_cols=69 Identities=9% Similarity=0.008 Sum_probs=29.8
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCEEEEEE-EECCEEEEEC
Q ss_conf 999999708967566567886415724311545763245845768201001465812279996389999-9502478751
Q gi|254780234|r 158 LIDFAEKHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVSPEEAPDTPTTIRID-FQRGDPIAIN 236 (404)
Q Consensus 158 ~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~p~~ap~~pe~v~I~-Fe~G~PVain 236 (404)
..+.++.-|. .|-++.-+=.-.+.+-|.++-..+.++. .... ...+.++ -+.... +--..++-+|
T Consensus 149 ~~~~~~~lGa---------~pv~~~~~evy~aLq~G~vDg~~~~~~~-~~~~-~~~ev~~---~~~~~~~~~~~~~~~~n 214 (301)
T 2pfy_A 149 TSHMAALMGA---------VPTTVQTPEVPQAFSTGVIDAMLTSPAT-GVDS-QAWDYVK---YYYDAQAFIPQSFVIAN 214 (301)
T ss_dssp HHHHHHHTTS---------EEEECCGGGHHHHHHTTSCSBEEECHHH-HHHT-TGGGTCC---EEEECCCCCCEEEEEEE
T ss_pred HHHHHHHCCC---------CCCCCCCCCHHHHHHCCCEECCCCCCCC-CCCC-CCCEEEE---EEECCCCCHHHHHHHHH
T ss_conf 9999997588---------5102444201467765841034247300-0123-3421445---77338852048899982
Q ss_pred CEEC
Q ss_conf 6231
Q gi|254780234|r 237 GQVM 240 (404)
Q Consensus 237 G~~~ 240 (404)
.+..
T Consensus 215 ~~~~ 218 (301)
T 2pfy_A 215 KRAF 218 (301)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9988
No 130
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,, transport protein; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=30.80 E-value=22 Score=14.29 Aligned_cols=28 Identities=14% Similarity=0.183 Sum_probs=13.1
Q ss_pred ECHHHCCCCHHHHHHHHHHH---HCCCCEEE
Q ss_conf 50011168215679999998---58797077
Q gi|254780234|r 117 AHGSTGKGNDQVRFELSAYS---LNSDIEII 144 (404)
Q Consensus 117 aHG~TgkGNDQvRFe~~~~~---l~P~l~vi 144 (404)
.+|.-+-.+.+.|.+....+ -+|+..+.
T Consensus 146 ~~g~~~~~~~~~R~~g~~~~l~~~~~~~~~~ 176 (309)
T 2fvy_A 146 LKGEPGHPDAEARTTYVIKELNDKGIKTEQL 176 (309)
T ss_dssp EECSTTCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EECCCCCCCHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 9578877619999987887687609873145
No 131
>3cg0_A Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; signal receiver domain; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=30.73 E-value=22 Score=14.28 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=16.6
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 7778999914772599999999871898699999
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFI 37 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~ 37 (404)
++.||++.=---.--..+-.+| ++.||+|++++
T Consensus 8 ~~~~ILvVDD~~~~~~~l~~~L-~~~G~~v~~~a 40 (140)
T 3cg0_A 8 DLPGVLIVEDGRLAAATLRIQL-ESLGYDVLGVF 40 (140)
T ss_dssp CCCEEEEECCBHHHHHHHHHHH-HHHTCEEEEEE
T ss_pred CCCEEEEEECCHHHHHHHHHHH-HHCCCEEEEEE
T ss_conf 9998999979999999999999-98799899997
No 132
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.97A {Archaeoglobus fulgidus}
Probab=30.70 E-value=22 Score=14.28 Aligned_cols=102 Identities=23% Similarity=0.162 Sum_probs=49.5
Q ss_pred CCEEEEEECCCHHHH-HHHHHH---HHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 778999914772599-999999---8718986999994578711068999999973980799820089999987999973
Q gi|254780234|r 5 VKKVVLAYSGGLDTS-IILKWL---QVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFR 80 (404)
Q Consensus 5 ~kkVvlaySGGLDTS-v~i~~L---~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ 80 (404)
.++|++|.--|=|.| -++.|. ....|.+++.+++--......+....++. +..++....+-.
T Consensus 24 ~~~IlVavD~~S~~s~~al~~A~~~A~~~~~~l~lvhv~~~~~~~~~~~~~~~~--------------~~l~~~~~~~~~ 89 (155)
T 3dlo_A 24 YMPIVVAVDKKSDRAERVLRFAAEEARLRGVPVYVVHSLPGGGRTKDEDIIEAK--------------ETLSWAVSIIRK 89 (155)
T ss_dssp CCCEEEECCSSSHHHHHHHHHHHHHHHHHTCCEEEEEEECCSTTSCHHHHHHHH--------------HHHHHHHHHHHH
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHH--------------HHHHHHHHHHHH
T ss_conf 473899987959899999999999999839969999974388777667899999--------------999999999998
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCC
Q ss_conf 68654787420130124335999999988568928750011168
Q gi|254780234|r 81 ANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKG 124 (404)
Q Consensus 81 ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkG 124 (404)
.+..++-.... .-.. .++.+++.|++.++|.|.=|+.|++
T Consensus 90 ~~~~~~~~~~v--~~g~--~~~~I~~~a~~~~adLIV~G~~~~~ 129 (155)
T 3dlo_A 90 EGAEGEEHLLV--RGKE--PPDDIVDFADEVDAIAIVIGIRKRS 129 (155)
T ss_dssp TTCCEEEEEEE--SSSC--HHHHHHHHHHHTTCSEEEEECCEEC
T ss_pred HCCCCEEEEEE--ECCC--HHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 49994899999--5789--8999999998729989985689999
No 133
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=30.61 E-value=22 Score=14.27 Aligned_cols=58 Identities=17% Similarity=0.144 Sum_probs=36.8
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHH---HHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECH
Q ss_conf 98777789999147725999999998---7189869999945787110689999999739807998200
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQ---VEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDL 66 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~---~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~ 66 (404)
|++...||++..||+ .| .+...++ .+...+|+++..|=. ....+.|.+.|. +.++++.
T Consensus 8 ~~~~p~riavl~SG~-Gs-nl~aLi~~~~~~~~~~iv~vi~~~~-----~~~~~~A~~~gI-p~~~i~~ 68 (215)
T 3da8_A 8 PPSAPARLVVLASGT-GS-LLRSLLDAAVGDYPARVVAVGVDRE-----CRAAEIAAEASV-PVFTVRL 68 (215)
T ss_dssp CCCSSEEEEEEESSC-CH-HHHHHHHHSSTTCSEEEEEEEESSC-----CHHHHHHHHTTC-CEEECCG
T ss_pred CCCCCCEEEEEECCC-CH-HHHHHHHHHCCCCCCEEEEEEECCC-----HHHHHHHHHCCC-CEEEEEC
T ss_conf 999988899998368-26-5999999637799977999996785-----668899998399-7377405
No 134
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics, protein structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=30.61 E-value=22 Score=14.27 Aligned_cols=130 Identities=12% Similarity=-0.026 Sum_probs=58.8
Q ss_pred CCEEEEEECCCH-----HHHHH---HHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHH--HHHHHHH
Q ss_conf 778999914772-----59999---9999871898699999457871106899999997398079982008--9999987
Q gi|254780234|r 5 VKKVVLAYSGGL-----DTSII---LKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLR--REFVRDF 74 (404)
Q Consensus 5 ~kkVvlaySGGL-----DTSv~---i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r--~ef~~~~ 74 (404)
-+.|.|.++-+- -+.++ ..-+ .++||+++-+..+-. .++...+.+....-.+.-+++.... +.+.+..
T Consensus 8 s~~Iglv~~~~~~~~~f~~~~~~gi~~~~-~~~g~~l~v~~~~~~-~~~~~~~~~~l~~~~vDgiIi~~~~~~~~~~~~~ 85 (288)
T 3gv0_A 8 TNVIALVLSVDEELMGFTSQMVFGITEVL-STTQYHLVVTPHIHA-KDSMVPIRYILETGSADGVIISKIEPNDPRVRFM 85 (288)
T ss_dssp CCEEEEECBCCCCSSCHHHHHHHHHHHHH-TTSSCEEEECCBSSG-GGTTHHHHHHHHHTCCSEEEEESCCTTCHHHHHH
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHH-HHCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH
T ss_conf 99699995677667869999999999999-987998999968999-6999999999995898689984776764999999
Q ss_pred ---HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHH--HCCCCHHHHHHHHHHH
Q ss_conf ---9999736865478742013012433599999998856892875001--1168215679999998
Q gi|254780234|r 75 ---VFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGS--TGKGNDQVRFELSAYS 136 (404)
Q Consensus 75 ---i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~--TgkGNDQvRFe~~~~~ 136 (404)
=.|.+..+....+...-+......-.++.+++...+.|..-|+.-+ .+..+.+.|.+....+
T Consensus 86 ~~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~g~~~I~~i~~~~~~~~~~~R~~Gf~~a 152 (288)
T 3gv0_A 86 TERNMPFVTHGRSDMGIEHAFHDFDNEAYAYEAVERLAQCGRKRIAVIVPPSRFSFHDHARKGFNRG 152 (288)
T ss_dssp HHTTCCEEEESCCCSSCCCEEEEECHHHHHHHHHHHHHHTTCCEEEEECCCTTSHHHHHHHHHHHHH
T ss_pred HHCCCCEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 9769969991765788998489708999999999999862996089964875432387888999999
No 135
>3l6u_A ABC-type sugar transport system periplasmic component; structural genomics, nysgrc, target 11006S, PSI-2, protein structure initiative; 1.90A {Exiguobacterium sibiricum}
Probab=30.50 E-value=23 Score=14.26 Aligned_cols=160 Identities=9% Similarity=0.113 Sum_probs=60.8
Q ss_pred CCCEEEEEECCCHHHHHHHHHHH------HHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHH-
Q ss_conf 77789999147725999999998------71898699999457871106899999997398079982008999998799-
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQ------VEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVF- 76 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~------~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~- 76 (404)
+.+.|.+.++.--+ ++-...+. .+.||+++-++.+--...+.+.+ +.+...|+.-.++.-.........+.
T Consensus 7 k~~~Igvi~~~~~~-~f~~~~~~~i~~~a~~~Gy~~~~~~~~~~~~~~~~~i-~~li~~~~DgIii~~~~~~~~~~~l~~ 84 (293)
T 3l6u_A 7 KRNIVGFTIVNDKH-EFAQRLINAFKAEAKANKYEALVATSQNSRISEREQI-LEFVHLKVDAIFITTLDDVYIGSAIEE 84 (293)
T ss_dssp --CEEEEEESCSCS-HHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHH-HHHHHTTCSEEEEECSCTTTTHHHHHH
T ss_pred CCCEEEEEEECCCC-HHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH-HHHHHCCCCEEEEECCCCCCHHHHHHH
T ss_conf 99999999968999-8999999999999998699899997999989999999-999976999999943322013899999
Q ss_pred ------HHHHCCCCCCCC-CC--CCCCH--HHHHHHHHHHHHH-----HHCCCCEEECHHHCCCCHHHHHHHHHHHHC--
Q ss_conf ------997368654787-42--01301--2433599999998-----856892875001116821567999999858--
Q gi|254780234|r 77 ------PMFRANALYEGY-YL--LGTAI--ARPLIAKYLVDIA-----NETGADAIAHGSTGKGNDQVRFELSAYSLN-- 138 (404)
Q Consensus 77 ------~~I~ana~Yeg~-Yp--l~tsl--aRplia~~lv~~a-----~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~-- 138 (404)
|.|..+....+. +. ..+.- +-...++.+.+.. +..+.-++.+|..+..+-+-|......++.
T Consensus 85 ~~~~giPVV~~~~~~~~~~~~~~v~~~~~~~g~~~a~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~g~~~~~~~~ 164 (293)
T 3l6u_A 85 AKKAGIPVFAIDRMIRSDAVVSSITSNNQMIGEQLASYIKNELIKQTGRSTGRIVEITGTANVYTTNERHRGFLKGIENE 164 (293)
T ss_dssp HHHTTCCEEEESSCCCCTTCSEEEEECHHHHHHHHHHHHHHHHHHHHSCSCEEEEEEECSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHCCCCEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 99869979971777787763305713632212789999989999853787415899617987626899999888666545
Q ss_pred CCCEEEEEEC-CCCCC-CHHHHHHHHHHH
Q ss_conf 7970774410-06876-379999999970
Q gi|254780234|r 139 SDIEIIAPWR-HWSFK-GRQDLIDFAEKH 165 (404)
Q Consensus 139 P~l~viaP~R-d~~~~-sRe~~i~ya~~~ 165 (404)
|..++...+- +|+.. +.+...++++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (293)
T 3l6u_A 165 PTLSIVDSVSGNYDPVTSERVMRQVIDSG 193 (293)
T ss_dssp TTEEEEEEEECTTCHHHHHHHHHHHHHTT
T ss_pred CCCCEEHHHHCCCCHHHHHHHHHHHHCCC
T ss_conf 88420011100000477899999874228
No 136
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=30.47 E-value=19 Score=14.82 Aligned_cols=89 Identities=9% Similarity=0.022 Sum_probs=37.4
Q ss_pred HHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECH--HHHHHHHHH---HHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 7189869999945787110689999999739807998200--899999879---99973686547874201301243359
Q gi|254780234|r 27 VEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDL--RREFVRDFV---FPMFRANALYEGYYLLGTAIARPLIA 101 (404)
Q Consensus 27 ~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~--r~ef~~~~i---~~~I~ana~Yeg~Ypl~tslaRplia 101 (404)
.++||.++-+..+-. .+......+....-...-+++.+. .+++.+... .|.|..+..-.+ ++ +....-..-+
T Consensus 26 ~~~gy~l~~~~~~~~-~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~iPvV~~~~~~~~-~~-~V~~D~~~a~ 102 (276)
T 2h0a_A 26 LEQRYDLALFPILSL-ARLKRYLENTTLAYLTDGLILASYDLTERFEEGRLPTERPVVLVDAQNPR-YD-SVYLDNRLGG 102 (276)
T ss_dssp GGGTCEEEECCCCSC-CCCC---------CCCSEEEEESCCCC------CCSCSSCEEEESSCCTT-SE-EEEECSHHHH
T ss_pred HHCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCC-CC-EEEECCHHHH
T ss_conf 986998999978998-79999999999855999899954779989999986439948999413688-89-8995658999
Q ss_pred HHHHHHHHHCCCCEEEC
Q ss_conf 99999988568928750
Q gi|254780234|r 102 KYLVDIANETGADAIAH 118 (404)
Q Consensus 102 ~~lv~~a~~~ga~~iaH 118 (404)
+.+++...+.|..-+.-
T Consensus 103 ~~~~~~L~~~g~~~i~~ 119 (276)
T 2h0a_A 103 RLAGAYLARFPGPIFAI 119 (276)
T ss_dssp HHHHHHHTTSSSCEEEE
T ss_pred HHHHHHHHHCCCCEEEE
T ss_conf 99999998718962699
No 137
>1tlt_A Putative oxidoreductase (virulence factor MVIM homolog); structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=29.58 E-value=23 Score=14.15 Aligned_cols=123 Identities=15% Similarity=0.016 Sum_probs=63.6
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCE------------EEEEECHHH
Q ss_conf 98777789999147725999999998718986999994578711068999999973980------------799820089
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAK------------EVYVKDLRR 68 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~------------~~~v~D~r~ 68 (404)
|+.++=||.+.=.|..-....++-|+...+.+|++++ |..+ +.+++-+...|+. +.+++-...
