HHsearch alignment of GI: 254780237 and MMDB domain: 1xpp_A_

>1xpp_A (A:) TA1416, DNA-directed RNA polymerase subunit L; structural genomics, protein structure initiative, MCSG; 1.60A {Thermoplasma acidophilum}
Probab=93.60  E-value=0.11  Score=30.63  Aligned_cols=31  Identities=10%  Similarity=0.120  Sum_probs=14.1

Q ss_pred             EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             89999993896177799999999999988876
Q gi|254780237|r  200 KLSMTIDTDGSITGEDSVALASRILQDQLGMF  231 (340)
Q Consensus       200 kL~lEI~TnGsi~P~eAl~~Aa~iL~~~l~~f  231 (340)
                      +..|-|.|+|+ +|.+||..|++-|++.+..|
T Consensus        62 ~~~lrIqT~~~-~p~~al~~A~~~l~~~~~~l   92 (115)
T 1xpp_A           62 NPQIYVRVKSG-KPQSAIKRAVRKLSKLYEDL   92 (115)
T ss_dssp             CCEEEEEESSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC-CHHHHHHHHHHHHHHHHHHH
T ss_conf             71899981899-97999999999999999999