HHSEARCH alignment of GI: 254780236 and SCOP domain: d2qamn1

Alignment
>d2qamn1 d.188.1.1 (N:1-120) Prokaryotic ribosomal protein L17 {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=336.56  Aligned_cols=120  Identities=58%  Similarity=0.876  Sum_probs=118.7

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             99888899999788999999999999998689378759999998864216762311387677889998725668899999
Q gi|254780236|r    1 MRHAISGRKLNRTSSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSLRLAISKIGDVDVVNKLF   80 (136)
Q Consensus         1 MrH~~~~rklgr~~~hR~allrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~rr~~~~~l~~~~~v~kLf   80 (136)
                      |||+++++||||+++||++||+||+++||+||+|+||++||||+|+|+|+|||+||+|+++++|++.+|+.|++++.|||
T Consensus         1 MrH~~~~rklgr~~~hR~allrnl~t~Li~herI~TT~aKAKelr~~~EklIt~aK~~~~~~rr~~~~~l~d~~~v~kLf   80 (120)
T d2qamn1           1 MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLF   80 (120)
T ss_dssp             CCTTCCCCCTTSCTTGGGTTTHHHHHHHHHHSEECCBSHHHHHHHHHHHHHHHHHTSCTTHHHHHHHHSSCCTTHHHHTT
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH
T ss_conf             99988889999983999999999999999749767649999999999999999842577788899871035888999899


Q ss_pred             HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCC
Q ss_conf             9999885058775599875378999887579999526886
Q gi|254780236|r   81 GIIAKRYSDRSGGYLRIMKRGFRYGDSAPMAVIEFVDRDL  120 (136)
Q Consensus        81 ~~l~prf~~R~GGYTRi~kl~~R~gD~A~ma~iElVd~~~  120 (136)
                      ++|+|||++||||||||+|+|+|.||+|+||+|||||+|.
T Consensus        81 ~~iapry~~R~GGYTRI~klg~R~GD~A~maiiElVd~~~  120 (120)
T d2qamn1          81 NELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSE  120 (120)
T ss_dssp             TTHHHHTTTCCSCCEECCCCCCCSSSCCCBCCEEETTCCC
T ss_pred             HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCC
T ss_conf             9987685079988655442689999988878899722899


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Prokaryotic ribosomal protein L17
superfamily: Prokaryotic ribosomal protein L17
family: Prokaryotic ribosomal protein L17
domain: Prokaryotic ribosomal protein L17
species: Escherichia coli [TaxId: 562]