T Consensus 1 m~mkkikigiiG~G~~~~~~~~~~l~~~~~~~l~av~-d~~~----~~~~~~~~~~~~~~~~~~~~l~~~~D~V~I~tp~ 75 (319)
T 1tlt_A 1 MSLKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAW-SPTR----AKALPICESWRIPYADSLSSLAASCDAVFVHSST 75 (319)
T ss_dssp ----CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEE-CSSC----TTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCT
T ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEE-CCCH----HHHHHHHHHHCCCCCCCHHHHHCCCCEEEEECCC
T ss_conf 9987888999938899999999999739996899998-8999----9999999982998228899985699999994886
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHC
Q ss_conf 9999879999736865478742013012433599999998856892875001116821567999999858
Q gi|254780234|r 69 EFVRDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLN 138 (404)
Q Consensus 69 ef~~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~ 138 (404)
.+-.+++..++.++----=.-|++++++ -++.+++.+++.++.... |=+.||.-.+..+.
T Consensus 76 ~~H~~~~~~al~~gkhv~~EKP~~~~~~---e~~~l~~~~~~~~~~~~v-------~~~~r~~p~~~~~k 135 (319)
T 1tlt_A 76 ASHFDVVSTLLNAGVHVCVDKPLAENLR---DAERLVELAARKKLTLMV-------GFNRRFAPLYGELK 135 (319)
T ss_dssp THHHHHHHHHHHTTCEEEEESSSCSSHH---HHHHHHHHHHHTTCCEEE-------ECGGGGCHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEEEECCCHHHHH---HHHHHHHHHHHCCCEEEE-------EECCCCCHHHHHHH
T ss_conf 6668999999861987999636502466---777777776503631688-------63134686999999
No 138
>2jug_A TUBC protein; docking domain, dimer, nonribosomal peptide synthetase, tubulysin, ligase, phosphopantetheine, biosynthetic protein; NMR {Angiococcus disciformis}
Probab=29.49 E-value=18 Score=14.98 Aligned_cols=70 Identities=17% Similarity=0.224 Sum_probs=39.5
Q ss_pred HHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECC-CCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 9999999885689287500111682156799999985879707744100-687637999999997089675665678864
Q gi|254780234|r 101 AKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRH-WSFKGRQDLIDFAEKHAIPIDKNKRGEAPF 179 (404)
Q Consensus 101 a~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd-~~~~sRe~~i~ya~~~gIpv~~~~~~~~~y 179 (404)
+..++...++.|+..+.-| ||.||..--.++.|+ .+. ..- .+++.|+|+++........... .|.
T Consensus 7 ~~~lL~~l~~~GI~L~~e~------~kLr~~ap~g~lt~e------l~~~Lk~-~K~eiI~~L~~~~~~~~~~~~i-~P~ 72 (78)
T 2jug_A 7 AGALLAHAASLGVRLWVEG------ERLRFQAPPGVMTPE------LQSRLGG-ARHELIALLRQLQPSSQGGSLL-APV 72 (78)
T ss_dssp HHHHHHHHHHHTCEEEEET------TEEEEECCTTTTCHH------HHHHHTT-CHHHHHHHHHHHCCCCCSSSSC-CCS
T ss_pred HHHHHHHHHHCCCEEEEEC------CEEEEECCCCCCCHH------HHHHHHH-HHHHHHHHHHHCCCCCCCCCCC-CCC
T ss_conf 9999999998898899989------999996787779999------9999999-8999999998506566777787-878
Q ss_pred CCCHH
Q ss_conf 15724
Q gi|254780234|r 180 SIDTN 184 (404)
Q Consensus 180 S~D~N 184 (404)
+.|.+
T Consensus 73 ~R~g~ 77 (78)
T 2jug_A 73 ARNGR 77 (78)
T ss_dssp CSCSC
T ss_pred CCCCC
T ss_conf 99999
No 139
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, GALE, NAD, SYK, UDP, N- acetylglucosamine, N-acetylgalactosamine, UDP-GLC; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=29.10 E-value=24 Score=14.09 Aligned_cols=115 Identities=11% Similarity=0.034 Sum_probs=58.3
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--CCHHHHHHHHH--HHCCCEEEEEECHHHHHHHHHHHHHH
Q ss_conf 777899991477259999999987189869999945787--11068999999--97398079982008999998799997
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--GEELKIASDKA--RLLGAKEVYVKDLRREFVRDFVFPMF 79 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~~d~~~~~~~A--~~~Ga~~~~v~D~r~ef~~~~i~~~I 79 (404)
.+|+|++-=+.|.--|-++..|. ++|++|+++- +... ...++.++... ......+++..|+++.-. ......
T Consensus 26 ~~K~~LVTG~tGfIGs~lv~~L~-~~g~~V~~vd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~--~~~~~~ 101 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLL-KLDQKVVGLD-NFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDD--CNNACA 101 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEE-CCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHH--HHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEE-CCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHH--HHHHHC
T ss_conf 99989996788789999999999-7859899997-8887636567888865301246880899782458899--864103
Q ss_pred HCCCCCCCCCCC--CCCHHHHH--------HHHHHHHHHHHCCCCEEECHHHC
Q ss_conf 368654787420--13012433--------59999999885689287500111
Q gi|254780234|r 80 RANALYEGYYLL--GTAIARPL--------IAKYLVDIANETGADAIAHGSTG 122 (404)
Q Consensus 80 ~ana~Yeg~Ypl--~tslaRpl--------ia~~lv~~a~~~ga~~iaHG~Tg 122 (404)
.....+.-.-.- ..+-..|. -...+++.|++.++.-+.+-||.
T Consensus 102 ~~d~vi~~aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~ 154 (352)
T 1sb8_A 102 GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASS 154 (352)
T ss_dssp TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 67535530101557623368677666477999999999997699869995466
No 140
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=29.06 E-value=24 Score=14.09 Aligned_cols=120 Identities=11% Similarity=0.040 Sum_probs=57.9
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCC------------CHHHHHHHHHHHCCCEEEEEECHHH
Q ss_conf 9877778999914772599999999871898699999457871------------1068999999973980799820089
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQG------------EELKIASDKARLLGAKEVYVKDLRR 68 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~------------~d~~~~~~~A~~~Ga~~~~v~D~r~ 68 (404)
||.++=||.+.=.|..-...-++.|+...+++|++++ |.-+. ++++++-+ .-.. +.+++-.-.
T Consensus 1 m~~~~lrvgiiG~G~~g~~~h~~~~~~~~~~~ivav~-d~~~~~a~~~~~~~~~~~~~~ell~---~~~i-DaV~I~tp~ 75 (362)
T 3fhl_A 1 MSLEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIV-ERSKELSKERYPQASIVRSFKELTE---DPEI-DLIVVNTPD 75 (362)
T ss_dssp --CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEE-CSSCCGGGTTCTTSEEESCSHHHHT---CTTC-CEEEECSCG
T ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEE-CCCHHHHHHHCCCCCCCCCHHHHHC---CCCC-CEEEECCCC
T ss_conf 9866759999936899999999999839892999998-4999999976789984399999964---9999-889994894
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHH
Q ss_conf 9999879999736865478742013012433599999998856892875001116821567
Q gi|254780234|r 69 EFVRDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVR 129 (404)
Q Consensus 69 ef~~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvR 129 (404)
.+--+++..+++++----=.=|++++ .--++.+++.+++.|..+. =|.+.+-+..++
T Consensus 76 ~~H~~~~~~al~aGkhV~~EKPla~~---~~ea~~l~~~a~~~~~~~~-v~~~~r~~p~~~ 132 (362)
T 3fhl_A 76 NTHYEYAGMALEAGKNVVVEKPFTST---TKQGEELIALAKKKGLMLS-VYQNRRWDADFL 132 (362)
T ss_dssp GGHHHHHHHHHHTTCEEEEESSCCSS---HHHHHHHHHHHHHHTCCEE-EECGGGGSHHHH
T ss_pred HHHHHHHHHHHHCCCCCHHCCCCCCC---CCCCHHHHHHHHHCCCCEE-EEEEEECCHHHH
T ss_conf 78899999999749975102875312---2211157788763252211-101210202699
No 141
>3g1w_A Sugar ABC transporter; sugar-binding protein, target 11229F, transport protein, structural genomics, PSI-2; 2.02A {Bacillus halodurans c-125}
Probab=28.51 E-value=24 Score=14.02 Aligned_cols=162 Identities=13% Similarity=-0.027 Sum_probs=64.8
Q ss_pred CCCCCCEEEEEECCCHHHHHHHH-------HHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHH
Q ss_conf 98777789999147725999999-------99871898699999457871106899999997398079982008999998
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILK-------WLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRD 73 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~-------~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~ 73 (404)
||.+++-+++-+-.|.| +-.. .. ++.|+++.-+...-+..+.....-+.+...|+.-+++.-.-..-..+
T Consensus 1 ~~~~~~~~~i~~~~~~~--f~~~v~~G~~~aa-~~~g~~l~~~~~~~~d~~~q~~~l~~~i~~~~dgIii~~~d~~~~~~ 77 (305)
T 3g1w_A 1 MSLNETYMMITFQSGMD--YWKRCLKGFEDAA-QALNVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPVELTD 77 (305)
T ss_dssp ----CEEEEEESSTTST--HHHHHHHHHHHHH-HHHTCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTTTHH
T ss_pred CCCCCEEEEEECCCCCH--HHHHHHHHHHHHH-HHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH
T ss_conf 99888799995899983--9999999999999-97299899997999999999999999997698999997885676899
Q ss_pred HHHHHHHCC-------CC-CCCCCCCCCCHHHHHHHHHHHHHH----HHCCCCEEECHHHCCCCHHHHH---HHHHHHHC
Q ss_conf 799997368-------65-478742013012433599999998----8568928750011168215679---99999858
Q gi|254780234|r 74 FVFPMFRAN-------AL-YEGYYLLGTAIARPLIAKYLVDIA----NETGADAIAHGSTGKGNDQVRF---ELSAYSLN 138 (404)
Q Consensus 74 ~i~~~I~an-------a~-Yeg~Ypl~tslaRplia~~lv~~a----~~~ga~~iaHG~TgkGNDQvRF---e~~~~~l~ 138 (404)
.+..+..++ .. ..+.........-.-.++.+.+.+ ...+.-++..+ .+.-+-+-|. .-+++..+
T Consensus 78 ~l~~~~~~gIpvv~~d~~~~~~~~~~~v~~d~~~~g~~aa~~l~~~~~~~~~~~~~~~-~~~~~~~~R~~Gf~~~l~~~~ 156 (305)
T 3g1w_A 78 TINKAVDAGIPIVLFDSGAPDSHAHSFLGTNNYNAGMNAAYKMAELLDGEGEVAVITL-PNQLNHQERTTGFKETLEAEF 156 (305)
T ss_dssp HHHHHHHTTCCEEEESSCCTTSCCSCEEECCHHHHHHHHHHHHHHHTTTCEEEEEEEC-TTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCCEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEC-CCCHHHHHHHHHHHHHHHHHC
T ss_conf 9999997699568873044334541330567188999999999997303675178522-432178899999999999868
Q ss_pred CCCEEEEE-ECCCCC-CCHHHHHHHHHHHC
Q ss_conf 79707744-100687-63799999999708
Q gi|254780234|r 139 SDIEIIAP-WRHWSF-KGRQDLIDFAEKHA 166 (404)
Q Consensus 139 P~l~viaP-~Rd~~~-~sRe~~i~ya~~~g 166 (404)
|++++..- .-+|+. .+++...++++++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p 186 (305)
T 3g1w_A 157 PAIEVIAVEDGRGDSLHSRRVAHQLLEDYP 186 (305)
T ss_dssp TTEEEEEEEECTTCHHHHHHHHHHHHHHCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHCCC
T ss_conf 997311231478757889999999985089
No 142
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=28.43 E-value=24 Score=14.01 Aligned_cols=35 Identities=11% Similarity=0.010 Sum_probs=22.0
Q ss_pred CCCEEEEEECCCHHHHHHH---HHHHHHCCCEEEEEEE
Q ss_conf 7778999914772599999---9998718986999994
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIIL---KWLQVEKGLEVIVFIA 38 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i---~~L~~e~g~eVi~~~~ 38 (404)
+.+||+++.-+.=-+-.++ .+|....+++++.+++
T Consensus 21 ~~~~ILvp~D~S~~s~~al~~A~~la~~~~~~i~llhv 58 (294)
T 3loq_A 21 QSNAMLLPTDLSENSFKVLEYLGDFKKVGVEEIGVLFV 58 (294)
T ss_dssp TTCEEEEECCSCTGGGGGGGGHHHHHHTTCCEEEEECC
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 69979999689989999999999999876998999999
No 143
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=28.39 E-value=24 Score=14.01 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHH
Q ss_conf 59999999885689287500111682156799999985
Q gi|254780234|r 100 IAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSL 137 (404)
Q Consensus 100 ia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l 137 (404)
.++.+++...+.+.-++-.|.....+.+.|.+....++
T Consensus 112 ~~~~l~~~~~~~~~~~~~~g~~~~~~~~~r~~g~~~~~ 149 (271)
T 2dri_A 112 AGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAV 149 (271)
T ss_dssp HHHHHHHHHCTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 99999996799855999706777622779999999999
No 144
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP binding, purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=28.24 E-value=25 Score=13.99 Aligned_cols=139 Identities=17% Similarity=0.123 Sum_probs=68.4
Q ss_pred EEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHH-HHHHHHHHHHHHCCCCC
Q ss_conf 89999147725999999998718986999994578711068999999973980799820089-99998799997368654
Q gi|254780234|r 7 KVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRR-EFVRDFVFPMFRANALY 85 (404)
Q Consensus 7 kVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~-ef~~~~i~~~I~ana~Y 85 (404)
||++.=|||=....+-+..+.....+|+|.--|-|- ..-+ +.+.+|..+ +.+.+++.. .+-..
