Query gi|254780236|ref|YP_003064649.1| 50S ribosomal protein L17 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 136
No_of_seqs 117 out of 1412
Neff 4.8
Searched_HMMs 33803
Date Mon May 23 23:16:56 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780236.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >3i1n_N 50S ribosomal protein 100.0 0 0 338.6 15.4 125 1-125 1-125 (127)
2 >2zjr_K 50S ribosomal protein 100.0 0 0 325.5 12.5 116 1-116 1-116 (116)
3 >1gd8_A 50S ribosomal protein 100.0 0 0 325.3 11.6 117 1-117 1-118 (118)
4 >3bbo_P Ribosomal protein L17; 100.0 0 0 327.2 9.2 116 1-116 90-205 (205)
5 >2cqm_A Ribosomal protein L17 100.0 0 0 301.3 7.7 117 13-129 1-119 (122)
6 >2zc0_A Alanine glyoxylate tra 28.9 41 0.0012 14.9 2.6 70 37-106 22-94 (154)
7 >1t6s_A Conserved hypothetical 21.6 57 0.0017 14.1 4.5 54 41-97 5-62 (85)
8 >3h0d_A CTSR; protein DNA comp 18.3 57 0.0017 14.0 1.5 54 46-102 9-74 (82)
9 >1xd7_A YWNA; structural genom 13.8 87 0.0026 13.0 4.5 46 50-95 14-64 (145)
10 >2opa_A Probable tautomerase Y 9.3 1.2E+02 0.0037 12.1 2.8 21 11-31 10-30 (47)
No 1
>>3i1n_N 50S ribosomal protein L17; ribosome structure, protein-RNA complex, acetylation, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA- binding, methylation; 3.19A {Escherichia coli k-12} PDB: 1p85_L 1p86_L 1vs8_N 2aw4_N 2awb_N 1vs6_N 2i2v_N 2j28_N 2i2t_N* 2qao_N* 2qba_N* 2qbc_N* 2qbe_N 2qbg_N 2qbi_N* 2qbk_N* 2qov_N 2qox_N 2qoz_N* 2qp1_N* ... (N:)
Probab=100.00 E-value=0 Score=338.64 Aligned_cols=125 Identities=56% Similarity=0.854 Sum_probs=123.0
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 99888899999788999999999999998689378759999998864216762311387677889998725668899999
Q gi|254780236|r 1 MRHAISGRKLNRTSSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSLRLAISKIGDVDVVNKLF 80 (136)
Q Consensus 1 MrH~~~~rklgr~~~hR~allrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~rr~~~~~l~~~~~v~kLf 80 (136)
|||+++++||||++|||++||+||+++||+||+|+||++||||+|+|||+|||+||+|++|++|++.+||.|+++++|||
T Consensus 1 Mrh~~~~~klgr~~~hR~allrnl~t~Li~herI~TT~~KAkelr~~aEklIt~AK~~~~~~~r~~~~~L~~k~~v~KLf 80 (127)
T 3i1n_N 1 MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLF 80 (127)
T ss_dssp CCTTCCCCCTTSCHHHHHHHHHHHHHHHHHHSEEEEEHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHH
T ss_conf 99988889999880999999999999999759767659999999999999998732565777788750246889999999
Q ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf 999988505877559987537899988757999952688662225
Q gi|254780236|r 81 GIIAKRYSDRSGGYLRIMKRGFRYGDSAPMAVIEFVDRDLSAKGT 125 (136)
Q Consensus 81 ~~l~prf~~R~GGYTRi~kl~~R~gD~A~ma~iElVd~~~~~~~~ 125 (136)
++|+|||+|||||||||+|+++|.||+|+||+|||||+|.++.+.
