RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780235|ref|YP_003064648.1| hypothetical protein
CLIBASIA_00600 [Candidatus Liberibacter asiaticus str. psy62]
         (74 letters)



>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of
           glycoprotein Ib alpha {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 266

 Score = 25.8 bits (55), Expect = 1.0
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 17  VFLSLKKDMYLGWDNNSMFILKQEFFIFMMEKLVCL----LLCVCGMLWFS 63
           +   L+    L    NS++ + + FF   +     L     LC C +L+F 
Sbjct: 167 LLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEILYFR 217


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.338    0.148    0.494 

Gapped
Lambda     K      H
   0.267   0.0400    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 280,819
Number of extensions: 10062
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 1
Length of query: 74
Length of database: 2,407,596
Length adjustment: 41
Effective length of query: 33
Effective length of database: 1,844,666
Effective search space: 60873978
Effective search space used: 60873978
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 47 (22.7 bits)