T Consensus 2 kvliiG~GgrEha~~~~l~~~~~~~~~~~~~~N~g~------------~~~~-~~~~~~~~d~~~i~~~~~~-~~id~-- 65 (424)
T 2yw2_A 2 KVLVVGNGGREHAIAWKVAQSPLVKELYVAKGNAGI------------WEIA-KRVDISPTDVEKLAEFAKN-EGVDF-- 65 (424)
T ss_dssp EEEEEESSHHHHHHHHHHTTCTTCSEEEEEECCTTG------------GGTS-EEECSCTTCHHHHHHHHHH-HTCSE--
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCHHH------------HHHC-CEEEECCCCHHHHHHHHHH-HCCCE--
T ss_conf 899989589999999999858998889998898889------------8543-0086288999999999999-69999--
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHC--CCCHHHHHHHHHHHHCCCCEEEEE-ECCCCCCCHHHHHHHH
Q ss_conf 7874201301243359999999885689287500111--682156799999985879707744-1006876379999999
Q gi|254780234|r 86 EGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTG--KGNDQVRFELSAYSLNSDIEIIAP-WRHWSFKGRQDLIDFA 162 (404)
Q Consensus 86 eg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~Tg--kGNDQvRFe~~~~~l~P~l~viaP-~Rd~~~~sRe~~i~ya 162 (404)
..| ...-|+ +..+++..++.|..++...... .-+|...+-..++.+ .|-+| |+ -+++.++..+++
T Consensus 66 --vi~---g~e~~l-~~~~a~~l~~~gi~~~gp~~~~~~~~~~K~~~k~~~~~~----gipt~~~~--~~~~~~ea~~~~ 133 (424)
T 2yw2_A 66 --TIV---GPEAPL-VEGIVDEFEKRGLKIFGPNKEAAKLEGSKAFAKTFMKKY----GIPTARYE--VFTDFEKAKEYV 133 (424)
T ss_dssp --EEE---CSHHHH-HTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHT----TCCBCCEE--EESCHHHHHHHH
T ss_pred --EEE---CCCHHH-HHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHC----CCCCCCCC--CCCCHHHHHHHH
T ss_conf --998---984788-888999998679831384899999986889999999984----98963444--556199999999
Q ss_pred HHHCCCCCCCC
Q ss_conf 97089675665
Q gi|254780234|r 163 EKHAIPIDKNK 173 (404)
Q Consensus 163 ~~~gIpv~~~~ 173 (404)
++.|.|+-..+
T Consensus 134 ~~~g~P~VIKp 144 (424)
T 2yw2_A 134 EKVGAPIVVKA 144 (424)
T ss_dssp HHHCSSEEEEE
T ss_pred HHCCCCEEEEE
T ss_conf 86499789985
No 145
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=28.22 E-value=25 Score=13.99 Aligned_cols=104 Identities=16% Similarity=0.107 Sum_probs=59.7
Q ss_pred HHHHHHHCCC-EEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 9999871898-699999457871106899999997398079982008999998799997368654787420130124335
Q gi|254780234|r 22 LKWLQVEKGL-EVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANALYEGYYLLGTAIARPLI 100 (404)
Q Consensus 22 i~~L~~e~g~-eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~Yeg~Ypl~tslaRpli 100 (404)
...||++.|. +|+++++ | +.+.+..-++|+..||.+.+.+-..++ ...+.-++. +
T Consensus 46 Al~lke~~~g~~V~v~s~--G-~~~~~~~lr~alamGad~a~~i~~~~~--------------~~~~~d~~~-------t 101 (252)
T 1efp_B 46 AIRLKEKGQAEEIIAVSI--G-VKQAAETLRTALAMGADRAILVVAADD--------------VQQDIEPLA-------V 101 (252)
T ss_dssp HHHHHTTTSCSEEEEEEE--E-SGGGHHHHHHHHHHTCSEEEEEECCSS--------------TTCCCCHHH-------H
T ss_pred HHHHHHCCCCEEEEEEEE--C-CHHHHHHHHHHHHCCCCCEEEEEECCC--------------CCCCCCHHH-------H
T ss_conf 999754279809999996--6-378799999886237982699992453--------------466778999-------9
Q ss_pred HHHHHHHHHHCCCCEEECHH--HCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC
Q ss_conf 99999998856892875001--11682156799999985879707744100687
Q gi|254780234|r 101 AKYLVDIANETGADAIAHGS--TGKGNDQVRFELSAYSLNSDIEIIAPWRHWSF 152 (404)
Q Consensus 101 a~~lv~~a~~~ga~~iaHG~--TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~ 152 (404)
++.+..+.++.+.|.|--|. +--..-|+=--++-..= +..++...+.++
T Consensus 102 a~~la~~~~~~~~DLIl~G~~s~D~~~g~vg~~lAe~Lg---~P~vt~v~~ie~ 152 (252)
T 1efp_B 102 AKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILG---WAQATFASKVEI 152 (252)
T ss_dssp HHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHT---CEEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCC---CCCEEEEEEEEE
T ss_conf 999999987419999999832566788842168897628---981357899998
No 146
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis str} PDB: 3dg6_A* 3dg7_A*
Probab=27.80 E-value=25 Score=13.94 Aligned_cols=37 Identities=8% Similarity=0.076 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 156799999985879707744100687637999999997
Q gi|254780234|r 126 DQVRFELSAYSLNSDIEIIAPWRHWSFKGRQDLIDFAEK 164 (404)
Q Consensus 126 DQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ya~~ 164 (404)
|.-|+...-.+++|++.+....- ..+ +.++.+.++++
T Consensus 171 d~~~i~~~r~~~g~~~~l~~Dan-~~~-~~~~A~~~~~~ 207 (367)
T 3dg3_A 171 DTAVVRALRERFGDAIELYVDGN-RGW-SAAESLRAMRE 207 (367)
T ss_dssp HHHHHHHHHHHHGGGSEEEEECT-TCS-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCEEEECCC-CCC-CHHHHHHHHHH
T ss_conf 99999999986398547974576-565-78999999997
No 147
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* 1a27_A*
Probab=27.55 E-value=25 Score=13.91 Aligned_cols=62 Identities=23% Similarity=0.257 Sum_probs=39.0
Q ss_pred CEEEE--EECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHC----CCEEEEEECHHHH
Q ss_conf 78999--9147725999999998718986999994578711068999999973----9807998200899
Q gi|254780234|r 6 KKVVL--AYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLL----GAKEVYVKDLRRE 69 (404)
Q Consensus 6 kkVvl--aySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~----Ga~~~~v~D~r~e 69 (404)
||||| .-|.|+--.++..++ +.|+.|+.+....-..+..+.+.+.+..+ +-...+..|+.++
T Consensus 2 kKVvlITGassGIG~a~A~~la--~~Ga~v~~v~~~~r~~~~~~~l~e~~~~~~~~~~~~~~~~~Dv~d~ 69 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLA--SDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS 69 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHH--TCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHH--HCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH
T ss_conf 9889991488689999999999--8799768999862764656889999999751688589997447999
No 148
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=27.50 E-value=25 Score=13.90 Aligned_cols=120 Identities=13% Similarity=0.059 Sum_probs=66.4
Q ss_pred CCCCCCEEEEEECC--CHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHH--------
Q ss_conf 98777789999147--72599999999871898699999457871106899999997398079982008999--------
Q gi|254780234|r 1 MSRDVKKVVLAYSG--GLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREF-------- 70 (404)
Q Consensus 1 M~~~~kkVvlaySG--GLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef-------- 70 (404)
|.+.+|++=++.=| ..-.+.+.+.++...++++++++- .+.+.+++-+.+.|.... .-|.++-+
T Consensus 2 ~~~~~kpirvgiIG~G~~g~~~~~~~~~~~~~~~l~~i~d-----~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~~vD~v 75 (346)
T 3cea_A 2 MVTTRKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACA-----LDSNQLEWAKNELGVETT-YTNYKDMIDTENIDAI 75 (346)
T ss_dssp ---CCCCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEEC-----SCHHHHHHHHHTTCCSEE-ESCHHHHHTTSCCSEE
T ss_pred CCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEC-----CCHHHHHHHHHHCCCCCC-CCCHHHHHCCCCCCEE
T ss_conf 9889997669999884999999999985499968999987-----999999999998299851-5999999648998889
Q ss_pred --------HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHH
Q ss_conf --------99879999736865478742013012433599999998856892875001116821567
Q gi|254780234|r 71 --------VRDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVR 129 (404)
Q Consensus 71 --------~~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvR 129 (404)
-.+++..+++++.-.-=.-|++++ .--++.+++.+++.|.....-|-+.+-+..++
T Consensus 76 ~I~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~---~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~ 139 (346)
T 3cea_A 76 FIVAPTPFHPEMTIYAMNAGLNVFCEKPLGLD---FNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYR 139 (346)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSCCCSC---HHHHHHHHHHHHTCTTSCEECCCGGGTCHHHH
T ss_pred EEECHHHHHHHHHHHHHHCCCEEEEECCCCCC---CCCCHHHHHHHHHCCCEEEECCEEECCCHHHH
T ss_conf 99571765899999998649859885574222---12211567888752876654132301799999
No 149
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class member, structural genomics; 2.20A {Eubacterium ventriosum atcc 27560}
Probab=27.30 E-value=25 Score=13.88 Aligned_cols=46 Identities=11% Similarity=0.123 Sum_probs=28.9
Q ss_pred CCCEEEEEECCC--HHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCE
Q ss_conf 777899991477--25999999998718986999994578711068999999973980
Q gi|254780234|r 4 DVKKVVLAYSGG--LDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAK 59 (404)
Q Consensus 4 ~~kkVvlaySGG--LDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~ 59 (404)
.|||.+++.||. ---|.+...|.+..|+.++ | -+.+.+.+...|..
T Consensus 3 ~mk~~iI~I~g~~GsGKstiak~LA~~Lg~~~~----d------~d~i~~~~~~~~~~ 50 (201)
T 3fdi_A 3 AMKQIIIAIGREFGSGGHLVAKKLAEHYNIPLY----S------KELLDEVAKDGRYS 50 (201)
T ss_dssp ---CCEEEEEECTTSSHHHHHHHHHHHTTCCEE----C------HHHHHHTTCC----
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEE----C------CHHHHHHHHHCCCC
T ss_conf 887458986699999869999999999599188----9------68899999875999
No 150
>2c40_A Inosine-uridine preferring nucleoside hydrolase family protein; spine; 2.2A {Bacillus anthracis}
Probab=27.24 E-value=25 Score=13.87 Aligned_cols=38 Identities=24% Similarity=0.230 Sum_probs=33.1
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC
Q ss_conf 77899991477259999999987189869999945787
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ 42 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq 42 (404)
||||++=-=.|.|-.+++.++......+|.++|+--|.
T Consensus 1 MkkvIiDtD~g~DD~~AL~~al~~p~~~l~gIt~v~GN 38 (312)
T 2c40_A 1 MKKVYFNHDGGVDDLVSLFLLLQMDNVELTGVSVIPAD 38 (312)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTCTTEEEEEEEECSSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf 95899989998799999999987899889999990598
No 151
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold; HET: 1PE MES; 1.80A {Aquifex aeolicus VF5} PDB: 2p68_A*
Probab=27.21 E-value=25 Score=13.87 Aligned_cols=60 Identities=27% Similarity=0.286 Sum_probs=32.7
Q ss_pred CCEEEE--EECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHH-HHHCCC-EEEEEECHHHH
Q ss_conf 778999--914772599999999871898699999457871106899999-997398-07998200899
Q gi|254780234|r 5 VKKVVL--AYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDK-ARLLGA-KEVYVKDLRRE 69 (404)
Q Consensus 5 ~kkVvl--aySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~-A~~~Ga-~~~~v~D~r~e 69 (404)
+.|++| .=|+|+--.++..++ +.|+.|+...-+ .+.++...++ ....|. ...+..|+.++
T Consensus 6 ~gK~alVTGas~GIG~aia~~la--~~Ga~V~~~~r~---~~~l~~~~~~l~~~~g~~~~~~~~Dv~~~ 69 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLA--SAGSTVIITGTS---GERAKAVAEEIANKYGVKAHGVEMNLLSE 69 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH--HTTCEEEEEESS---HHHHHHHHHHHHHHHCCCEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH--HCCCEEEEEECC---HHHHHHHHHHHHHHHCCCEEEEECCCCCH
T ss_conf 99989993778789999999999--879989999798---89999999999886299389998678999
No 152
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.65A {Pyrococcus horikoshii OT3} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X*
Probab=26.83 E-value=26 Score=13.82 Aligned_cols=101 Identities=17% Similarity=0.177 Sum_probs=60.4
Q ss_pred EEEECC--CHHHHHHHHHHHHHCCCEEEEEEEECCC--C----CHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 999147--7259999999987189869999945787--1----1068999999973980799820089999987999973
Q gi|254780234|r 9 VLAYSG--GLDTSIILKWLQVEKGLEVIVFIADLGQ--G----EELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFR 80 (404)
Q Consensus 9 vlaySG--GLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~----~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ 80 (404)
|+.-|- +--.-.++.+|+ +.||+|+.+.-.-+. + .+++++. ...++.++=...+++.+.+..++.