T Consensus 81 ~~l~pRy~~R~gGYTRi~kl~~R~GD~A~maiiElvd~~~~~~~~ 125 (127)
T 3i1n_N 81 NELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEKAEAA 125 (127)
T ss_dssp HTHHHHTTTCSSCCEEEEECCCCTTTCCCEEEEEESCCCC-----
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCC
T ss_conf 998798648898978887468999988786899971488765657
No 2
>>2zjr_K 50S ribosomal protein L17; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} (K:)
Probab=100.00 E-value=0 Score=325.49 Aligned_cols=116 Identities=51% Similarity=0.757 Sum_probs=115.6
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 99888899999788999999999999998689378759999998864216762311387677889998725668899999
Q gi|254780236|r 1 MRHAISGRKLNRTSSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSLRLAISKIGDVDVVNKLF 80 (136)
Q Consensus 1 MrH~~~~rklgr~~~hR~allrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~rr~~~~~l~~~~~v~kLf 80 (136)
|||+++++||||+++||++||+||+++||+||+|+||++||||+|+|||+|||+||+||+|++|++.+||.|+++++|||
T Consensus 1 Mrh~~~~rklgr~~~hR~allrnl~t~Li~herI~TT~~KAke~r~~aEklIt~AK~~~~~~rr~a~~~L~~~~~v~KLf 80 (116)
T 2zjr_K 1 MRHGKAGRKLNRNSSARVALARAQATALLREGRIQTTLTKAKELRPFVEQLITTAKGGDLHSRRLVAQDIHDKDVVRKVM 80 (116)
T ss_dssp --CCCCCCCCSSCTTHHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHHHHHHTTCSHHHHHHHTTSCCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHH
T ss_conf 99988889999783999999999999999679799558999888899999982022687244321000145589999999
Q ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEE
Q ss_conf 999988505877559987537899988757999952
Q gi|254780236|r 81 GIIAKRYSDRSGGYLRIMKRGFRYGDSAPMAVIEFV 116 (136)
Q Consensus 81 ~~l~prf~~R~GGYTRi~kl~~R~gD~A~ma~iElV 116 (136)
++|+|||+|||||||||+|+|+|.||+|+||+||||
T Consensus 81 ~~l~pRy~~R~gGYTRi~kl~~R~gD~A~maiiElV 116 (116)
T 2zjr_K 81 DEVAPKYAERPGGYTRILRVGTRRGDGVTMALIELV 116 (116)
T ss_dssp HTHHHHTTTSCSCCCEEEECCCCTTTCCCEEEEEC-
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEC
T ss_conf 998799637998878888789999999886899849
No 3
>>1gd8_A 50S ribosomal protein L17; two domains, ribosomal protein S8-like domain, Trp repressor-like domain, helix-turn-helix motif; 2.30A {Thermus thermophilus} (A:)
Probab=100.00 E-value=0 Score=325.32 Aligned_cols=117 Identities=54% Similarity=0.852 Sum_probs=115.8
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 99888899999788999999999999998689378759999998864216762311387677889998725668899999
Q gi|254780236|r 1 MRHAISGRKLNRTSSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSLRLAISKIGDVDVVNKLF 80 (136)
Q Consensus 1 MrH~~~~rklgr~~~hR~allrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~rr~~~~~l~~~~~v~kLf 80 (136)
|||++++++|||+++||++|||||+++||+||+|+||++||||+|+|||+|||+||+|++|++|++.+||.|++++.|||
T Consensus 1 Mrh~~~~~kl~R~~~hR~allrnl~t~Li~herI~TT~~KAke~r~~aEklIt~aK~~~~~~rr~~~~~L~d~~~v~KLf 80 (118)
T 1gd8_A 1 MRHLKSGRKLNRHSSHRLALYRNQAKSLLTHGRITTTVPKAKELRGFVDHLIHLAKRGDLHARRLVLRDLQDVKLVRKLF 80 (118)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHSEEEEEHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHSCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH
T ss_conf 99988899999880999999999999998579488368999999999999999986386889999872247899999999
Q ss_pred HHHHHHHCCCCCCEEEEEECCC-CCCCCCCEEEEEEEC
Q ss_conf 9999885058775599875378-999887579999526
Q gi|254780236|r 81 GIIAKRYSDRSGGYLRIMKRGF-RYGDSAPMAVIEFVD 117 (136)
