HHsearch alignment of GI: 254780236 and MMDB domain: 3i1n_N_
>3i1n_N (N:) 50S ribosomal protein L17; ribosome structure, protein-RNA complex, acetylation, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA- binding, methylation; 3.19A {Escherichia coli k-12} PDB: 1p85_L 1p86_L 1vs8_N 2aw4_N 2awb_N 1vs6_N 2i2v_N 2j28_N 2i2t_N* 2qao_N* 2qba_N* 2qbc_N* 2qbe_N 2qbg_N 2qbi_N* 2qbk_N* 2qov_N 2qox_N 2qoz_N* 2qp1_N* ...
Probab=100.00 E-value=0 Score=338.64 Aligned_cols=125 Identities=56% Similarity=0.854 Sum_probs=123.0
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 99888899999788999999999999998689378759999998864216762311387677889998725668899999
Q gi|254780236|r 1 MRHAISGRKLNRTSSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSLRLAISKIGDVDVVNKLF 80 (136)
Q Consensus 1 MrH~~~~rklgr~~~hR~allrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~rr~~~~~l~~~~~v~kLf 80 (136)
|||+++++||||++|||++||+||+++||+||+|+||++||||+|+|||+|||+||+|++|++|++.+||.|+++++|||
T Consensus 1 Mrh~~~~~klgr~~~hR~allrnl~t~Li~herI~TT~~KAkelr~~aEklIt~AK~~~~~~~r~~~~~L~~k~~v~KLf 80 (127)
T 3i1n_N 1 MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLF 80 (127)
T ss_dssp CCTTCCCCCTTSCHHHHHHHHHHHHHHHHHHSEEEEEHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHH
T ss_conf 99988889999880999999999999999759767659999999999999998732565777788750246889999999
Q ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf 999988505877559987537899988757999952688662225
Q gi|254780236|r 81 GIIAKRYSDRSGGYLRIMKRGFRYGDSAPMAVIEFVDRDLSAKGT 125 (136)
Q Consensus 81 ~~l~prf~~R~GGYTRi~kl~~R~gD~A~ma~iElVd~~~~~~~~ 125 (136)
++|+|||+|||||||||+|+++|.||+|+||+|||||+|.++.+.
T Consensus 81 ~~l~pRy~~R~gGYTRi~kl~~R~GD~A~maiiElvd~~~~~~~~ 125 (127)
T 3i1n_N 81 NELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEKAEAA 125 (127)
T ss_dssp HTHHHHTTTCSSCCEEEEECCCCTTTCCCEEEEEESCCCC-----
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCC
T ss_conf 998798648898978887468999988786899971488765657