T Consensus 27 VVGaS~~~~k~g~~v~~~L~-~~g~~V~pVnP~~~~i~G~~~y~sl~di~------~~vD~v~v~~p~~~v~~il~~~~~ 99 (144)
T 2d59_A 27 LVGASPKPERDANIVMKYLL-EHGYDVYPVNPKYEEVLGRKCYPSVLDIP------DKIEVVDLFVKPKLTMEYVEQAIK 99 (144)
T ss_dssp EETCCSCTTSHHHHHHHHHH-HTTCEEEEECTTCSEETTEECBSSGGGCS------SCCSEEEECSCHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCHHHHHHHHH-HCCCEEEEECCCCEEECCEECCCCHHHCC------CCCCEEEEECCHHHHHHHHHHHHH
T ss_conf 98636999972999999999-77997999898770677863356012037------887379997288888999999997
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCC
Q ss_conf 6865478742013012433599999998856892875001116
Q gi|254780234|r 81 ANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGK 123 (404)
Q Consensus 81 ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~Tgk 123 (404)
.++.. -|+.++.. .....+.|++.|..+|..-|...
T Consensus 100 ~g~k~---v~~~~g~~----~ee~~~~a~~~gi~~v~~~C~~v 135 (144)
T 2d59_A 100 KGAKV---VWFQYNTY----NREASKKADEAGLIIVANRCMMR 135 (144)
T ss_dssp HTCSE---EEECTTCC----CHHHHHHHHHTTCEEEESCCHHH
T ss_pred CCCCE---EEEECCCC----CHHHHHHHHHCCCEEECCCCHHH
T ss_conf 59999---99824644----99999999996995790362168
No 153
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=26.59 E-value=26 Score=13.79 Aligned_cols=54 Identities=15% Similarity=0.195 Sum_probs=31.1
Q ss_pred EEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH--HHHHHHHHHCCCCEEECHHHCCCCHHH
Q ss_conf 799820089999987999973686547874201301243359--999999885689287500111682156
Q gi|254780234|r 60 EVYVKDLRREFVRDFVFPMFRANALYEGYYLLGTAIARPLIA--KYLVDIANETGADAIAHGSTGKGNDQV 128 (404)
Q Consensus 60 ~~~v~D~r~ef~~~~i~~~I~ana~Yeg~Ypl~tslaRplia--~~lv~~a~~~ga~~iaHG~TgkGNDQv 128 (404)
-.+|+|.++.|+..+- ...+..+.++. ..+++.||+.|..++.--.....++.-
T Consensus 34 ALLVIDmQn~F~~~~~---------------~~~~~~~~li~ni~~L~~~ar~~gipVi~t~~~~~~~~~~ 89 (287)
T 2fq1_A 34 ALLIHDMQDYFVSFWG---------------ENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDED 89 (287)
T ss_dssp EEEEECCBHHHHTTSC---------------TTCHHHHHHHHHHHHHHHHHHHTTCCEEEEECCSCCCHHH
T ss_pred EEEEECCCCCCCCCCC---------------CCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCH
T ss_conf 8999878601028875---------------4475699999999999999998699189996168888400
No 154
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Porphyromonas gingivalis W83}
Probab=26.35 E-value=26 Score=13.76 Aligned_cols=25 Identities=20% Similarity=0.173 Sum_probs=18.7
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHH
Q ss_conf 98777789999147725999999998
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQ 26 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~ 26 (404)
|+++.=||.+.=.|.+-+.++ .+|.
T Consensus 4 ~~~~~MkI~IlGaGaiG~~~a-~~L~ 28 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYG-AMLA 28 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHH-HHHH
T ss_pred CCCCCCEEEEECCCHHHHHHH-HHHH
T ss_conf 789999899999689999999-9999
No 155
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica hm-1} PDB: 1z2o_X* 1z2p_X*
Probab=26.22 E-value=27 Score=13.75 Aligned_cols=63 Identities=11% Similarity=0.126 Sum_probs=43.9
Q ss_pred CCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC-CCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 689287500111682156799999985879707744100687-6379999999970896756656
Q gi|254780234|r 111 TGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSF-KGRQDLIDFAEKHAIPIDKNKR 174 (404)
Q Consensus 111 ~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~-~sRe~~i~ya~~~gIpv~~~~~ 174 (404)
...+.+-|.-+|.+--.-+++.++.. .|..-++.|..-.++ ..|...-..++++|||+|....
T Consensus 55 ~~~d~~~~~lh~~~~~~~~lq~y~~~-~~~~~v~d~~~~~~l~~~k~~~~~~l~~~~IpvP~~~~ 118 (324)
T 1z2n_X 55 EPNAIITKRTHPVGKMADEMRKYEKD-HPKVLFLESSAIHDMMSSREEINALLIKNNIPIPNSFS 118 (324)
T ss_dssp CCSEEEECCSCSSSHHHHHHHHHHHH-CTTSEEETCHHHHHHHTBHHHHHHHHHHTTCCCSCEEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHH-CCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 87419999067985333399999998-89988868599999999699999999977989899799
No 156
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp}
Probab=26.21 E-value=27 Score=13.74 Aligned_cols=61 Identities=23% Similarity=0.287 Sum_probs=36.7
Q ss_pred CCEE--EEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCE-EEEEECHHHH
Q ss_conf 7789--999147725999999998718986999994578711068999999973980-7998200899
Q gi|254780234|r 5 VKKV--VLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAK-EVYVKDLRRE 69 (404)
Q Consensus 5 ~kkV--vlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~-~~~v~D~r~e 69 (404)
|+|+ |..=|+|+--.++..++ +.|++|+... .-..+..+.+.+.....|.. ..+..|+.++
T Consensus 3 M~K~alITGas~GIG~aia~~la--~~Ga~V~i~~--~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~ 66 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLA--EEGYNVAVNY--AGSKEKAEAVVEEIKAKGVDSFAIQANVADA 66 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHH--HTTCEEEEEE--SSCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH--HCCCEEEEEE--CCCHHHHHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf 98789992688689999999999--8799899971--8998999999999995499689998138999
No 157
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=26.11 E-value=27 Score=13.73 Aligned_cols=58 Identities=22% Similarity=0.305 Sum_probs=32.2
Q ss_pred EEE--EECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCE-EEEEECHHHH
Q ss_conf 999--9147725999999998718986999994578711068999999973980-7998200899
Q gi|254780234|r 8 VVL--AYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAK-EVYVKDLRRE 69 (404)
Q Consensus 8 Vvl--aySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~-~~~v~D~r~e 69 (404)
|+| .=|+|+--.++..++ +.|+.|+... .-..+..+.+.+.....|.. ..+..|+.++
T Consensus 3 VvlITGas~GIG~aia~~la--~~Ga~V~i~~--~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~ 63 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLG--KAGCKVLVNY--ARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHH--HTTCEEEEEE--SSCHHHHHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred EEEEECCCCHHHHHHHHHHH--HCCCEEEEEE--CCCHHHHHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf 99992887589999999999--8799899981--8997999999999997499289998379999
No 158
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=25.83 E-value=27 Score=13.70 Aligned_cols=147 Identities=13% Similarity=0.161 Sum_probs=73.3
Q ss_pred CCCCCCEEEEEE-CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHH--HHHHHHCCCEEEEEECHHHHHHHHHHHH
Q ss_conf 987777899991-4772599999999871898699999457871106899--9999973980799820089999987999
Q gi|254780234|r 1 MSRDVKKVVLAY-SGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIA--SDKARLLGAKEVYVKDLRREFVRDFVFP 77 (404)
Q Consensus 1 M~~~~kkVvlay-SGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~--~~~A~~~Ga~~~~v~D~r~ef~~~~i~~ 77 (404)
|+++ +||++.= ||-+-+.+ +..|. +.|++|++++=+.-...+.... .+.-...|+ +.+..|+.+. +.+..
T Consensus 1 m~~k-~kILVtGatG~iG~~l-v~~Ll-~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~gv-~v~~~D~~d~---~~l~~ 73 (308)
T 1qyc_A 1 MGSR-SRILLIGATGYIGRHV-AKASL-DLGHPTFLLVRESTASSNSEKAQLLESFKASGA-NIVHGSIDDH---ASLVE 73 (308)
T ss_dssp -CCC-CCEEEESTTSTTHHHH-HHHHH-HTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTC-EEECCCTTCH---HHHHH
T ss_pred CCCC-CEEEEECCCCHHHHHH-HHHHH-HCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCC-EEEEEECCCH---HHHHH
T ss_conf 9899-9799989883899999-99999-788969999888865556777777776503895-8999646543---55688
Q ss_pred HHHC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHH
Q ss_conf 9736-865478742013012433599999998856892875001116821567999999858797077441006876379
Q gi|254780234|r 78 MFRA-NALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQ 156 (404)
Q Consensus 78 ~I~a-na~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe 156 (404)
+++. .+.+.- .+..-+-....+++.+++.|...+-+.++ .|++.- + .....|.+.. +..+.
T Consensus 74 a~~~~d~v~~~-----~~~~~~~~~~~l~~a~~~~g~~~~~~~s~-~~~~~~----------~-~~~~~~~~~~-~~~k~ 135 (308)
T 1qyc_A 74 AVKNVDVVIST-----VGSLQIESQVNIIKAIKEVGTVKRFFPSE-FGNDVD----------N-VHAVEPAKSV-FEVKA 135 (308)
T ss_dssp HHHTCSEEEEC-----CCGGGSGGGHHHHHHHHHHCCCSEEECSC-CSSCTT----------S-CCCCTTHHHH-HHHHH
T ss_pred HHHHCEEEEEC-----CCCCCCCCCCHHHHHHHHCCCEEEEEEEC-CCCCCC----------C-CCCCCCCHHH-HHHHH
T ss_conf 75204157632-----56532334206889999739659996421-455667----------6-6766641167-99999
Q ss_pred HHHHHHHHHCCCCCCC
Q ss_conf 9999999708967566
Q gi|254780234|r 157 DLIDFAEKHAIPIDKN 172 (404)
Q Consensus 157 ~~i~ya~~~gIpv~~~ 172 (404)
...+++++.|++...-
T Consensus 136 ~~e~~~~~~~l~~~~~ 151 (308)
T 1qyc_A 136 KVRRAIEAEGIPYTYV 151 (308)
T ss_dssp HHHHHHHHHTCCBEEE
T ss_pred HHHHHHHHHCCCEEEE
T ss_conf 9999999809956993
No 159
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center for structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=25.73 E-value=27 Score=13.68 Aligned_cols=116 Identities=15% Similarity=-0.012 Sum_probs=63.8
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHH----------
Q ss_conf 9877778999914772599999999871898699999457871106899999997398079982008999----------
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREF---------- 70 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef---------- 70 (404)
|++++ ||.+.=.|.--.+..++-++...+++|++++ |. +.+.+ +.+.+..+++ -|.++-+
T Consensus 4 M~~~i-rigiIG~G~~~~~~h~~~~~~~~~~~lvav~-d~----~~~~~---~~~~~~~~~~-~~~~~ll~~~~iD~V~i 73 (352)
T 3kux_A 4 MADKI-KVGLLGYGYASKTFHAPLIMGTPGLELAGVS-SS----DASKV---HADWPAIPVV-SDPQMLFNDPSIDLIVI 73 (352)
T ss_dssp TTCCE-EEEEECCSHHHHHTHHHHHHTSTTEEEEEEE-CS----CHHHH---HTTCSSCCEE-SCHHHHHHCSSCCEEEE
T ss_pred CCCCC-EEEEECCCHHHHHHHHHHHHCCCCEEEEEEE-CC----CHHHH---HHHCCCCCEE-CCHHHHHCCCCCCEEEE
T ss_conf 20076-3999958799999999998449983999998-98----99999---9746999768-98999956999998998
Q ss_pred ------HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHH
Q ss_conf ------998799997368654787420130124335999999988568928750011168215679
Q gi|254780234|r 71 ------VRDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRF 130 (404)
Q Consensus 71 ------~~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRF 130 (404)
--+++..+++++----=.-|++.. .--++.+++.+++.|..+.. |..-+-+..++.
T Consensus 74 ~tp~~~H~~~~~~al~~gkhv~~EKP~a~~---~~ea~~l~~~~~~~~~~~~v-~~~~r~~p~~~~ 135 (352)
T 3kux_A 74 PTPNDTHFPLAQSALAAGKHVVVDKPFTVT---LSQANALKEHADDAGLLLSV-FHNRRWDSDFLT 135 (352)
T ss_dssp CSCTTTHHHHHHHHHHTTCEEEECSSCCSC---HHHHHHHHHHHHHTTCCEEE-CCGGGGCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEECCCCCCCC---CCCCHHHHHHHHHCCCCCEE-EEEECHHHHHHH
T ss_conf 886888898899999859977226874222---23212456678763863001-110000036999
No 160
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S, lyase; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=25.64 E-value=27 Score=13.67 Aligned_cols=133 Identities=19% Similarity=0.153 Sum_probs=62.4
Q ss_pred CCCEEEEEECCCHHHH---HHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHH--------
Q ss_conf 7778999914772599---99999987189869999945787110689999999739807998200899999--------
Q gi|254780234|r 4 DVKKVVLAYSGGLDTS---IILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVR-------- 72 (404)
Q Consensus 4 ~~kkVvlaySGGLDTS---v~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~-------- 72 (404)
.++||+|+.||+.-.- -++..|+ + |++|.++.-.-.+. + +...+.. ....+++ |. ++|..