Q Consensus 81 ~~l~prf~~R~GGYTRi~kl~~-R~gD~A~ma~iElVd 117 (136)
++|+|||++||||||||+|+|+ |.||+|+||+|||||
T Consensus 81 ~~l~pRy~~R~GGYTRi~kl~~rR~gD~A~maiiElVd 118 (118)
T 1gd8_A 81 DEIAPRYRDRQGGYTRVLKLAERRRGDGAPLALVELVE 118 (118)
T ss_dssp HTHHHHTSSCCSCCEEEEEEEEECTTTCCEEEEEEECC
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEC
T ss_conf 99999973689886888846999999998777998429
No 4
>>3bbo_P Ribosomal protein L17; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Nicotiana tabacum} (P:)
Probab=100.00 E-value=0 Score=327.21 Aligned_cols=116 Identities=40% Similarity=0.662 Sum_probs=115.6
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 99888899999788999999999999998689378759999998864216762311387677889998725668899999
Q gi|254780236|r 1 MRHAISGRKLNRTSSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSLRLAISKIGDVDVVNKLF 80 (136)
Q Consensus 1 MrH~~~~rklgr~~~hR~allrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~rr~~~~~l~~~~~v~kLf 80 (136)
|||+++++||||+++||++|||||+++||+||||+||++||||+|+|||+|||+||+|++|++|++.+||.|+++++|||
T Consensus 90 MrH~~k~rKLgR~~shR~aLLRnLvTsLI~heRIeTT~aKAKElR~~aEkLITlAK~g~~harR~a~~~L~dk~lv~KLF 169 (205)
T 3bbo_P 90 MRHGRKVPKLNRPPDQRRALLRGLTTQLLKHGRIKTTKARARAVRKYVDKMITMAKDGSLHKRRQALGFIYEKQIVHALF 169 (205)
T ss_dssp CCTTCCSCCTTSCGGGHHHHHHHHHHHHHHTSCEEECHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHTTCCCTTHHHHHT
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 22787678899885999999999999999769799658989888888999987612345778899998565589999999
Q ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEE
Q ss_conf 999988505877559987537899988757999952
Q gi|254780236|r 81 GIIAKRYSDRSGGYLRIMKRGFRYGDSAPMAVIEFV 116 (136)
Q Consensus 81 ~~l~prf~~R~GGYTRi~kl~~R~gD~A~ma~iElV 116 (136)
++|+|||+|||||||||+|+++|.||+|+||+||||
T Consensus 170 ~eiapRY~dR~GGYTRIiKl~~R~GD~A~MAiIELV 205 (205)
T 3bbo_P 170 AEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 205 (205)
T ss_dssp TSSGGGGSSCCSCCEECCBCSCCSSSCCCCEEEEEC
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEC
T ss_conf 998798677998846678788999998886899859
No 5
>>2cqm_A Ribosomal protein L17 isolog; alpha and beta (A+B), structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=100.00 E-value=0 Score=301.33 Aligned_cols=117 Identities=32% Similarity=0.499 Sum_probs=111.1
Q ss_pred CHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHH--HHHHHHHCCHHHHHHHHHHHHHHHCCC
Q ss_conf 889999999999999986893787599999988642167623113876778--899987256688999999999885058
Q gi|254780236|r 13 TSSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSL--RLAISKIGDVDVVNKLFGIIAKRYSDR 90 (136)
Q Consensus 13 ~~~hR~allrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~r--r~~~~~l~~~~~v~kLf~~l~prf~~R 90 (136)
+++||++|||||+++||+||+|+||++||||+|+|+|+|||+||+|++|++ +++.+||.|+++++|||++|+|||++|
T Consensus 1 ~~~hR~~llrnl~t~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~r~~~~~~~~l~~~~~v~KLf~~lapRy~~r 80 (122)
T 2cqm_A 1 GSSGSSGLLRNLLTGLVRHERIEAPWARVDEMRGYAEKLIDYGKLGDTNERAMRMADFWLTEKDLIPKLFQVLAPRYKDQ 80 (122)
T ss_dssp CCCCCSSHHHHHHHHHHHTTEEEEEHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHCCCTTHHHHHHTTHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 96589999999999999739799648999888877888888860486266788876402664889998999880798707
Q ss_pred CCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCHH
Q ss_conf 775599875378999887579999526886622254025
