HHsearch alignment of GI: 254780237 and MMDB domain: 3h0g_C_1-38_171-297

>3h0g_C (C:1-38,C:171-297) DNA-directed RNA polymerase II subunit RPB3; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=93.59  E-value=0.071  Score=31.96  Aligned_cols=36  Identities=25%  Similarity=0.471  Sum_probs=32.4

Q ss_pred             CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             218999999389617779999999999998887622
Q gi|254780237|r  198 YDKLSMTIDTDGSITGEDSVALASRILQDQLGMFIN  233 (340)
Q Consensus       198 ~dkL~lEI~TnGsi~P~eAl~~Aa~iL~~~l~~f~~  233 (340)
                      .++.+|.|+|+|++.|++.+.+|.++|+.-+..|.+
T Consensus        94 ~d~FiF~VES~Gsl~p~~Iv~~Al~iLk~K~~~l~~  129 (165)
T 3h0g_C           94 PRRFYMDVESVGSIPPNEIMVQGLRILQEKLAVLVR  129 (165)
T ss_dssp             CCCEEEEEEBCSSSCTTTTTHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             878999999505659999999999999999999998