HHsearch alignment of GI: 254780237 and MMDB domain: 3h0g_C_1-38_171-297

>3h0g_C (C:1-38,C:171-297) DNA-directed RNA polymerase II subunit RPB3; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}

Probab=92.68  E-value=0.1  Score=30.94  Aligned_cols=38  Identities=18%  Similarity=0.274  Sum_probs=29.9

Q ss_pred             ECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             636788815899996169756678889999987416983068
Q gi|254780237|r   19 VLGQEEENRTLMIAEPLPRGFAHTLGNALRRVLMSSLRGAAI   60 (340)
Q Consensus        19 ~~~~~~~~~g~f~~~Ple~G~g~TlGNaLRRvLLssi~G~ai   60 (340)
                      .+.+.++.+-+|.+.    |--..++|||||+|++=.|-+++
T Consensus         8 ~i~e~~~~~i~F~l~----~vd~s~ANalRRimiaWsPV~~a   45 (165)
T 3h0g_C            8 TIRNISKNSVDFVLT----NTSLAVANSLRRVVLAWSPTSAV   45 (165)
T ss_dssp             CCCCBCSSEEEEEEC----SCCHHHHHHHHHHHHSSCCBCCC
T ss_pred             EEEECCCCEEEEEEE----CCCHHHHHHHHHHHHHECCCEEE
T ss_conf             999856988999997----89837888999999876332025