Q gi|254780236|r 91 SGGYLRIMKRGFRYGDSAPMAVIEFVDRDLSAKGTPVSR 129 (136)
Q Consensus 91 ~GGYTRi~kl~~R~gD~A~ma~iElVd~~~~~~~~~~~~ 129 (136)
|||||||+|+|+|.||+|+||+|||||+|++++..+.++
T Consensus 81 ~GGYTRI~kl~~R~gD~A~maiiElvd~~~~~~~~~~~~ 119 (122)
T 2cqm_A 81 TGGYTRMLQIPNRSLDRAKMAVIEYKGNCLPPLPLPSGP 119 (122)
T ss_dssp CSCCEEEEEECCCSSSCCCEEEEEESSCCCCCCCCCCSS
T ss_pred CCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCC
T ss_conf 876689886378888878879999689989988999999
No 6
>>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea; HET: PMP; 2.30A {Thermococcus litoralis} (A:1-45,A:299-407)
Probab=28.93 E-value=41 Score=14.91 Aligned_cols=70 Identities=16% Similarity=0.112 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHCCHHHHHHHHHHHHH--HHCCCCCCEEEEEECCCCCCC
Q ss_conf 5999999886421676231138-767788999872566889999999998--850587755998753789998
Q gi|254780236|r 37 TLPKAKELRPIVEKLVTLGKKG-GLHSLRLAISKIGDVDVVNKLFGIIAK--RYSDRSGGYLRIMKRGFRYGD 106 (136)
Q Consensus 37 T~~KAKelr~~aEklIt~AK~~-~~~~rr~~~~~l~~~~~v~kLf~~l~p--rf~~R~GGYTRi~kl~~R~gD 106 (136)
..-||-|+|..--+||++|--+ |-|-.++-..+-...+.+...+++..| .+..-.|||.=.+++..-..+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~hl~~lr~~y~~Rr~~l~~~L~~~~~~i~~~~p~gG~~lwl~lp~~~~~ 94 (154)
T 2zc0_A 22 VMKKASELQKKGVKLISLAAGDPDYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGADG 94 (154)
T ss_dssp HHHHHHHHHHSSCCCEECCSCCCCHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTTCCH
T ss_pred HHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCCCCH
T ss_conf 9999999996799808888956891012344446666678765665127772562689725999989999899
No 7
>>1t6s_A Conserved hypothetical protein; A winged helix-turn-helix, structural genomics, BSGC structure funded by NIH; 1.95A {Chlorobium tepidum tls} (A:1-85)
Probab=21.58 E-value=57 Score=14.08 Aligned_cols=54 Identities=9% Similarity=0.065 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHCCC-CHHHHHHHHHHH---CCHHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 999886421676231138-767788999872---566889999999998850587755998
Q gi|254780236|r 41 AKELRPIVEKLVTLGKKG-GLHSLRLAISKI---GDVDVVNKLFGIIAKRYSDRSGGYLRI 97 (136)
Q Consensus 41 AKelr~~aEklIt~AK~~-~~~~rr~~~~~l---~~~~~v~kLf~~l~prf~~R~GGYTRi 97 (136)
-+++...+|=++..+-.+ ++. .+...+ .+++.+..+.+++..+|.+.+.|+.=+
T Consensus 5 ~~~~~~~iEAlLf~~gepls~~---~L~~~l~~~i~~~~i~~~l~~L~~~y~~~~rgi~l~ 62 (85)
T 1t6s_A 5 RQQLLRSLEALIFSSEEPVNLQ---TLSQITAHKFTPSELQEAVDELNRDYEATGRTFRIH 62 (85)
T ss_dssp HHHHHHHHHHHHHHCSSCBCHH---HHHHHTTCCCCHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHHCCCCCCHH---HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 8999999999997638988999---999986658999999999999999865156646999
No 8
>>3h0d_A CTSR; protein DNA complex, winged HTH domain, 4-helix bundle, DNA tandem repeat, transcription/DNA complex; HET: DNA; 2.40A {Bacillus stearothermophilus} (A:1-76,A:150-155)
Probab=18.32 E-value=57 Score=14.05 Aligned_cols=54 Identities=20% Similarity=0.311 Sum_probs=26.1
Q ss_pred HHHHHHHHHHCCCCHHHHHH-HHHHH-CCHHHHHHHHHHHHHHHCCCC----------CCEEEEEECCC
Q ss_conf 64216762311387677889-99872-566889999999998850587----------75599875378
Q gi|254780236|r 46 PIVEKLVTLGKKGGLHSLRL-AISKI-GDVDVVNKLFGIIAKRYSDRS----------GGYLRIMKRGF 102 (136)
Q Consensus 46 ~~aEklIt~AK~~~~~~rr~-~~~~l-~~~~~v~kLf~~l~prf~~R~----------GGYTRi~kl~~ 102 (136)
.|.-.|+..+-.+.+.-+|- +...+ +-+.-+. =+|.-||..-+ |||-||.|+..