T Consensus 18 ~k~rIllgvtGsIAayK~~~lir~L~-~-~~~V~vv~T~~A~~--F--V~~~~l~-~~~~~~~-~~-d~~~~~~~~~~~~ 88 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIKFGNLCHCFT-E-WAEVRAVVTKSSLH--F--LDKLSLP-QEVTLYT-DE-DEWSSWNKIGDPV 88 (209)
T ss_dssp -CCEEEEEECSSGGGGGHHHHHHHHH-T-TSEEEEEECTGGGG--T--CCGGGSC-TTCEEEC-TT-HHHHHCSSTTSCC
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHH-C-CCEEEEEECHHHHH--H--HHHHHCC-EEEEEEC-CC-CCCCCCCCCCCCC
T ss_conf 99869999816999999999999986-1-78699997556998--8--6775304-2455531-34-3345655567853
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCC-EEEEEECC--
Q ss_conf 879999736865478742013012433599999998856892875001116821567999999858797-07744100--
Q gi|254780234|r 73 DFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDI-EIIAPWRH-- 149 (404)
Q Consensus 73 ~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l-~viaP~Rd-- 149 (404)
.++--+=+|.. +..+ |+.|..+-++| .|-.+|-+- ..+.++...- -+++|-..
T Consensus 89 ~Hi~La~~ADl-------~vVa---PATANtiaK~A------------~GiaD~llt--~~~lA~~~~kPvliaPaMn~~ 144 (209)
T 1mvl_A 89 LHIELRRWADV-------LVIA---PLSANTLGKIA------------GGLCDNLLT--CIIRAWDYTKPLFVAPAMNTL 144 (209)
T ss_dssp HHHHHHHHCSE-------EEEE---EECHHHHHHHH------------HTCCSSHHH--HHHHTCCTTSCEEEEECCCHH
T ss_pred CHHHHHHHCCE-------EEEC---CCCHHHHHHHH------------CCCCCCHHH--HHHHHHHCCCCEEEECCCCHH
T ss_conf 37777532487-------8874---57888999984------------677798789--999987058888994188989
Q ss_pred -CCCCCHHHHHHHHHHHCCCC
Q ss_conf -68763799999999708967
Q gi|254780234|r 150 -WSFKGRQDLIDFAEKHAIPI 169 (404)
Q Consensus 150 -~~~~sRe~~i~ya~~~gIpv 169 (404)
|.-.--++-++-+++.|+-+
T Consensus 145 Mw~np~tq~nl~~L~~~G~~v 165 (209)
T 1mvl_A 145 MWNNPFTERHLLSLDELGITL 165 (209)
T ss_dssp HHHSHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHHHHCCEEE
T ss_conf 986699999999997689099
No 161
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=25.07 E-value=28 Score=13.61 Aligned_cols=105 Identities=22% Similarity=0.223 Sum_probs=47.1
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEE-ECCCCCHHHHHHHHHHHCCCEEEEEECHHHH-HHHHHHHHH----
Q ss_conf 7789999147725999999998718986999994-5787110689999999739807998200899-999879999----
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIA-DLGQGEELKIASDKARLLGAKEVYVKDLRRE-FVRDFVFPM---- 78 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~-d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~e-f~~~~i~~~---- 78 (404)
||=+|..=||=+ -|.++..|. +.|++|+++.- ..+..+.+ .-++ +++..|+.+. .+...+...
T Consensus 1 MKIlITGatGfI-G~~lv~~L~-~~g~~V~~~d~~~~~~~~~~--------~~~~-~~~~~D~~d~~~~~~~~~~~~~~~ 69 (311)
T 2p5y_A 1 MRVLVTGGAGFI-GSHIVEDLL-ARGLEVAVLDNLATGKRENV--------PKGV-PFFRVDLRDKEGVERAFREFRPTH 69 (311)
T ss_dssp CEEEEETTTSHH-HHHHHHHHH-TTTCEEEEECCCSSCCGGGS--------CTTC-CEECCCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECCCCHH-HHHHHHHHH-HCCCEEEEEECCCCCCHHHH--------HCCC-CEEEEECCCHHHHHHHHHHCCCCE
T ss_conf 969998888879-999999999-78698999978886776451--------3379-679975358899999997368737
Q ss_pred HHCCCCCCCCCCCCCC------HHHHHHHHHHHHHHHHCCCCEEECHHH
Q ss_conf 7368654787420130------124335999999988568928750011
Q gi|254780234|r 79 FRANALYEGYYLLGTA------IARPLIAKYLVDIANETGADAIAHGST 121 (404)
Q Consensus 79 I~ana~Yeg~Ypl~ts------laRplia~~lv~~a~~~ga~~iaHG~T 121 (404)
+...+.. .....+.. -.--.....+++.+++.++.-+...++
T Consensus 70 ~~~~~~~-~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~~s 117 (311)
T 2p5y_A 70 VSHQAAQ-ASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp EEECCSC-CCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred EEEECCC-CCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 8740324-66416666989999968999999999999726754999960
No 162
>3kts_A Glycerol uptake operon antiterminator regulatory protein; structural genomics, PSI-2, protein structure initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=24.97 E-value=28 Score=13.59 Aligned_cols=74 Identities=26% Similarity=0.324 Sum_probs=30.4
Q ss_pred HHHHHHHHHCCCCEEECH--HHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 999999885689287500--111682156799999985879707744100687637999999997089675665678864
Q gi|254780234|r 102 KYLVDIANETGADAIAHG--STGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQDLIDFAEKHAIPIDKNKRGEAPF 179 (404)
Q Consensus 102 ~~lv~~a~~~ga~~iaHG--~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ya~~~gIpv~~~~~~~~~y 179 (404)
+.+++..++.|-.++-|= ..|=++|+.-+|.-.+...|+. ||+ +|...+.+|++.|+.. .++-|
T Consensus 44 ~~iv~~~k~~gK~vfVHiDLI~GL~~d~~av~fL~~~~~~dG-IIS--------Tk~~~I~~Ak~~Gl~t-----IqR~F 109 (192)
T 3kts_A 44 KALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDG-IIS--------TRGNAIMKAKQHKMLA-----IQRLF 109 (192)
T ss_dssp HHHHHHHHHTTCEEEEEGGGEETCCCSHHHHHHHHHTTCCSE-EEE--------SCHHHHHHHHHTTCEE-----EEEEE
T ss_pred HHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCE-EEE--------CCHHHHHHHHHCCCEE-----EEEEE
T ss_conf 999999998799899985316777888899999998428998-997--------8899999999779907-----97663
Q ss_pred CCCHHHHCCC
Q ss_conf 1572431154
Q gi|254780234|r 180 SIDTNLLHSS 189 (404)
Q Consensus 180 S~D~Nlwg~S 189 (404)
=+|..-|.++
T Consensus 110 liDS~al~~~ 119 (192)
T 3kts_A 110 MIDSSAYNKG 119 (192)
T ss_dssp CCSHHHHHHH
T ss_pred EEEHHHHHHH
T ss_conf 4427689999
No 163
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=24.95 E-value=28 Score=13.59 Aligned_cols=65 Identities=20% Similarity=0.293 Sum_probs=36.2
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCE-EEEEECHHHH
Q ss_conf 98777789999147725999999998718986999994578711068999999973980-7998200899
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAK-EVYVKDLRRE 69 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~-~~~v~D~r~e 69 (404)
|.+.+.=+|..=|+|+--.++..++ +.|+.|+... ....+.++.+.+.....|-. ..+..|+.++
T Consensus 1 ~L~gK~alITGas~GIG~aia~~la--~~Ga~V~i~~--~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~ 66 (246)
T 2uvd_A 1 MLKGKVALVTGASRGIGRAIAIDLA--KQGANVVVNY--AGNEQKANEVVDEIKKLGSDAIAVRADVANA 66 (246)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHH--HTTCEEEEEE--SSCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH--HCCCEEEEEE--CCCHHHHHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf 9897989992888689999999999--8799899981--8998999999999997099689998269999
No 164
>2k0m_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodospirillum rubrum atcc 11170}
Probab=24.60 E-value=28 Score=13.54 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=28.4
Q ss_pred CCEEEEECCEEC-CHHHHHHHHHHHHHHCCCCC
Q ss_conf 024787516231-89999999988864216374
Q gi|254780234|r 229 RGDPIAINGQVM-SPEVLLEQLNQYGRCNGIGR 260 (404)
Q Consensus 229 ~G~PVainG~~~-~~~~li~~LN~igg~~GvGr 260 (404)
+..||.|+|+.+ +..++...+..|--++.+|-
T Consensus 3 ~akPV~lG~~~F~s~~~~~~~~r~iL~~y~~g~ 35 (104)
T 2k0m_A 3 KAQPIEIAGHEFARKADALAFMKVMLNRYRPGD 35 (104)
T ss_dssp CCCCEEETTEEESSHHHHHHHHHHHHHHSCTTE
T ss_pred CCCCEEECCEECCCHHHHHHHHHHHHHHCCCCC
T ss_conf 888868899822899999999999998589969
No 165
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=23.95 E-value=29 Score=13.46 Aligned_cols=32 Identities=19% Similarity=0.246 Sum_probs=17.6
Q ss_pred HHHCCCCEEEEEECCCCCCCHH-HHHHHHHHHCCCC
Q ss_conf 9858797077441006876379-9999999708967
Q gi|254780234|r 135 YSLNSDIEIIAPWRHWSFKGRQ-DLIDFAEKHAIPI 169 (404)
Q Consensus 135 ~~l~P~l~viaP~Rd~~~~sRe-~~i~ya~~~gIpv 169 (404)
..+.++.+|+.-.+. .. |. ....+++++|+.+
T Consensus 50 ~~l~~d~~iv~yC~~-G~--rS~~aa~~L~~~Gf~v 82 (108)
T 3gk5_A 50 KILERDKKYAVICAH-GN--RSAAAVEFLSQLGLNI 82 (108)
T ss_dssp GGSCTTSCEEEECSS-SH--HHHHHHHHHHTTTCCE
T ss_pred EECCCCCCEEEECCC-CH--HHHHHHHHHHHCCCCE
T ss_conf 203877776788899-84--9999999999849988
No 166
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=23.67 E-value=29 Score=13.42 Aligned_cols=64 Identities=30% Similarity=0.441 Sum_probs=39.7
Q ss_pred CCCC-CCEE--EEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCE-EEEEECHHHH
Q ss_conf 9877-7789--999147725999999998718986999994578711068999999973980-7998200899
Q gi|254780234|r 1 MSRD-VKKV--VLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAK-EVYVKDLRRE 69 (404)
Q Consensus 1 M~~~-~kkV--vlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~-~~~v~D~r~e 69 (404)
|+++ ..|| |..=|+|+--.++..++ +.|+.|+.. |.. .+.++++.+.....|.. ..+..|+.++
T Consensus 1 Ms~~l~gKvalITGas~GIG~aia~~la--~~Ga~V~~~--~r~-~~~l~~~~~~l~~~g~~~~~~~~Dv~~~ 68 (262)
T 1zem_A 1 MSKKFNGKVCLVTGAGGNIGLATALRLA--EEGTAIALL--DMN-REALEKAEASVREKGVEARSYVCDVTSE 68 (262)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHH--HTTCEEEEE--ESC-HHHHHHHHHHHHTTTSCEEEEECCTTCH
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHH--HCCCEEEEE--ECC-HHHHHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf 9965283989993878789999999999--879989999--899-8999999999985299389998238999
No 167
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=23.63 E-value=29 Score=13.49 Aligned_cols=36 Identities=17% Similarity=0.073 Sum_probs=22.1
Q ss_pred CEEEEEECCCHHHHHHHHHH------H---HHCCCEEEEEEEECC
Q ss_conf 78999914772599999999------8---718986999994578
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWL------Q---VEKGLEVIVFIADLG 41 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L------~---~e~g~eVi~~~~d~G 41 (404)
|++||.|-=+.||++|-.-+ . ...+++|+++.+|.-
T Consensus 49 k~~Vl~f~P~~~T~vC~~e~~~~~~~~~~~~~~~~~vi~IS~D~~ 93 (224)
T 3keb_A 49 TPKLIVTLLSVDEDEHAGLLLLRETRRFLDSWPHLKLIVITVDSP 93 (224)
T ss_dssp CCEEEEECSCTTCSTTTSHHHHHHHHHHHTTCTTSEEEEEESSCH
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCH
T ss_conf 849999964789874048998899888787605936999867869
No 168
>2b34_A F35G2.2, MAR1 ribonuclease; isochorismatase family, structural genomics, PSI, protein structure initiative; 2.14A {Caenorhabditis elegans}
Probab=23.54 E-value=30 Score=13.40 Aligned_cols=41 Identities=22% Similarity=0.320 Sum_probs=25.1
Q ss_pred EEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH--HHHHHHHHHHCCCCEEEC
Q ss_conf 079982008999998799997368654787420130124335--999999988568928750
Q gi|254780234|r 59 KEVYVKDLRREFVRDFVFPMFRANALYEGYYLLGTAIARPLI--AKYLVDIANETGADAIAH 118 (404)
Q Consensus 59 ~~~~v~D~r~ef~~~~i~~~I~ana~Yeg~Ypl~tslaRpli--a~~lv~~a~~~ga~~iaH 118 (404)
+-.+++|+++.|.. ..++. ..++ ...+++.||..|..+|.-
T Consensus 15 tALlvID~Q~~f~~----------~~~~~---------~~~i~ni~~li~~ar~~~~pVi~~ 57 (199)
T 2b34_A 15 SALFVCDLQEKFAS----------NIKYF---------PEIITTSRRLIDAARILSIPTIVT 57 (199)
T ss_dssp EEEEEECCBGGGTT----------SSTTH---------HHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEEECCCCHHC----------CCCCH---------HHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 69999908210205----------45699---------999999999999999849988997
No 169
>1zh8_A Oxidoreductase; TM0312, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: MSE NAP; 2.50A {Thermotoga maritima MSB8} SCOP: c.2.1.3 d.81.1.5
Probab=23.50 E-value=30 Score=13.40 Aligned_cols=118 Identities=12% Similarity=0.103 Sum_probs=63.0
Q ss_pred CCCCCEEEEEECC--CHHHHHHHHHHHHHCC-CEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHH-------
Q ss_conf 8777789999147--7259999999987189-86999994578711068999999973980799820089999-------
Q gi|254780234|r 2 SRDVKKVVLAYSG--GLDTSIILKWLQVEKG-LEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFV------- 71 (404)
Q Consensus 2 ~~~~kkVvlaySG--GLDTSv~i~~L~~e~g-~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~------- 71 (404)
|+.|||+=+|.=| .--....++.|+...+ ++|++++ |. +.+..++-+...|... ..-|+.+-+.
