HHsearch results for GI: 254780236 and protein with PDBid: 3ofq_N

>3ofq_N 50S ribosomal protein L17; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 3fik_N 2wwq_N 3ofr_N* 3i1n_N 1p85_L 1p86_L 1vs8_N 1vs6_N 2aw4_N 2awb_N 1vt2_N 2i2v_N 2j28_N 2i2t_N* 2qao_N* 2qba_N* 2qbc_N* 2qbe_N 2qbg_N 2qbi_N* ...
Probab=100.00  E-value=0  Score=336.32  Aligned_cols=120  Identities=58%  Similarity=0.876  Sum_probs=118.7

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             99888899999788999999999999998689378759999998864216762311387677889998725668899999
Q gi|254780236|r    1 MRHAISGRKLNRTSSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSLRLAISKIGDVDVVNKLF   80 (136)
Q Consensus         1 MrH~~~~rklgr~~~hR~allrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~rr~~~~~l~~~~~v~kLf   80 (136)
                      |||+++++||||+++||++||+||+++||+||+|+||++||||+|+++|+|||+||+|+++++|++.+++.|++++.|||
T Consensus         1 MrH~~~~rkLgr~~~hR~allrnl~t~Li~~erI~TT~~KAKe~r~~~EklIt~aK~~~~~~rr~~~~~l~~~~~v~kLf   80 (120)
T 3ofq_N            1 MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLF   80 (120)
T ss_dssp             CCTTCCSCCTTSCSTTTTTSTTTSSTTTTTTSEEEEEHHHHHHHHHHHSHHHHSTTSCSSSTTTHHHHTTCCHHHHHTTT
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH
T ss_conf             99988889999985999999999999999769767759999999999999988714576788999884515889999999


Q ss_pred             HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCC
Q ss_conf             9999885058775599875378999887579999526886
Q gi|254780236|r   81 GIIAKRYSDRSGGYLRIMKRGFRYGDSAPMAVIEFVDRDL  120 (136)
Q Consensus        81 ~~l~prf~~R~GGYTRi~kl~~R~gD~A~ma~iElVd~~~  120 (136)
                      ++|+|||++||||||||+|+|+|.||+|+||+|||||+|.
T Consensus        81 ~~iapry~~R~GGYTRI~klg~R~gD~A~maiiElVd~~e  120 (120)
T 3ofq_N           81 NELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSE  120 (120)
T ss_dssp             TTHHHHTTSCCSCCEECCCCCCCSSSCCCEEEEEETTCCC
T ss_pred             HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCC
T ss_conf             9998885779988478887789999898788999732899