T Consensus 9 ~yik~~l~~s~~~~ieI~R~elA~~F~CvPSQIN---YVl~TRFT~e~GY~VESkRGGGGyIRI~kv~~ 74 (82)
T 3h0d_A 9 QYLKQVLNXSDQDIVEIKRSEIANKFRCVPSQIN---YVINTRFTLERGYIVESKRGGGGYIRIXKVKT 74 (82)
T ss_dssp HHHHHHHTTSSSSEEEECHHHHHHHTTSCTHHHH---HHHHHHSSGGGTEEEEEECSTTCEEEEEEEEE
T ss_pred HHHHHHHHHCCCCEEEEEHHHHHHHCCCCCCCCC---EEECCCCCCCCCEEEEEECCCCCEEEEEEECC
T ss_conf 9999999748799399627988984696741161---66525515888859986428985599999566
No 9
>>1xd7_A YWNA; structural genomics, protein structure initiative, winged helix DNA binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} (A:)
Probab=13.81 E-value=87 Score=12.97 Aligned_cols=46 Identities=20% Similarity=0.146 Sum_probs=34.0
Q ss_pred HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH-----HCCCCCCEE
Q ss_conf 6762311387677889998725668899999999988-----505877559
Q gi|254780236|r 50 KLVTLGKKGGLHSLRLAISKIGDVDVVNKLFGIIAKR-----YSDRSGGYL 95 (136)
Q Consensus 50 klIt~AK~~~~~~rr~~~~~l~~~~~v~kLf~~l~pr-----f~~R~GGYT 95 (136)
=|+.+|..+.+.+.-++...=-++..+.+++..|... ..++.|||.
T Consensus 14 ~l~~La~~~~~s~~~Iae~~~i~~~~l~kil~~L~~~gli~s~rG~~GGy~ 64 (145)
T 1xd7_A 14 ILSLISMDEKTSSEIIADSVNTNPVVVRRMISLLKKADILTSRAGVPGASL 64 (145)
T ss_dssp HHHHHHTCSCCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEECCSSSSSCEE
T ss_pred HHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCEE
T ss_conf 999985499989999998869399999999999988790773689989723
No 10
>>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2- fluoro-P-hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A* (A:1-47)
Probab=9.31 E-value=1.2e+02 Score=12.08 Aligned_cols=21 Identities=10% Similarity=0.291 Sum_probs=16.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHC
Q ss_conf 978899999999999999868
Q gi|254780236|r 11 NRTSSHRKAMFSNMAASIIWH 31 (136)
Q Consensus 11 gr~~~hR~allrnl~~~Li~h 31 (136)
||+..|.++|.+.+..++.++
T Consensus 10 Grt~eQK~~l~~~iT~a~~~~ 30 (47)
T 2opa_A 10 GRTDEQKRNLVEKVTEAVKET 30 (47)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999998
Done!