T Consensus 13 m~~mk~lrigiIG~G~~g~~~h~~~l~~~~~~~~l~ai~-d~----~~~~~~~~~~~~~~~~-~~~~~~ell~~~~iD~V 86 (340)
T 1zh8_A 13 MKPLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVT-SR----TRSHAEEFAKMVGNPA-VFDSYEELLESGLVDAV 86 (340)
T ss_dssp ---CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEE-CS----SHHHHHHHHHHHSSCE-EESCHHHHHHSSCCSEE
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEE-CC----CHHHHHHHHHHCCCCC-EECCHHHHHCCCCCCEE
T ss_conf 787668889999588999999999997289976999998-99----9999999999839983-53889999559999989
Q ss_pred ---------HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHH
Q ss_conf ---------9879999736865478742013012433599999998856892875001116821567
Q gi|254780234|r 72 ---------RDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVR 129 (404)
Q Consensus 72 ---------~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvR 129 (404)
.+.+..++.++-----.-|+++++ --++.+++.+++.|..+.. |-..+-+.+++
T Consensus 87 ~I~tp~~~H~~~~~~al~agk~Vl~EKP~~~~~---~e~~~l~~~a~~~~~~~~v-~~~~R~~p~~~ 149 (340)
T 1zh8_A 87 DLTLPVELNLPFIEKALRKGVHVICEKPISTDV---ETGKKVVELSEKSEKTVYI-AENFRHVPAFW 149 (340)
T ss_dssp EECCCGGGHHHHHHHHHHTTCEEEEESSSSSSH---HHHHHHHHHHHHCSSCEEE-ECGGGGCHHHH
T ss_pred EECCCCHHHHHHHHHHHHCCCCEEEECCCCCCC---CHHHHHHHHHHHHCCCCCC-CCCEECCCHHH
T ss_conf 913870345789999986699657636741321---1134666677651334322-22130383478
No 170
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=23.44 E-value=30 Score=13.39 Aligned_cols=62 Identities=24% Similarity=0.322 Sum_probs=42.4
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHH-CCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf 9877778999914772599999999871-898699999457871106899999997398079982008
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVE-KGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLR 67 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e-~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r 67 (404)
|++.++=++|.-+|-.-|+.+ .-++.. ..++|+++++ ..+++.+.+.+.+....-+++.|-+
T Consensus 1 M~~~K~I~IlGsTGSIG~~tL-~Vi~~~~d~f~v~~Lsa----~~n~~~L~~q~~~f~p~~v~i~d~~ 63 (388)
T 1r0k_A 1 MSQPRTVTVLGATGSIGHSTL-DLIERNLDRYQVIALTA----NRNVKDLADAAKRTNAKRAVIADPS 63 (388)
T ss_dssp -CCCEEEEEETTTSHHHHHHH-HHHHHTGGGEEEEEEEE----SSCHHHHHHHHHHTTCSEEEESCGG
T ss_pred CCCCCEEEEECCCCHHHHHHH-HHHHHCCCCCEEEEEEE----CCCHHHHHHHHHHHCCCEEEECCHH
T ss_conf 999888999885869899999-99982958708999995----8989999999999699999994899
No 171
>3b50_A Sialic acid-binding periplasmic protein SIAP; periplasmic binding protein, trap, sugar transport, transport, transport protein; HET: SLB; 1.40A {Haemophilus influenzae} PDB: 2v4c_A* 2cey_A 2cex_A
Probab=23.37 E-value=30 Score=13.38 Aligned_cols=21 Identities=19% Similarity=0.457 Sum_probs=11.0
Q ss_pred HHHH-HHHHHCCCCEEECHHHC
Q ss_conf 9999-99885689287500111
Q gi|254780234|r 102 KYLV-DIANETGADAIAHGSTG 122 (404)
Q Consensus 102 ~~lv-~~a~~~ga~~iaHG~Tg 122 (404)
+.+. +...+.|...++....|
T Consensus 104 ~~~~~~~~~~~~v~~l~~~~~g 125 (310)
T 3b50_A 104 KDLIKKMDKDLGVTLLSQAYNG 125 (310)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEE
T ss_pred HHHHHHHHHHCCEEEEEECCCC
T ss_conf 9999999875693687631576
No 172
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3itd_A
Probab=23.25 E-value=30 Score=13.37 Aligned_cols=60 Identities=20% Similarity=0.292 Sum_probs=35.9
Q ss_pred CEEEE--EECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCC-EEEEEECHHHH
Q ss_conf 78999--914772599999999871898699999457871106899999997398-07998200899
Q gi|254780234|r 6 KKVVL--AYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGA-KEVYVKDLRRE 69 (404)
Q Consensus 6 kkVvl--aySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga-~~~~v~D~r~e 69 (404)
.||+| .=|+|+-..++..++ +.|+.|+.... -..++.+.+.+.....|. ...+..|+.++
T Consensus 18 gK~alITGas~GIG~aia~~la--~~Ga~V~i~~~--~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~ 80 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLG--RLGAKVVVNYA--NSTKDAEKVVSEIKALGSDAIAIKADIRQV 80 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHH--HTTCEEEEEES--SCHHHHHHHHHHHHHTTCCEEEEECCTTSH
T ss_pred CCEEEEECCCCHHHHHHHHHHH--HCCCEEEEEEC--CCHHHHHHHHHHHHHHCCCEEEEECCCCCH
T ss_conf 8889992898589999999999--87998999838--976799999999996099789998479999
No 173
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=23.20 E-value=30 Score=13.36 Aligned_cols=17 Identities=18% Similarity=0.317 Sum_probs=8.3
Q ss_pred CCCCHHHHHHHHHHHCC
Q ss_conf 87637999999997089
Q gi|254780234|r 151 SFKGRQDLIDFAEKHAI 167 (404)
Q Consensus 151 ~~~sRe~~i~ya~~~gI 167 (404)
+..+|.+..-|+.++||
T Consensus 198 ~v~~r~e~~~~a~~~~l 214 (215)
T 1a04_A 198 KLKSRVEAAVWVHQERI 214 (215)
T ss_dssp TCCSHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHCCC
T ss_conf 99988999999998489
No 174
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=23.01 E-value=30 Score=13.33 Aligned_cols=120 Identities=14% Similarity=0.089 Sum_probs=61.0
Q ss_pred CCCEEEEEECC--CHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCE---------------------E
Q ss_conf 77789999147--725999999998718986999994578711068999999973980---------------------7
Q gi|254780234|r 4 DVKKVVLAYSG--GLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAK---------------------E 60 (404)
Q Consensus 4 ~~kkVvlaySG--GLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~---------------------~ 60 (404)
++|||=+|.=| +.-.. -+.-++...+.+|++++ |.- ++-++..++.+.+.|.. +
T Consensus 17 ~~kkiri~iiG~G~~g~~-h~~~~~~~~~~~~vav~-D~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD 93 (444)
T 2ixa_A 17 NPKKVRIAFIAVGLRGQT-HVENMARRDDVEIVAFA-DPD-PYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNID 93 (444)
T ss_dssp --CCEEEEEECCSHHHHH-HHHHHHTCTTEEEEEEE-CSC-HHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCC
T ss_pred CCCCCEEEEECCHHHHHH-HHHHHHCCCCCEEEEEE-CCC-HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCC
T ss_conf 999758999948199999-99999708994899997-698-889999999999828963000265436699996389998
Q ss_pred EEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHH
Q ss_conf 9982008999998799997368654787420130124335999999988568928750011168215679
Q gi|254780234|r 61 VYVKDLRREFVRDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRF 130 (404)
Q Consensus 61 ~~v~D~r~ef~~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRF 130 (404)
.+++=.-..+--+++..+++++----=.=|++++++ -++.+++.+++.|..... |.+-+-+..++.
T Consensus 94 ~V~I~tp~~~H~~~~~~al~~g~~v~~EKP~~~~~~---e~~~l~~~~~~~~~~~~v-~~~~r~~~~~~~ 159 (444)
T 2ixa_A 94 AVFVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITLE---ECWDYVKVSEQTGVPLMA-LENVCYRRDVMA 159 (444)
T ss_dssp EEEECCCGGGHHHHHHHHHHTTCEEEECCCCCSSHH---HHHHHHHHHHHHCCCEEE-CCGGGGCHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCHH---HHHHHHHHHHHHCCCCEE-CCCCCCCHHHHH
T ss_conf 899858827689999999971987774188989999---999999999983999601-104445879999
No 175
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A, structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii OT3}
Probab=22.85 E-value=30 Score=13.31 Aligned_cols=120 Identities=21% Similarity=0.164 Sum_probs=59.2
Q ss_pred CCEEEEEECCCHHHHHHHHHHH---HHCCCEEEEEEE-ECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHH-------
Q ss_conf 7789999147725999999998---718986999994-57871106899999997398079982008999998-------
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQ---VEKGLEVIVFIA-DLGQGEELKIASDKARLLGAKEVYVKDLRREFVRD------- 73 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~---~e~g~eVi~~~~-d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~------- 73 (404)
.|||++|..|.--+.-++.|.. ...+.+++.+++ |............ ...........+.++++.++
T Consensus 5 ~k~ILv~vD~S~~s~~a~~~a~~la~~~~a~l~llhVi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (170)
T 2dum_A 5 FRKVLFPTDFSEGAYRAVEVFEKRNKMEVGEVILLHVIDEGTLEELMDGYS--FFYDNAEIELKDIKEKLKEEASRKLQE 82 (170)
T ss_dssp CSEEEEECCSSHHHHHHHHHHHHHCCSCCSEEEEEEEEETTGGGCCC--------------CCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 597999974998999999999999876399799999963753233345433--345410233799999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHH
Q ss_conf 799997368654787420130124335999999988568928750011168215679
Q gi|254780234|r 74 FVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRF 130 (404)
Q Consensus 74 ~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRF 130 (404)
.+...... +.+ ....+.+..--.++.+++.+++.+||.|.=|+.|++.-+-.|
T Consensus 83 ~~~~~~~~---~~~-~~v~~~i~~G~~~~~I~~~a~~~~~DliVmG~~g~~~~~~~l 135 (170)
T 2dum_A 83 KAEEVKRA---FRA-KNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGKLSLSHEF 135 (170)
T ss_dssp HHHHHHHH---TTC-SEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCCCCC--TTC
T ss_pred HHHHHHHH---CCC-CCEEEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCE
T ss_conf 99988875---799-757999982667885201202565678998058999664450
No 176
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate synthetase; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 kdops; 1.75A {Neisseria meningitidis serogroup B} PDB: 3fyo_A* 3fyp_A* 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=22.64 E-value=31 Score=13.28 Aligned_cols=16 Identities=19% Similarity=0.183 Sum_probs=8.4
Q ss_pred HHHHHHHHHCCCCCCC
Q ss_conf 9999999708967566
Q gi|254780234|r 157 DLIDFAEKHAIPIDKN 172 (404)
Q Consensus 157 ~~i~ya~~~gIpv~~~ 172 (404)
..+.++.+.+.|+-.+
T Consensus 120 ~ll~~~~~~~~pv~l~ 135 (280)
T 2qkf_A 120 DLVVAMAKTGNVVNIK 135 (280)
T ss_dssp HHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHCCCCEEEC
T ss_conf 8999988516743532
No 177
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=22.62 E-value=31 Score=13.28 Aligned_cols=116 Identities=11% Similarity=-0.017 Sum_probs=59.6
Q ss_pred CCCCCCE--EEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHH----------
Q ss_conf 9877778--9999147725999999998718986999994578711068999999973980799820089----------
Q gi|254780234|r 1 MSRDVKK--VVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRR---------- 68 (404)
Q Consensus 1 M~~~~kk--VvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~---------- 68 (404)
||...|+ |.+.=.|+.-....++.|+...+.+|++++ |.- .+.+++. ++..++ .-|+++
T Consensus 1 ~~~~~~~irvgiIG~G~~g~~~~~~~l~~~~~~~lvav~-d~~----~~~~~~~---~~~~~~-~~~~~ell~~~~iD~V 71 (364)
T 3e82_A 1 MSLSNNTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVA-SRD----EEKVKRD---LPDVTV-IASPEAAVQHPDVDLV 71 (364)
T ss_dssp ------CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEE-CSC----HHHHHHH---CTTSEE-ESCHHHHHTCTTCSEE
T ss_pred CCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEE-CCC----HHHHHHH---CCCCCE-ECCHHHHHCCCCCCEE
T ss_conf 987899885999948199999999999719895899998-898----9999964---779975-7999999559999989
Q ss_pred ------HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHH
Q ss_conf ------9999879999736865478742013012433599999998856892875001116821567
Q gi|254780234|r 69 ------EFVRDFVFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVR 129 (404)
Q Consensus 69 ------ef~~~~i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvR 129 (404)
.+-.+++..+++++----=.-|+++. .--++.+++.+++.|..... |.+.+=+..++
T Consensus 72 ~I~tp~~~H~~~~~~al~~gkhV~~EKPla~~---~~e~~~l~~~a~~~g~~~~v-~~~~r~~p~~~ 134 (364)
T 3e82_A 72 VIASPNATHAPLARLALNAGKHVVVDKPFTLD---MQEARELIALAEEKQRLLSV-FHNRRWDSDYL 134 (364)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSCSCSS---HHHHHHHHHHHHHTTCCEEE-CCCCTTCHHHH
T ss_pred EECCCHHHHHHHHHHHHHCCCCCHHCCCCCCC---HHHHHHHHHHHHHCCEEEEE-EECCCCCHHHH
T ss_conf 98287788678888998649954102874110---34778999997514618998-61244686899
No 178
>2zzv_A ABC transporter, solute-binding protein; periplasmic substrate binding protein, calcium, lactate, trap transporter, transport protein; 1.40A {Thermus thermophilus} PDB: 2zzw_A 2zzx_A
Probab=22.58 E-value=31 Score=13.28 Aligned_cols=44 Identities=7% Similarity=0.030 Sum_probs=19.6
Q ss_pred HHHHHCCHHHHH-HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 986508999999-99999999999875351469899999999999
Q gi|254780234|r 292 IESISLDSGSAH-LKDDLMSRYASIVYQGFWFSPEREMLQALIDK 335 (404)
Q Consensus 292 LE~~~l~~~~~~-~K~~~~~~~a~lvy~G~wf~p~~~~l~a~i~~ 335 (404)
++-..++.+++. |++....-|.+..-.+-.+...-+.+.++++.
