RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780235|ref|YP_003064648.1| hypothetical protein CLIBASIA_00600 [Candidatus Liberibacter asiaticus str. psy62] (74 letters) >2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial virulence factor, transferase/DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D* (A:1-56,A:157-278) Length = 178 Score = 24.4 bits (53), Expect = 5.9 Identities = 11/35 (31%), Positives = 17/35 (48%) Query: 11 FCKAGTVFLSLKKDMYLGWDNNSMFILKQEFFIFM 45 F AG+VFL+ Y+ D N+ F + + M Sbjct: 35 FVGAGSVFLNTDFSRYILADINNAFFYCESYADSM 69 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.338 0.148 0.494 Gapped Lambda K H 0.267 0.0617 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 553,319 Number of extensions: 19176 Number of successful extensions: 54 Number of sequences better than 10.0: 1 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 2 Length of query: 74 Length of database: 4,956,049 Length adjustment: 40 Effective length of query: 34 Effective length of database: 3,603,849 Effective search space: 122530866 Effective search space used: 122530866 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.8 bits) S2: 50 (23.3 bits)