HHsearch results for GI: 254780236 and protein with PDBid: 2cqm_A
>2cqm_A Ribosomal protein L17 isolog; alpha and beta (A+B), structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.188.1.1 PDB: 2ftc_J 3iy9_S
Probab=100.00 E-value=0 Score=301.77 Aligned_cols=118 Identities=32% Similarity=0.495 Sum_probs=112.2
Q ss_pred CHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHH--HHHHHHHCCHHHHHHHHHHHHHHHCCC
Q ss_conf 889999999999999986893787599999988642167623113876778--899987256688999999999885058
Q gi|254780236|r 13 TSSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSL--RLAISKIGDVDVVNKLFGIIAKRYSDR 90 (136)
Q Consensus 13 ~~~hR~allrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~r--r~~~~~l~~~~~v~kLf~~l~prf~~R 90 (136)
.||||+||||||+++||+||+|+||++||||+|+|+|+|||+||+|++|++ +++.+||.|+++++|||++|+|||++|
T Consensus 1 gsshR~allrnl~tsLi~herI~TT~~KAKelr~~~EkLIt~aK~g~~~~r~~r~~~~~l~~~~~v~KLf~~lapRy~~R 80 (122)
T 2cqm_A 1 GSSGSSGLLRNLLTGLVRHERIEAPWARVDEMRGYAEKLIDYGKLGDTNERAMRMADFWLTEKDLIPKLFQVLAPRYKDQ 80 (122)
T ss_dssp CCCCCSSHHHHHHHHHHHTTEEEEEHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHCCCTTHHHHHHTTHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCHHHCCC
T ss_conf 96589999999999999759799778999999999999999985476341999999875265889999999756464378
Q ss_pred CCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
Q ss_conf 7755998753789998875799995268866222540256
Q gi|254780236|r 91 SGGYLRIMKRGFRYGDSAPMAVIEFVDRDLSAKGTPVSRK 130 (136)
Q Consensus 91 ~GGYTRi~kl~~R~gD~A~ma~iElVd~~~~~~~~~~~~~ 130 (136)
|||||||+|+|+|.||+|+||+|||||+|+++.+.|.+..
T Consensus 81 ~GGYTRI~k~~~R~gD~A~ma~iElv~~~~pp~~~~~~~~ 120 (122)
T 2cqm_A 81 TGGYTRMLQIPNRSLDRAKMAVIEYKGNCLPPLPLPSGPS 120 (122)
T ss_dssp CSCCEEEEEECCCSSSCCCEEEEEESSCCCCCCCCCCSSC
T ss_pred CCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
T ss_conf 9875888865799998888899996899899889999999