RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780235|ref|YP_003064648.1| hypothetical protein CLIBASIA_00600 [Candidatus Liberibacter asiaticus str. psy62] (74 letters) >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 Score = 25.8 bits (55), Expect = 1.0 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Query: 17 VFLSLKKDMYLGWDNNSMFILKQEFFIFMMEKLVCL----LLCVCGMLWFS 63 + L+ L NS++ + + FF + L LC C +L+F Sbjct: 167 LLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEILYFR 217 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.338 0.148 0.494 Gapped Lambda K H 0.267 0.0400 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 280,819 Number of extensions: 10062 Number of successful extensions: 21 Number of sequences better than 10.0: 1 Number of HSP's gapped: 20 Number of HSP's successfully gapped: 1 Length of query: 74 Length of database: 2,407,596 Length adjustment: 41 Effective length of query: 33 Effective length of database: 1,844,666 Effective search space: 60873978 Effective search space used: 60873978 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.8 bits) S2: 47 (22.7 bits)