T Consensus 303 ~~i~~~s~~e~~~~~~~~~~v~~~~a~~~~~~~~v~~~~~~~~~~ 347 (361)
T 2zzv_A 303 VEVIRLSNEDVRKFRRLAIPIWFKWAKMDKYSREAFASQLEYMKG 347 (361)
T ss_dssp CEEEECCHHHHHHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHH
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 999989999999999999999999985197599999999999987
No 179
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling, bifunctional enzyme; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=22.44 E-value=31 Score=13.26 Aligned_cols=19 Identities=11% Similarity=0.113 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHCCCCCCCC
Q ss_conf 7999999997089675665
Q gi|254780234|r 155 RQDLIDFAEKHAIPIDKNK 173 (404)
Q Consensus 155 Re~~i~ya~~~gIpv~~~~ 173 (404)
-.+.+++++++|+.+....
T Consensus 122 ~~~~~~~a~~~g~~v~~~~ 140 (345)
T 1nvm_A 122 SKQHIEYARNLGMDTVGFL 140 (345)
T ss_dssp GHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHCCCCCEEE
T ss_conf 8899999998266300022
No 180
>2eyq_A TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli} SCOP: b.34.18.1 c.37.1.19 c.37.1.19 c.37.1.19 c.37.1.19 d.315.1.1
Probab=22.43 E-value=31 Score=13.26 Aligned_cols=13 Identities=15% Similarity=0.128 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHCC
Q ss_conf 7999999997089
Q gi|254780234|r 155 RQDLIDFAEKHAI 167 (404)
Q Consensus 155 Re~~i~ya~~~gI 167 (404)
+++.++.+.+.|.
T Consensus 141 ~~~L~~~Lv~~GY 153 (1151)
T 2eyq_A 141 RDALRTQLDSAGY 153 (1151)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999998599
No 181
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=22.35 E-value=31 Score=13.24 Aligned_cols=62 Identities=11% Similarity=0.167 Sum_probs=37.8
Q ss_pred CCCCEEEE--EECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHH
Q ss_conf 77778999--91477259999999987189869999945787110689999999739807998200899
Q gi|254780234|r 3 RDVKKVVL--AYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRRE 69 (404)
Q Consensus 3 ~~~kkVvl--aySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~e 69 (404)
+.|+|.|| .=|+|+--.++..++ ++|+.|+...-| .+.++.+.+.....+-...+..|+.++
T Consensus 18 ~~M~kTvLVTGas~GIG~aiA~~la--~~Ga~Vvl~~r~---~e~l~~~~~el~~~~~~~~~~~dv~~~ 81 (272)
T 2nwq_A 18 SHMSSTLFITGATSGFGEACARRFA--EAGWSLVLTGRR---EERLQALAGELSAKTRVLPLTLDVRDR 81 (272)
T ss_dssp ---CCEEEESSTTTSSHHHHHHHHH--HTTCEEEEEESC---HHHHHHHHHHHTTTSCEEEEECCTTCH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH--HCCCEEEEEECC---HHHHHHHHHHHHCCCCEEEEEEECCCH
T ss_conf 9999949998758799999999999--879989999899---999999999850478779999512227
No 182
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=22.08 E-value=32 Score=13.21 Aligned_cols=34 Identities=26% Similarity=0.252 Sum_probs=22.5
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 98777789999147725999999998718986999994
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIA 38 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~ 38 (404)
|+ |+||++.=+ |.=-+.++..|. +.|++|++++-
T Consensus 1 M~--m~kiLItGa-G~iG~~l~~~L~-~~g~~V~~~~R 34 (286)
T 3gpi_A 1 MS--LSKILIAGC-GDLGLELARRLT-AQGHEVTGLRR 34 (286)
T ss_dssp -C--CCCEEEECC-SHHHHHHHHHHH-HTTCCEEEEEC
T ss_pred CC--CCEEEEECC-CHHHHHHHHHHH-HCCCEEEEEEC
T ss_conf 99--787999894-599999999999-78598999978
No 183
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=21.99 E-value=32 Score=13.20 Aligned_cols=40 Identities=15% Similarity=0.131 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCC
Q ss_conf 5999999988568928750011168215679999998587
Q gi|254780234|r 100 IAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNS 139 (404)
Q Consensus 100 ia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P 139 (404)
.++.+.+.....+.-++..|..+..+.+.|.+....++..
T Consensus 112 aa~~l~~~~~~~~~~~i~~g~~~~~~~~~R~~g~~~~l~~ 151 (313)
T 2h3h_A 112 AGLIMKELLGGKGKVVIGTGSLTAMNSLQRIQGFKDAIKD 151 (313)
T ss_dssp HHHHHHHHHTSCSEEEEEESCSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 9999998548776400035887876699999999998613
No 184
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=21.98 E-value=31 Score=13.27 Aligned_cols=41 Identities=12% Similarity=0.191 Sum_probs=22.9
Q ss_pred HHHHHHHHCCCCEEEEEECC-------------CCCCCHHHHHHHHHHHCCCCC
Q ss_conf 99999985879707744100-------------687637999999997089675
Q gi|254780234|r 130 FELSAYSLNSDIEIIAPWRH-------------WSFKGRQDLIDFAEKHAIPID 170 (404)
Q Consensus 130 Fe~~~~~l~P~l~viaP~Rd-------------~~~~sRe~~i~ya~~~gIpv~ 170 (404)
-+++-.+=-+...||+.+.+ ..+-.+++..+||++||+|+-
T Consensus 158 vdL~~lAGl~P~avicEil~d~g~~~~~~~~~~g~ma~~~~l~~fA~~~~lp~i 211 (233)
T 1k4i_A 158 VELCRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVC 211 (233)
T ss_dssp HHHHHHTTCCSBEEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEE
T ss_conf 999998099972899999408986454223343122453999999998399799
No 185
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=21.50 E-value=32 Score=13.13 Aligned_cols=114 Identities=14% Similarity=0.114 Sum_probs=53.7
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCC
Q ss_conf 78999914772599999999871898699999457871106899999997398079982008999998799997368654
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANALY 85 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~Y 85 (404)
|||.+-=+.|.--|.++..|. ++||+|+++.-+.- ......+++-...-. .+++..|+++...-.-++.........
T Consensus 15 k~vLITGatGfIGs~l~~~Ll-~~g~~V~~i~r~~~-~~~~~~l~~~~~~~~-~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 91 (335)
T 1rpn_A 15 RSALVTGITGQDGAYLAKLLL-EKGYRVHGLVARRS-SDTRWRLRELGIEGD-IQYEDGDMADACSVQRAVIKAQPQEVY 91 (335)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCCS-SCCCHHHHHTTCGGG-EEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCCC-CCCHHHHHHHCCCCC-CEEEEEECCCCHHHHHCCCCCCCCCCC
T ss_conf 549997588789999999999-78498999989997-651777987333689-489982156723210002233322222
Q ss_pred CCC--CCCCCCHHHHH--------HHHHHHHHHHHCCCC-EEECHHHC
Q ss_conf 787--42013012433--------599999998856892-87500111
Q gi|254780234|r 86 EGY--YLLGTAIARPL--------IAKYLVDIANETGAD-AIAHGSTG 122 (404)
Q Consensus 86 eg~--Ypl~tslaRpl--------ia~~lv~~a~~~ga~-~iaHG~Tg 122 (404)
-.. .........+. -...+++.|++.+.. .+.+.||.
T Consensus 92 ~~a~~~~~~~~~~~~~~~~~~Nv~gt~~~l~~a~~~~~~~~~i~~Ss~ 139 (335)
T 1rpn_A 92 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTS 139 (335)
T ss_dssp ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEG
T ss_pred CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 222222232223330002201125278999999981987342004575
No 186
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, structural genomics, NPPSFA; 1.85A {Aquifex aeolicus VF5}
Probab=21.46 E-value=32 Score=13.12 Aligned_cols=18 Identities=22% Similarity=0.137 Sum_probs=8.0
Q ss_pred CEEEEEECCCHHHHHHHH
Q ss_conf 789999147725999999
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILK 23 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~ 23 (404)
|++||.|--+.+|++|..
T Consensus 48 k~vvl~f~~~~~~p~C~~ 65 (171)
T 2yzh_A 48 VVQVIITVPSLDTPVCET 65 (171)
T ss_dssp SEEEEEECSCTTSHHHHH
T ss_pred CEEEEEEECCCCCCCCCC
T ss_conf 869999836767676754
No 187
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reductase family; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus HB8}
Probab=21.40 E-value=32 Score=13.11 Aligned_cols=163 Identities=18% Similarity=0.093 Sum_probs=75.6
Q ss_pred CCCCEEEE--EECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHH-HHHHHHHHH
Q ss_conf 77778999--914772599999999871898699999457871106899999997398079982008999-998799997
Q gi|254780234|r 3 RDVKKVVL--AYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREF-VRDFVFPMF 79 (404)
Q Consensus 3 ~~~kkVvl--aySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef-~~~~i~~~I 79 (404)
+.||++|| .=|+|+--.++..++ +.|+.|+...-| .+.+++-+..++....+..|+.++= +++.+..+.
T Consensus 2 ~~mk~~VlITGas~GIG~a~a~~la--~~G~~V~~~~r~------~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~ 73 (234)
T 2ehd_A 2 EGMKGAVLITGASRGIGEATARLLH--AKGYRVGLMARD------EKRLQALAAELEGALPLPGDVREEGDWARAVAAME 73 (234)
T ss_dssp --CCCEEEESSTTSHHHHHHHHHHH--HTTCEEEEEESC------HHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH--HCCCEEEEEECC------HHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHH
T ss_conf 9999889997767499999999999--879999999899------99999999985686599656798999999999999
Q ss_pred H---------CCCCCCCCCCC-CCCHH------------HHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHH
Q ss_conf 3---------68654787420-13012------------43359999999885689287500111682156799999985
Q gi|254780234|r 80 R---------ANALYEGYYLL-GTAIA------------RPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSL 137 (404)
Q Consensus 80 ~---------ana~Yeg~Ypl-~tsla------------Rplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l 137 (404)
. .||-....-|+ ..+.. =..+.+..++.+++.+-..|-.=++..|-- -
T Consensus 74 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~m~~~~~G~IvnisS~~~~~----------~ 143 (234)
T 2ehd_A 74 EAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN----------P 143 (234)
T ss_dssp HHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS----------C
T ss_pred HHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCC----------C
T ss_conf 975999799989967989860109999999999999699999999999999984997899984687778----------8
Q ss_pred CCCCEEEEEEC--CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCC
Q ss_conf 87970774410--06876379999999970896756656788641572431154
Q gi|254780234|r 138 NSDIEIIAPWR--HWSFKGRQDLIDFAEKHAIPIDKNKRGEAPFSIDTNLLHSS 189 (404)
Q Consensus 138 ~P~l~viaP~R--d~~~~sRe~~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S 189 (404)
.|....|+.-. -..| +|.-..++ .++||-|..- .|--+|..+|...
T Consensus 144 ~~~~~~Y~asK~al~~l-t~~la~el-~~~gIrVn~I----~PG~v~T~~~~~~ 191 (234)
T 2ehd_A 144 FKGGAAYNASKFGLLGL-AGAAMLDL-REANVRVVNV----LPGSVDTGFAGNT 191 (234)
T ss_dssp CTTCHHHHHHHHHHHHH-HHHHHHHH-GGGTEEEEEE----ECC----------
T ss_pred CCCCHHHHHHHHHHHHH-HHHHHHHH-CCCCCEEEEE----ECCCCCCCCCCCC
T ss_conf 99984799999999999-99999984-8128599999----7188977000078
No 188
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=21.30 E-value=33 Score=13.10 Aligned_cols=110 Identities=20% Similarity=0.183 Sum_probs=56.5
Q ss_pred CCEEEEEE-CCCHHH-HHHHHHHHHHCCCEEEEEEEECCCCCHH-HHHHHHHHHC---CCEEEEEECHHHHHHHHHHHHH
Q ss_conf 77899991-477259-9999999871898699999457871106-8999999973---9807998200899999879999
Q gi|254780234|r 5 VKKVVLAY-SGGLDT-SIILKWLQVEKGLEVIVFIADLGQGEEL-KIASDKARLL---GAKEVYVKDLRREFVRDFVFPM 78 (404)
Q Consensus 5 ~kkVvlay-SGGLDT-Sv~i~~L~~e~g~eVi~~~~d~Gq~~d~-~~~~~~A~~~---Ga~~~~v~D~r~ef~~~~i~~~ 78 (404)
||||+++- ..|..- -.++.||+ +.|++|+-+-.+.....|+ +.+.+.|... -+..-+++... .+=-+
T Consensus 1 mkkI~igsDhaG~~lK~~l~~~L~-~~g~ev~D~G~~~~~~~DYpd~a~~~a~~v~~~~~~~GIliCGt------G~G~s 73 (149)
T 2vvr_A 1 MKKIAFGCDHVGFILKHEIVAHLV-ERGVEVIDKGTWSSERTDYPHYASQVALAVAGGEVDGGILICGT------GVGIS 73 (149)
T ss_dssp CCEEEEEECTTGGGGHHHHHHHHH-HTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESS------SHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHH-HCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCC------CCHHH
T ss_conf 987999758707999999999999-87998997899835577840789999998605775425895589------84699
Q ss_pred HHCCCCCCCCC-CCCCCHHHHHHHHHHHHHHH-HCCCCEEECHHHCCCCHHHH
Q ss_conf 73686547874-20130124335999999988-56892875001116821567
Q gi|254780234|r 79 FRANALYEGYY-LLGTAIARPLIAKYLVDIAN-ETGADAIAHGSTGKGNDQVR 129 (404)
Q Consensus 79 I~ana~Yeg~Y-pl~tslaRplia~~lv~~a~-~~ga~~iaHG~TgkGNDQvR 129 (404)
|.||- +-|.+ -+... +. ..+.++ -.+|++++-|+---|.++..
T Consensus 74 iaANK-~~GIRAa~~~d---~~----~A~~ar~hNnaNVL~lGar~~~~~~a~ 118 (149)
T 2vvr_A 74 IAANK-FAGIRAVVCSE---PY----SAQLSRQNNDTNVLAFGSRVVGLELAK 118 (149)
T ss_dssp HHHHT-STTCCEEECSS---HH----HHHHHHHHHCCCEEEEETTTBCHHHHH
T ss_pred HHHHC-CCCEEEEECCC---CH----HHHHHHHHCCCCEEEECCCCCCHHHHH
T ss_conf 98726-79989972279---29----999999974970899767647999999
No 189
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=21.02 E-value=33 Score=13.06 Aligned_cols=60 Identities=20% Similarity=0.248 Sum_probs=31.8
Q ss_pred CCEEEE--EECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHH-HHCCC-EEEEEECHHHH
Q ss_conf 778999--9147725999999998718986999994578711068999999-97398-07998200899
Q gi|254780234|r 5 VKKVVL--AYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKA-RLLGA-KEVYVKDLRRE 69 (404)
Q Consensus 5 ~kkVvl--aySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A-~~~Ga-~~~~v~D~r~e 69 (404)
|+||+| .=|+|+--.++..++ +.|++|+... .- .+.+++..+.. ...|. ...+..|+.++
T Consensus 1 MnKvalVTGas~GIG~aia~~la--~~Ga~V~i~~--r~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 64 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFL--ARGDRVAALD--LS-AETLEETARTHWHAYADKVLRVRADVADE 64 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHH--HTTCEEEEEE--SC-HHHHHHHHHHHSTTTGGGEEEEECCTTCH
T ss_pred CCCEEEECCCCCHHHHHHHHHHH--HCCCEEEEEE--CC-HHHHHHHHHHHHHHCCCCEEEEEECCCCH
T ss_conf 99899991789789999999999--8799899998--98-88999999999985499489999407999
No 190
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=20.90 E-value=33 Score=13.04 Aligned_cols=105 Identities=17% Similarity=0.158 Sum_probs=53.2
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHH-CC
Q ss_conf 77789999147725999999998718986999994578711068999999973980799820089999987999973-68
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFR-AN 82 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~-an 82 (404)
.||-+|+.-||-+-++++ ..|. +.|++|+++.-+--..+.+ ...++ +++..|+.+. +.+..+++ +.
T Consensus 13 ~mkilVtGatG~vG~~l~-~~L~-~~g~~V~~l~R~~~~~~~l-------~~~~~-~~~~~Dl~d~---~~l~~~~~~~d 79 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAA-RAIR-AAGHDLVLIHRPSSQIQRL-------AYLEP-ECRVAEMLDH---AGLERALRGLD 79 (342)
T ss_dssp CCEEEEESTTSHHHHHHH-HHHH-HTTCEEEEEECTTSCGGGG-------GGGCC-EEEECCTTCH---HHHHHHTTTCS
T ss_pred CCEEEEECCCCHHHHHHH-HHHH-HCCCEEEEEECCCHHHHHH-------CCCCC-EEEEEECCCH---HHHHHHHHCCC
T ss_conf 994999899988999999-9999-7869899997881135450-------33797-7999408999---99999983898
Q ss_pred CCCC--CCCCCC-----CCHHH-HHHHHHHHHHHHHCCCCEEECHHH
Q ss_conf 6547--874201-----30124-335999999988568928750011
Q gi|254780234|r 83 ALYE--GYYLLG-----TAIAR-PLIAKYLVDIANETGADAIAHGST 121 (404)
Q Consensus 83 a~Ye--g~Ypl~-----tslaR-plia~~lv~~a~~~ga~~iaHG~T 121 (404)
+.+. +.+... ..+.. ....+.+++.|++.|+.-+-+-+|
T Consensus 80 ~Vih~Aa~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~i~~Ss 126 (342)
T 2x4g_A 80 GVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp EEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred EEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 99964444110011078999987889999999998659872352121
No 191
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=20.47 E-value=34 Score=12.98 Aligned_cols=98 Identities=17% Similarity=0.145 Sum_probs=52.7
Q ss_pred CCH--HHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHC-CCEEEEEECHH--HHHHHHHHHHHHHCCCCCCCC
Q ss_conf 772--5999999998718986999994578711068999999973-98079982008--999998799997368654787
Q gi|254780234|r 14 GGL--DTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLL-GAKEVYVKDLR--REFVRDFVFPMFRANALYEGY 88 (404)
Q Consensus 14 GGL--DTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~-Ga~~~~v~D~r--~ef~~~~i~~~I~ana~Yeg~ 88 (404)
|-| |++.-+.-...+-| +|+++++ | .+.+.+.+.+.++ |+.++++.|-- +.|..+....++. ....+-.
T Consensus 11 G~l~~~st~Ell~aAr~lg-dv~alv~--G--~~~~~~a~~l~~~~GadkV~~~d~~~l~~y~~e~~a~~l~-~~~~~~~ 84 (307)
T 1efp_A 11 GALNRDATAKAVAAVKALG-DVTVLCA--G--ASAKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALIV-GLAGDYS 84 (307)
T ss_dssp SCBCHHHHHHHHHHHGGGS-CEEEEEE--E--TTCHHHHHHHHTSTTEEEEEEEECGGGTTCCHHHHHHHHH-HHHTTCS
T ss_pred CEECHHHHHHHHHHHHHHC-CCEEEEE--C--CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHH-HHCCCCC
T ss_conf 9988889999999998409-8179998--8--9957999998635698789995672001244136899987-5303456
Q ss_pred C--CCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHC
Q ss_conf 4--201301243359999999885689287500111
Q gi|254780234|r 89 Y--LLGTAIARPLIAKYLVDIANETGADAIAHGSTG 122 (404)
Q Consensus 89 Y--pl~tslaRplia~~lv~~a~~~ga~~iaHG~Tg 122 (404)
+ .-+|+.+|-+ .-++|-++++..++. ||.
T Consensus 85 ~vL~~~T~~Grdl----aprlAarl~~gl~ad-~~~ 115 (307)
T 1efp_A 85 HIAAPATTDAKNV----MPRVAALLDVMVLSD-VSA 115 (307)
T ss_dssp EEEEESSHHHHHH----HHHHHHHTTCCEEEE-ESE
T ss_pred EEEEECCCCHHHH----HHHHHHHHCCCCCCC-CCE
T ss_conf 5998147421257----789999857885455-307
No 192
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=20.38 E-value=34 Score=12.97 Aligned_cols=55 Identities=24% Similarity=0.318 Sum_probs=31.6
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEC---CCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 778999914772599999999871898699999457---87110689999999739807998
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADL---GQGEELKIASDKARLLGAKEVYV 63 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~---Gq~~d~~~~~~~A~~~Ga~~~~v 63 (404)
||-|++++|. . +.-|+..|. +.|+||++|...- |...-...+++-|.+.|. +++.
T Consensus 1 Mkiv~~~~~~-~-~~~~l~~L~-~~~~~i~~V~t~~~~~~~~~~~~~v~~~a~~~~i-p~~~ 58 (305)
T 2bln_A 1 MKTVVFAYHD-M-GCLGIEALL-AAGYEISAIFTHTDNPGEKAFYGSVARLAAERGI-PVYA 58 (305)
T ss_dssp CEEEEEECHH-H-HHHHHHHHH-HTTCEEEEEECCCC------CCCCHHHHHHHHTC-CEEC
T ss_pred CEEEEECCCH-H-HHHHHHHHH-HCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCC-CEEC
T ss_conf 9599992778-9-999999999-7899889999089999887898989999998699-8984
No 193
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: NAP; 2.07A {Thermotoga maritima MSB8} SCOP: c.2.1.2
Probab=20.34 E-value=34 Score=12.96 Aligned_cols=57 Identities=25% Similarity=0.196 Sum_probs=31.9
Q ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHH-HHHHHCCCE-EEEEECHHHH
Q ss_conf 9999147725999999998718986999994578711068999-999973980-7998200899
Q gi|254780234|r 8 VVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIAS-DKARLLGAK-EVYVKDLRRE 69 (404)
Q Consensus 8 VvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~-~~A~~~Ga~-~~~v~D~r~e 69 (404)
+|..=|+|+--.++..++ +.|+.|+...- - .+++++.. +-....|.. ..+..|+.++
T Consensus 25 lITGas~GIG~aiA~~la--~~Ga~V~i~~r--~-~~~l~~~~~~l~~~~g~~~~~~~~Dv~~~ 83 (267)
T 1vl8_A 25 LVTGGSRGLGFGIAQGLA--EAGCSVVVASR--N-LEEASEAAQKLTEKYGVETMAFRCDVSNY 83 (267)
T ss_dssp EEETTTSHHHHHHHHHHH--HTTCEEEEEES--C-HHHHHHHHHHHHHHHCCCEEEEECCTTCH
T ss_pred EEECCCCHHHHHHHHHHH--HCCCEEEEEEC--C-HHHHHHHHHHHHHHHCCCEEEEEECCCCH
T ss_conf 994898789999999999--87998999979--8-89999999999997099579999348999
No 194
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=20.09 E-value=34 Score=12.93 Aligned_cols=60 Identities=13% Similarity=0.284 Sum_probs=33.5
Q ss_pred CEEEE--EECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCC-EEEEEECHHHH
Q ss_conf 78999--914772599999999871898699999457871106899999997398-07998200899
Q gi|254780234|r 6 KKVVL--AYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGA-KEVYVKDLRRE 69 (404)
Q Consensus 6 kkVvl--aySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga-~~~~v~D~r~e 69 (404)
.||+| .=|+|+--.++..++ +.|+.|+...- -+.+..+..++-....|. ...+..|+.++
T Consensus 14 gK~alVTGas~GIG~aia~~la--~~Ga~V~i~~r--~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~ 76 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVA--AAGANVAVIYR--SAADAVEVTEKVGKEFGVKTKAYQCDVSNT 76 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHH--HTTEEEEEEES--SCTTHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHH--HCCCEEEEEEC--CHHHHHHHHHHHHHHCCCCEEEEEECCCCH
T ss_conf 9979992888789999999999--87998999979--778899999999997099579999018999
No 195
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, PSI-2; 2.30A {Staphylococcus aureus subsp}
Probab=20.06 E-value=35 Score=12.92 Aligned_cols=32 Identities=25% Similarity=0.169 Sum_probs=22.6
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 9877778999914772599999999871898699999
Q gi|254780234|r 1 MSRDVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFI 37 (404)
Q Consensus 1 M~~~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~ 37 (404)
|+. ||.+.=.|.+-|-++ ..|. +.|++|..+.
T Consensus 1 m~M---kI~IiGaGaiG~~~a-~~L~-~~G~~Vtl~~ 32 (294)
T 3g17_A 1 MSL---SVAIIGPGAVGTTIA-YELQ-QSLPHTTLIG 32 (294)
T ss_dssp --C---CEEEECCSHHHHHHH-HHHH-HHCTTCEEEE
T ss_pred CCC---EEEEECCCHHHHHHH-HHHH-HCCCCEEEEE
T ss_conf 999---899999689999999-9999-5599279997
No 196
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, structural genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli K12}
Probab=20.02 E-value=35 Score=12.92 Aligned_cols=129 Identities=16% Similarity=0.099 Sum_probs=59.2
Q ss_pred CEEEEEECCC-HH----HHH---HHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEC--H-HHHHHHHH
Q ss_conf 7899991477-25----999---999998718986999994578711068999999973980799820--0-89999987
Q gi|254780234|r 6 KKVVLAYSGG-LD----TSI---ILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKD--L-RREFVRDF 74 (404)
Q Consensus 6 kkVvlaySGG-LD----TSv---~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D--~-r~ef~~~~ 74 (404)
+.|.+.++.- +. +.+ +-..+ .+.||+++-+..+- .+++....-+.....++.-.++.- . .+++. +.
T Consensus 20 ~~Igvi~~~~~~~~~f~~~l~~gi~~~~-~~~g~~l~l~~~~~-~~~~~~~~l~~~~~~~~dgiIi~~~~~~~~~~~-~~ 96 (296)
T 3brq_A 20 QTLGLVVTNTLYHGIYFSELLFHAARMA-EEKGRQLLLADGKH-SAEEERQAIQYLLDLRCDAIMIYPRFLSVDEID-DI 96 (296)
T ss_dssp CEEEEEECGGGCC--CHHHHHHHHHHHH-HHTTCEEEEECCTT-SHHHHHHHHHHHHHTTCSEEEEECSSSCHHHHH-HH
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHH-HHCCCEEEEEECCC-CHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH-HH
T ss_conf 9799995886646869999999999999-98599999996899-979999999999970987377526667758999-99
Q ss_pred HH----HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE--CHHHCCCCHHHHHHHHHHHH
Q ss_conf 99----99736865478742013012433599999998856892875--00111682156799999985
Q gi|254780234|r 75 VF----PMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIA--HGSTGKGNDQVRFELSAYSL 137 (404)
Q Consensus 75 i~----~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~ia--HG~TgkGNDQvRFe~~~~~l 137 (404)
+. |.+..+....+...........-.+..++....+.|..-++ .|..+..+.+-|++....++
T Consensus 97 ~~~~~ipvV~~~~~~~~~~~~~v~~d~~~~~~~~~~~l~~~G~~~i~~i~~~~~~~~~~~r~~gf~~~~ 165 (296)
T 3brq_A 97 IDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDAL 165 (296)
T ss_dssp HHTCSSCEEEESCCCSSSGGGEECCCHHHHHHHHHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 996499889996124778898899673677888899987632450399946877750577888999999
Done!